| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126697178
Identifier: 126697178
GI number: 126697178
Start: 1564010
End: 1564786
Strand: Reverse
Name: 126697178
Synonym: P9301_18401
Alternate gene names: NA
Gene position: 1564786-1564010 (Counterclockwise)
Preceding gene: 126697180
Following gene: 126697177
Centisome position: 95.3
GC content: 33.33
Gene sequence:
>777_bases ATGAGTCTGATTAATCTTTTGCCACAAAAAATTAAAGAAGAGTTAAGAAGCAAATCCTTACTCAAAGTTATTTCAGGATT GAATAATTTCGATGTTCAATCTGTGAAAATAATTGTTGAGGCTGCTTCATTAGGAGGTGCAGATCTTGTCGATATTGCTT GTAAACCTGAACTAGTTGATTTAGCACTTAAGAATTCAACACTTCCCGTTTGTGTTAGTTCAGTAGTGCCTCAATCTTTT CAAGATTCTGTAAAAGCAGGAGCATCATTAATTGAAATAGGAAATTACGATACTTTTTATGAAAAAGGTATTAATTTTTC AGATAAAAAAGTTTTAAACATAACAAAAGAGACGAGGGATTTATTGCCTAATATTCCTTTATCAGTAACTGTTCCTCATA CTATGCCTATTGATAAACAAGTTGATCTTGCTATAAGGCTAGTAGAAGAAGGTGTTGACATTATTCAAACAGAAGGTGGC ACCAGTTCTACTCCTTACTCTTCAGGAATTCAGGGCTTTTTTGAAAAATCAGTACCAACTCTTGCAGCTACCTATGCAAT TCATCAAGAATTTAAGAAACAATCTCTGAATATACCAATCATGAGTGCCTCTGGATTAAGCCAAGTAACTTGTCCACTAG CAATATCCTCTGGAGCTTCAGCAGTTGGCGTTGGATCTGTAGTTAATAAATTAGATGATTTAATATCGATGATTGCGGTT GTTAGAGGTTTAAAAGAATCTTTGAAAAATTCAATAATTCGAGAAAAAATTTCTTAG
Upstream 100 bases:
>100_bases TTTTTTATCAGTCATTTTGTGTTGCTCAGATAATATTTTTTAAAAAATGCACTGTTTTACTAAAACAATGTCACAATCGG GTAATAAATTCATTAAGTAA
Downstream 100 bases:
>100_bases TATAGCATTACCTTTTTGCTATTAGGTTGATGAACAACTATAAGCTTCAAGCTCCTTACGAACCAAATGGAGATCAACCA GAAGCTATTAAAAAATTAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MSLINLLPQKIKEELRSKSLLKVISGLNNFDVQSVKIIVEAASLGGADLVDIACKPELVDLALKNSTLPVCVSSVVPQSF QDSVKAGASLIEIGNYDTFYEKGINFSDKKVLNITKETRDLLPNIPLSVTVPHTMPIDKQVDLAIRLVEEGVDIIQTEGG TSSTPYSSGIQGFFEKSVPTLAATYAIHQEFKKQSLNIPIMSASGLSQVTCPLAISSGASAVGVGSVVNKLDDLISMIAV VRGLKESLKNSIIREKIS
Sequences:
>Translated_258_residues MSLINLLPQKIKEELRSKSLLKVISGLNNFDVQSVKIIVEAASLGGADLVDIACKPELVDLALKNSTLPVCVSSVVPQSF QDSVKAGASLIEIGNYDTFYEKGINFSDKKVLNITKETRDLLPNIPLSVTVPHTMPIDKQVDLAIRLVEEGVDIIQTEGG TSSTPYSSGIQGFFEKSVPTLAATYAIHQEFKKQSLNIPIMSASGLSQVTCPLAISSGASAVGVGSVVNKLDDLISMIAV VRGLKESLKNSIIREKIS >Mature_257_residues SLINLLPQKIKEELRSKSLLKVISGLNNFDVQSVKIIVEAASLGGADLVDIACKPELVDLALKNSTLPVCVSSVVPQSFQ DSVKAGASLIEIGNYDTFYEKGINFSDKKVLNITKETRDLLPNIPLSVTVPHTMPIDKQVDLAIRLVEEGVDIIQTEGGT SSTPYSSGIQGFFEKSVPTLAATYAIHQEFKKQSLNIPIMSASGLSQVTCPLAISSGASAVGVGSVVNKLDDLISMIAVV RGLKESLKNSIIREKIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27598; Mature: 27467
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLINLLPQKIKEELRSKSLLKVISGLNNFDVQSVKIIVEAASLGGADLVDIACKPELVD CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEECCCCCCCCEEEECCCCHHHH LALKNSTLPVCVSSVVPQSFQDSVKAGASLIEIGNYDTFYEKGINFSDKKVLNITKETRD HHHCCCCHHHHHHHHCCHHHHHHHHCCCCEEEECCCHHHHHCCCCCCCHHHHHHHHHHHH LLPNIPLSVTVPHTMPIDKQVDLAIRLVEEGVDIIQTEGGTSSTPYSSGIQGFFEKSVPT HCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHCCHH LAATYAIHQEFKKQSLNIPIMSASGLSQVTCPLAISSGASAVGVGSVVNKLDDLISMIAV HHHHHHHHHHHHHHCCCCEEEECCCCCCEECCEEECCCCCHHHHHHHHHHHHHHHHHHHH VRGLKESLKNSIIREKIS HHHHHHHHHHHHHHHHCC >Mature Secondary Structure SLINLLPQKIKEELRSKSLLKVISGLNNFDVQSVKIIVEAASLGGADLVDIACKPELVD CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEECCCCCCCCEEEECCCCHHHH LALKNSTLPVCVSSVVPQSFQDSVKAGASLIEIGNYDTFYEKGINFSDKKVLNITKETRD HHHCCCCHHHHHHHHCCHHHHHHHHCCCCEEEECCCHHHHHCCCCCCCHHHHHHHHHHHH LLPNIPLSVTVPHTMPIDKQVDLAIRLVEEGVDIIQTEGGTSSTPYSSGIQGFFEKSVPT HCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHCCHH LAATYAIHQEFKKQSLNIPIMSASGLSQVTCPLAISSGASAVGVGSVVNKLDDLISMIAV HHHHHHHHHHHHHHCCCCEEEECCCCCCEECCEEECCCCCHHHHHHHHHHHHHHHHHHHH VRGLKESLKNSIIREKIS HHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA