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The map label for this gene is 126697180

Identifier: 126697180

GI number: 126697180

Start: 1565879

End: 1567864

Strand: Reverse

Name: 126697180

Synonym: P9301_18421

Alternate gene names: NA

Gene position: 1567864-1565879 (Counterclockwise)

Preceding gene: 126697181

Following gene: 126697178

Centisome position: 95.49

GC content: 36.86

Gene sequence:

>1986_bases
ATGCAATCAAGTACAAATTCAACTGTAAATAGATCTACTCATGATTCATCTAGATCTAAAAGTAATACGCCAGCTCTACG
AGTAATACCTCTTGGAGGACTACATGAAATAGGAAAAAACACTTGCGTTTTTGAATATGGTGAAGAATTAATGCTTGTTG
ATGCTGGCCTAGCTTTCCCATCTGATGGTATGCATGGCGTAAATGTTGTTATGCCTGACACAACTTTTTTAAAAGAAAAT
CAAAGAAGAATAAAAGGAATGATTGTCACTCACGGGCATGAAGATCACATTGGAGGCATTTCTCATCATCTAAAGCATTT
TAATATTCCGATTATTTATGGCCCAAGACTGGCAATGTCAATGCTTAGAGGAAAAATGGAGGAAGCAGGGGTATCTGATA
GAACAACTATACAGACAGTAAATCCAAGAGATGTTGTAAAAGTAGGACAACATTTTTCCGTTGAATTTATTCGAAATACT
CATTCTATTTGCGATAGCTTTTCTTTAGCAGTTACAACACCTGTTGGTACAATTATTTTCACGGGAGATTTTAAGTTTGA
TCATATGCCAGTAGATGGAGAGCAATTTGATATTGAAAGAATGGTGCATTACGGAGAGAAGGGTGTTTTATGCATGTTCA
GTGATTCGACTAATGCCGAAGTTCCAGGTTTTTGTCCTTCTGAGAAGACTATCTATCCCTCTTTAGAAAAACATATTGCT
GAGGCAAAAGAACGAGTTATCCTTACCACTTTTGCTAGTTCTGTTCATAGAGTGACAATGATCTTAGAATTGGCTATGAA
ACATGGAAGAAAGGTTGGTTTGTTAGGTAGATCGATGATAAATGTCATTGCTAAGGCAAGAGATATTGGTTATATGAAAT
GCCCAGATGATTTGTTTGTTCCTATCAAGCAAATTAGAGATTTGCCAGATAGGGAGACCTTATTATTAATGACGGGAAGC
CAAGGAGAACCCTTAGCAGCGTTAAGCAGAATCTCTCGTGGTGAACATCAGCATGTTCGTCTTAAGACTACTGATACAGT
AATATTCTCAGCCAGCCCAATTCCTGGTAATACTATTTCTGTTGTTAATACAATAGATAGATTAATGAAACTTGGAGCAA
AGGTTGTTTATGGAAAGGGTGAGAATATTCATGTTTCTGGTCATGGTTTTCAAGAAGATCAAAAGTTAATGTTGGCTCTC
GCAAAACCTAAGTTTTTTGTTCCTGTTCATGGAGAACATAGAATGCTTGTTTGTCATGGCAAGAGTGCACAAACTATGGG
GGTTCCTAAGGACAATATCTTAATTATTGAAAATGGAGATGTAGTTGAGTTAACACCTAATTCTATTCAAAAAGGTGATC
CTGTAAAAGCTGGTGTTGAACTGCTTGATAACTCACGAAATGGGATAGTAGATGCTCGAGTGTTGAAGGAAAGGCAGCAA
TTAGCTGGGGATGGTGTAGTAACTGTTTTAGCTCCTATTAGTACAGATGGGAAGATGGTTGCGCCTCCCAGAGTTAATTT
AAGAGGAGTTGTTACTACGGCAGAGCCAAGAAAAATGTCTATGTGGACAGAACGAGAAATAAGCTGGGTCTTAGAAAATA
GATGGAAACAATTATCCAGACAAACTGGTCCGAATAATTTTGAGGTAGATTGGATTGGTGTACAAAGAGAAATTGAAAAT
GGTTTATCGAGAAGAATGAGAAGAGAATTACAAGTTGAACCGCTTATTTTGTGTTTAGTTCAACCTGCTCCAAGTGGAAC
TCGTGCTTATATTCCAAAGATTACCGAAGAGCAAAATTTCTCTAATAGAAATAGAAATAATAATAACTTCCATAAGAAAT
CAAACAATAATCATCCTAATAGTTCAAATAACCCACACAATGCCCAAAAAAGTCCAAAAGGTTCACAGAATCCATCAGCT
GAGACTGTTACAGAAGATTCATTTGAGGGTAGAACTAGAAGAAGAAGATCTGCTGTAACATCTTAA

Upstream 100 bases:

>100_bases
TATCCTGAAATCCCTATAATAGGGATTATATTTAACTTGATAATTAAATTTAAATAAACCTTATTTGATTACAAGCAGGC
CTTCATAAATTTTCAAAATT

Downstream 100 bases:

>100_bases
CTTTTTTCAAAATTTATATAGTTTTTATCCCAAACAATTTTTAAAAACTCTTGAAGATTAATTTGCCCTTTATTTTTTTC
ATAAATTGAAGTTGCCAATT

Product: metallo-beta-lactamase superfamily hydrolase

Products: NA

Alternate protein names: RNase J [H]

Number of amino acids: Translated: 661; Mature: 661

Protein sequence:

>661_residues
MQSSTNSTVNRSTHDSSRSKSNTPALRVIPLGGLHEIGKNTCVFEYGEELMLVDAGLAFPSDGMHGVNVVMPDTTFLKEN
QRRIKGMIVTHGHEDHIGGISHHLKHFNIPIIYGPRLAMSMLRGKMEEAGVSDRTTIQTVNPRDVVKVGQHFSVEFIRNT
HSICDSFSLAVTTPVGTIIFTGDFKFDHMPVDGEQFDIERMVHYGEKGVLCMFSDSTNAEVPGFCPSEKTIYPSLEKHIA
EAKERVILTTFASSVHRVTMILELAMKHGRKVGLLGRSMINVIAKARDIGYMKCPDDLFVPIKQIRDLPDRETLLLMTGS
QGEPLAALSRISRGEHQHVRLKTTDTVIFSASPIPGNTISVVNTIDRLMKLGAKVVYGKGENIHVSGHGFQEDQKLMLAL
AKPKFFVPVHGEHRMLVCHGKSAQTMGVPKDNILIIENGDVVELTPNSIQKGDPVKAGVELLDNSRNGIVDARVLKERQQ
LAGDGVVTVLAPISTDGKMVAPPRVNLRGVVTTAEPRKMSMWTEREISWVLENRWKQLSRQTGPNNFEVDWIGVQREIEN
GLSRRMRRELQVEPLILCLVQPAPSGTRAYIPKITEEQNFSNRNRNNNNFHKKSNNNHPNSSNNPHNAQKSPKGSQNPSA
ETVTEDSFEGRTRRRRSAVTS

Sequences:

>Translated_661_residues
MQSSTNSTVNRSTHDSSRSKSNTPALRVIPLGGLHEIGKNTCVFEYGEELMLVDAGLAFPSDGMHGVNVVMPDTTFLKEN
QRRIKGMIVTHGHEDHIGGISHHLKHFNIPIIYGPRLAMSMLRGKMEEAGVSDRTTIQTVNPRDVVKVGQHFSVEFIRNT
HSICDSFSLAVTTPVGTIIFTGDFKFDHMPVDGEQFDIERMVHYGEKGVLCMFSDSTNAEVPGFCPSEKTIYPSLEKHIA
EAKERVILTTFASSVHRVTMILELAMKHGRKVGLLGRSMINVIAKARDIGYMKCPDDLFVPIKQIRDLPDRETLLLMTGS
QGEPLAALSRISRGEHQHVRLKTTDTVIFSASPIPGNTISVVNTIDRLMKLGAKVVYGKGENIHVSGHGFQEDQKLMLAL
AKPKFFVPVHGEHRMLVCHGKSAQTMGVPKDNILIIENGDVVELTPNSIQKGDPVKAGVELLDNSRNGIVDARVLKERQQ
LAGDGVVTVLAPISTDGKMVAPPRVNLRGVVTTAEPRKMSMWTEREISWVLENRWKQLSRQTGPNNFEVDWIGVQREIEN
GLSRRMRRELQVEPLILCLVQPAPSGTRAYIPKITEEQNFSNRNRNNNNFHKKSNNNHPNSSNNPHNAQKSPKGSQNPSA
ETVTEDSFEGRTRRRRSAVTS
>Mature_661_residues
MQSSTNSTVNRSTHDSSRSKSNTPALRVIPLGGLHEIGKNTCVFEYGEELMLVDAGLAFPSDGMHGVNVVMPDTTFLKEN
QRRIKGMIVTHGHEDHIGGISHHLKHFNIPIIYGPRLAMSMLRGKMEEAGVSDRTTIQTVNPRDVVKVGQHFSVEFIRNT
HSICDSFSLAVTTPVGTIIFTGDFKFDHMPVDGEQFDIERMVHYGEKGVLCMFSDSTNAEVPGFCPSEKTIYPSLEKHIA
EAKERVILTTFASSVHRVTMILELAMKHGRKVGLLGRSMINVIAKARDIGYMKCPDDLFVPIKQIRDLPDRETLLLMTGS
QGEPLAALSRISRGEHQHVRLKTTDTVIFSASPIPGNTISVVNTIDRLMKLGAKVVYGKGENIHVSGHGFQEDQKLMLAL
AKPKFFVPVHGEHRMLVCHGKSAQTMGVPKDNILIIENGDVVELTPNSIQKGDPVKAGVELLDNSRNGIVDARVLKERQQ
LAGDGVVTVLAPISTDGKMVAPPRVNLRGVVTTAEPRKMSMWTEREISWVLENRWKQLSRQTGPNNFEVDWIGVQREIEN
GLSRRMRRELQVEPLILCLVQPAPSGTRAYIPKITEEQNFSNRNRNNNNFHKKSNNNHPNSSNNPHNAQKSPKGSQNPSA
ETVTEDSFEGRTRRRRSAVTS

Specific function: Unknown

COG id: COG0595

COG function: function code R; Predicted hydrolase of the metallo-beta-lactamase superfamily

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the metallo-beta-lactamase superfamily. RNA-metabolizing metallo-beta-lactamase-like family. RNase J subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR011108
- InterPro:   IPR004613
- InterPro:   IPR001587 [H]

Pfam domain/function: PF00753 Lactamase_B; PF07521 RMMBL [H]

