Click here to switch to the map view.

The map label for this gene is ynbB [H]

Identifier: 126697198

GI number: 126697198

Start: 1586628

End: 1587920

Strand: Reverse

Name: ynbB [H]

Synonym: P9301_18601

Alternate gene names: 126697198

Gene position: 1587920-1586628 (Counterclockwise)

Preceding gene: 126697199

Following gene: 126697197

Centisome position: 96.71

GC content: 33.8

Gene sequence:

>1293_bases
ATGACTCTTGACAATAACTTAAAACTGGCTGAAAACGCTGTTCTTTCTGTCGAAGAGAGTTTAAGTAAAGTTTTCCAAGA
AAGGTCCAATCAGGTTTTCCAGAAATTAGAAAATATTTTGACAATTTTTAAGGAAGAAAAAGTTTCTACTAGTCATTTCA
ATCAATCTTCTGGTAGTGGTCATGATGATATATCTAGAGAAAAAATTGATGCGGTTTTTGCAAGATTGTTTCTTGCTGAA
AAGGCTGCTGTGAGGATGCAATTTGTAAGTGGAACCCATGCAATAAGTTCTGTCTTATTTGGAATTCTTCGACCTGGAGA
TGTAATGTTATCTCTTACAGGACAACCATATGACACGTTAGAAGAAGTCATAGGAATAAGGGGAGTAGGAAAAGGGTCAC
TTAAAGATTTTGACATTGAATATAAGCAAGTAAATATCTGCGAGAATTTTGATTCTTTTGAAGAAAAAATTGTTCATTTT
TTTAAAGAAAATTCATGCAAATTAGTATTCATACAAAAAAGTTGTGGATATAGTTGGAGAAAGTCTCTCACGAATCATCA
GATAGAGAAAATTTGTAGTCTTATTCATTCTCTTGATCCTAACTGTATATGTTTTGTTGATAACTGTTATGGGGAGCTTG
TTGAAGATAGTGAACCAATTTCTAAAGGGGCAAATATAATTGCTGGATCATTGATTAAAAATTTGGGAGGAACAATAGTT
CCTACTGGCGGGTACGTTGCAGGAGATGCAGAGTTGGTTGAGATGGCATGTTCTAGATTAACCTCACCAGGCATTGGTTC
TTCTGCAGGAATAAATTTTGGACTAGGAAGATTAATTTTGCAGGGTTTGTTTTTAGCACCACAAATTGTTCACGAATCAC
TTAAAGGTGCTGATATGGTCGCAGCAGTCTTTAAAAATTTGGGATTTAAGGTTTTACCAGAGCCAGCAACTTATAGATCT
GATCTTATTCAGTCAGTAAGATTGAATAATCCATATTTGGTACAAAAAGTTTGTCAATCTTTTCAAAATTCTTCACCAGT
AGATTCTTTTCTGAATGTTGTTCCATCATCAATGGATGGATATGATTCAAAATTATTAATGGCAGGAGGTACCTTTATTG
AAGGTAGTACAAGTGAATTTTCTGCTGATGCCCCTCTAAGAGATCCTTACAATATTTTTGTTCAAGGTGGTTCTAACATA
GCTCACATCAAAATTGCATTAATTCGATTATTATCTGAATTACTACAGGAAAAATTAATTTCAAAGGATTCTCTACTTCC
TTTATCTACTTAA

Upstream 100 bases:

>100_bases
TTCAAAAAAACTTTCTTATTTTCAGGGCAGGGGACCTAATGCTTTCCTCGTAGAATTAAGAAATTTAGCTTCTGAAAAAT
AACATTAAATTTCATAATAA

Downstream 100 bases:

>100_bases
TCATGTCTTACAAATTTCCAGACAACCTCAACTATGCTGATACTCATGAATATGTCTTGGAAGAAAATGGATTATTAAAA
ATTGGAGTTAGTGAATTCGC

Product: cystathionine beta-lyase family aluminum resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 430; Mature: 429

Protein sequence:

>430_residues
MTLDNNLKLAENAVLSVEESLSKVFQERSNQVFQKLENILTIFKEEKVSTSHFNQSSGSGHDDISREKIDAVFARLFLAE
KAAVRMQFVSGTHAISSVLFGILRPGDVMLSLTGQPYDTLEEVIGIRGVGKGSLKDFDIEYKQVNICENFDSFEEKIVHF
FKENSCKLVFIQKSCGYSWRKSLTNHQIEKICSLIHSLDPNCICFVDNCYGELVEDSEPISKGANIIAGSLIKNLGGTIV
PTGGYVAGDAELVEMACSRLTSPGIGSSAGINFGLGRLILQGLFLAPQIVHESLKGADMVAAVFKNLGFKVLPEPATYRS
DLIQSVRLNNPYLVQKVCQSFQNSSPVDSFLNVVPSSMDGYDSKLLMAGGTFIEGSTSEFSADAPLRDPYNIFVQGGSNI
AHIKIALIRLLSELLQEKLISKDSLLPLST

Sequences:

>Translated_430_residues
MTLDNNLKLAENAVLSVEESLSKVFQERSNQVFQKLENILTIFKEEKVSTSHFNQSSGSGHDDISREKIDAVFARLFLAE
KAAVRMQFVSGTHAISSVLFGILRPGDVMLSLTGQPYDTLEEVIGIRGVGKGSLKDFDIEYKQVNICENFDSFEEKIVHF
FKENSCKLVFIQKSCGYSWRKSLTNHQIEKICSLIHSLDPNCICFVDNCYGELVEDSEPISKGANIIAGSLIKNLGGTIV
PTGGYVAGDAELVEMACSRLTSPGIGSSAGINFGLGRLILQGLFLAPQIVHESLKGADMVAAVFKNLGFKVLPEPATYRS
DLIQSVRLNNPYLVQKVCQSFQNSSPVDSFLNVVPSSMDGYDSKLLMAGGTFIEGSTSEFSADAPLRDPYNIFVQGGSNI
AHIKIALIRLLSELLQEKLISKDSLLPLST
>Mature_429_residues
TLDNNLKLAENAVLSVEESLSKVFQERSNQVFQKLENILTIFKEEKVSTSHFNQSSGSGHDDISREKIDAVFARLFLAEK
AAVRMQFVSGTHAISSVLFGILRPGDVMLSLTGQPYDTLEEVIGIRGVGKGSLKDFDIEYKQVNICENFDSFEEKIVHFF
KENSCKLVFIQKSCGYSWRKSLTNHQIEKICSLIHSLDPNCICFVDNCYGELVEDSEPISKGANIIAGSLIKNLGGTIVP
TGGYVAGDAELVEMACSRLTSPGIGSSAGINFGLGRLILQGLFLAPQIVHESLKGADMVAAVFKNLGFKVLPEPATYRSD
LIQSVRLNNPYLVQKVCQSFQNSSPVDSFLNVVPSSMDGYDSKLLMAGGTFIEGSTSEFSADAPLRDPYNIFVQGGSNIA
HIKIALIRLLSELLQEKLISKDSLLPLST

Specific function: Unknown

COG id: COG4100

COG function: function code P; Cystathionine beta-lyase family protein involved in aluminum resistance

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009651
- InterPro:   IPR015424
- InterPro:   IPR015421 [H]

Pfam domain/function: PF06838 Alum_res [H]

EC number: NA

Molecular weight: Translated: 47025; Mature: 46894

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLDNNLKLAENAVLSVEESLSKVFQERSNQVFQKLENILTIFKEEKVSTSHFNQSSGSG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCC
HDDISREKIDAVFARLFLAEKAAVRMQFVSGTHAISSVLFGILRPGDVMLSLTGQPYDTL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHH
EEVIGIRGVGKGSLKDFDIEYKQVNICENFDSFEEKIVHFFKENSCKLVFIQKSCGYSWR
HHHHCCCCCCCCCCCCCCCCHHEEHHHHCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHH
KSLTNHQIEKICSLIHSLDPNCICFVDNCYGELVEDSEPISKGANIIAGSLIKNLGGTIV
HHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHCCCCCHHHCHHHHHHHHHHHCCCCEE
PTGGYVAGDAELVEMACSRLTSPGIGSSAGINFGLGRLILQGLFLAPQIVHESLKGADMV
CCCCEECCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHH
AAVFKNLGFKVLPEPATYRSDLIQSVRLNNPYLVQKVCQSFQNSSPVDSFLNVVPSSMDG
HHHHHHCCCEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCC
YDSKLLMAGGTFIEGSTSEFSADAPLRDPYNIFVQGGSNIAHIKIALIRLLSELLQEKLI
CCCEEEEECCCEECCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHC
SKDSLLPLST
CCCCCCCCCC
>Mature Secondary Structure 
TLDNNLKLAENAVLSVEESLSKVFQERSNQVFQKLENILTIFKEEKVSTSHFNQSSGSG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCC
HDDISREKIDAVFARLFLAEKAAVRMQFVSGTHAISSVLFGILRPGDVMLSLTGQPYDTL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHH
EEVIGIRGVGKGSLKDFDIEYKQVNICENFDSFEEKIVHFFKENSCKLVFIQKSCGYSWR
HHHHCCCCCCCCCCCCCCCCHHEEHHHHCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHH
KSLTNHQIEKICSLIHSLDPNCICFVDNCYGELVEDSEPISKGANIIAGSLIKNLGGTIV
HHHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHCCCCCHHHCHHHHHHHHHHHCCCCEE
PTGGYVAGDAELVEMACSRLTSPGIGSSAGINFGLGRLILQGLFLAPQIVHESLKGADMV
CCCCEECCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHH
AAVFKNLGFKVLPEPATYRSDLIQSVRLNNPYLVQKVCQSFQNSSPVDSFLNVVPSSMDG
HHHHHHCCCEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHCCCCCCC
YDSKLLMAGGTFIEGSTSEFSADAPLRDPYNIFVQGGSNIAHIKIALIRLLSELLQEKLI
CCCEEEEECCCEECCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHC
SKDSLLPLST
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]