EC number: NA

Molecular weight: Translated: 73487; Mature: 73487

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: PS01292 UPF0036

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSSTNSTVNRSTHDSSRSKSNTPALRVIPLGGLHEIGKNTCVFEYGEELMLVDAGLAFP
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHCCCCEEEECCCEEEEEECCCCCC
SDGMHGVNVVMPDTTFLKENQRRIKGMIVTHGHEDHIGGISHHLKHFNIPIIYGPRLAMS
CCCCCCCEEEECCCHHHHHHHHEEEEEEEECCCCCCCCHHHHHHHHCCCCEEECCHHHHH
MLRGKMEEAGVSDRTTIQTVNPRDVVKVGQHFSVEFIRNTHSICDSFSLAVTTPVGTIIF
HHHHHHHHCCCCCCCEEEECCCHHHHHHCCCCEEHHHHHHHHHHCCCCEEEECCCEEEEE
TGDFKFDHMPVDGEQFDIERMVHYGEKGVLCMFSDSTNAEVPGFCPSEKTIYPSLEKHIA
ECCCEECCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH
EAKERVILTTFASSVHRVTMILELAMKHGRKVGLLGRSMINVIAKARDIGYMKCPDDLFV
HHHHCEEEEHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCEEECCHHHHH
PIKQIRDLPDRETLLLMTGSQGEPLAALSRISRGEHQHVRLKTTDTVIFSASPIPGNTIS
HHHHHCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCCCHHH
VVNTIDRLMKLGAKVVYGKGENIHVSGHGFQEDQKLMLALAKPKFFVPVHGEHRMLVCHG
HHHHHHHHHHCCCEEEEECCCEEEEECCCCCCCCCEEEEECCCCEEEEECCCCEEEEEEC
KSAQTMGVPKDNILIIENGDVVELTPNSIQKGDPVKAGVELLDNSRNGIVDARVLKERQQ
CCCCCCCCCCCCEEEEECCCEEEECCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHH
LAGDGVVTVLAPISTDGKMVAPPRVNLRGVVTTAEPRKMSMWTEREISWVLENRWKQLSR
HCCCCEEEEEEEECCCCCEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
QTGPNNFEVDWIGVQREIENGLSRRMRRELQVEPLILCLVQPAPSGTRAYIPKITEEQNF
HCCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEECCCCCCCCCC
SNRNRNNNNFHKKSNNNHPNSSNNPHNAQKSPKGSQNPSAETVTEDSFEGRTRRRRSAVT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC
S
C
>Mature Secondary Structure
MQSSTNSTVNRSTHDSSRSKSNTPALRVIPLGGLHEIGKNTCVFEYGEELMLVDAGLAFP
CCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHCCCCEEEECCCEEEEEECCCCCC
SDGMHGVNVVMPDTTFLKENQRRIKGMIVTHGHEDHIGGISHHLKHFNIPIIYGPRLAMS
CCCCCCCEEEECCCHHHHHHHHEEEEEEEECCCCCCCCHHHHHHHHCCCCEEECCHHHHH
MLRGKMEEAGVSDRTTIQTVNPRDVVKVGQHFSVEFIRNTHSICDSFSLAVTTPVGTIIF
HHHHHHHHCCCCCCCEEEECCCHHHHHHCCCCEEHHHHHHHHHHCCCCEEEECCCEEEEE
TGDFKFDHMPVDGEQFDIERMVHYGEKGVLCMFSDSTNAEVPGFCPSEKTIYPSLEKHIA
ECCCEECCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH
EAKERVILTTFASSVHRVTMILELAMKHGRKVGLLGRSMINVIAKARDIGYMKCPDDLFV
HHHHCEEEEHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHCCCEEECCHHHHH
PIKQIRDLPDRETLLLMTGSQGEPLAALSRISRGEHQHVRLKTTDTVIFSASPIPGNTIS
HHHHHCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCCEEEEEEEEEEEEECCCCCCCHHH
VVNTIDRLMKLGAKVVYGKGENIHVSGHGFQEDQKLMLALAKPKFFVPVHGEHRMLVCHG
HHHHHHHHHHCCCEEEEECCCEEEEECCCCCCCCCEEEEECCCCEEEEECCCCEEEEEEC
KSAQTMGVPKDNILIIENGDVVELTPNSIQKGDPVKAGVELLDNSRNGIVDARVLKERQQ
CCCCCCCCCCCCEEEEECCCEEEECCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHH
LAGDGVVTVLAPISTDGKMVAPPRVNLRGVVTTAEPRKMSMWTEREISWVLENRWKQLSR
HCCCCEEEEEEEECCCCCEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHH
QTGPNNFEVDWIGVQREIENGLSRRMRRELQVEPLILCLVQPAPSGTRAYIPKITEEQNF
HCCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCEEECCCCCCCCCC
SNRNRNNNNFHKKSNNNHPNSSNNPHNAQKSPKGSQNPSAETVTEDSFEGRTRRRRSAVT
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC
S
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]