Definition Prochlorococcus marinus str. MIT 9301, complete genome.
Accession NC_009091
Length 1,641,879

Click here to switch to the map view.

The map label for this gene is 126697178

Identifier: 126697178

GI number: 126697178

Start: 1564010

End: 1564786

Strand: Reverse

Name: 126697178

Synonym: P9301_18401

Alternate gene names: NA

Gene position: 1564786-1564010 (Counterclockwise)

Preceding gene: 126697180

Following gene: 126697177

Centisome position: 95.3

GC content: 33.33

Gene sequence:

>777_bases
ATGAGTCTGATTAATCTTTTGCCACAAAAAATTAAAGAAGAGTTAAGAAGCAAATCCTTACTCAAAGTTATTTCAGGATT
GAATAATTTCGATGTTCAATCTGTGAAAATAATTGTTGAGGCTGCTTCATTAGGAGGTGCAGATCTTGTCGATATTGCTT
GTAAACCTGAACTAGTTGATTTAGCACTTAAGAATTCAACACTTCCCGTTTGTGTTAGTTCAGTAGTGCCTCAATCTTTT
CAAGATTCTGTAAAAGCAGGAGCATCATTAATTGAAATAGGAAATTACGATACTTTTTATGAAAAAGGTATTAATTTTTC
AGATAAAAAAGTTTTAAACATAACAAAAGAGACGAGGGATTTATTGCCTAATATTCCTTTATCAGTAACTGTTCCTCATA
CTATGCCTATTGATAAACAAGTTGATCTTGCTATAAGGCTAGTAGAAGAAGGTGTTGACATTATTCAAACAGAAGGTGGC
ACCAGTTCTACTCCTTACTCTTCAGGAATTCAGGGCTTTTTTGAAAAATCAGTACCAACTCTTGCAGCTACCTATGCAAT
TCATCAAGAATTTAAGAAACAATCTCTGAATATACCAATCATGAGTGCCTCTGGATTAAGCCAAGTAACTTGTCCACTAG
CAATATCCTCTGGAGCTTCAGCAGTTGGCGTTGGATCTGTAGTTAATAAATTAGATGATTTAATATCGATGATTGCGGTT
GTTAGAGGTTTAAAAGAATCTTTGAAAAATTCAATAATTCGAGAAAAAATTTCTTAG

Upstream 100 bases:

>100_bases
TTTTTTATCAGTCATTTTGTGTTGCTCAGATAATATTTTTTAAAAAATGCACTGTTTTACTAAAACAATGTCACAATCGG
GTAATAAATTCATTAAGTAA

Downstream 100 bases:

>100_bases
TATAGCATTACCTTTTTGCTATTAGGTTGATGAACAACTATAAGCTTCAAGCTCCTTACGAACCAAATGGAGATCAACCA
GAAGCTATTAAAAAATTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MSLINLLPQKIKEELRSKSLLKVISGLNNFDVQSVKIIVEAASLGGADLVDIACKPELVDLALKNSTLPVCVSSVVPQSF
QDSVKAGASLIEIGNYDTFYEKGINFSDKKVLNITKETRDLLPNIPLSVTVPHTMPIDKQVDLAIRLVEEGVDIIQTEGG
TSSTPYSSGIQGFFEKSVPTLAATYAIHQEFKKQSLNIPIMSASGLSQVTCPLAISSGASAVGVGSVVNKLDDLISMIAV
VRGLKESLKNSIIREKIS

Sequences:

>Translated_258_residues
MSLINLLPQKIKEELRSKSLLKVISGLNNFDVQSVKIIVEAASLGGADLVDIACKPELVDLALKNSTLPVCVSSVVPQSF
QDSVKAGASLIEIGNYDTFYEKGINFSDKKVLNITKETRDLLPNIPLSVTVPHTMPIDKQVDLAIRLVEEGVDIIQTEGG
TSSTPYSSGIQGFFEKSVPTLAATYAIHQEFKKQSLNIPIMSASGLSQVTCPLAISSGASAVGVGSVVNKLDDLISMIAV
VRGLKESLKNSIIREKIS
>Mature_257_residues
SLINLLPQKIKEELRSKSLLKVISGLNNFDVQSVKIIVEAASLGGADLVDIACKPELVDLALKNSTLPVCVSSVVPQSFQ
DSVKAGASLIEIGNYDTFYEKGINFSDKKVLNITKETRDLLPNIPLSVTVPHTMPIDKQVDLAIRLVEEGVDIIQTEGGT
SSTPYSSGIQGFFEKSVPTLAATYAIHQEFKKQSLNIPIMSASGLSQVTCPLAISSGASAVGVGSVVNKLDDLISMIAVV
RGLKESLKNSIIREKIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27598; Mature: 27467

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLINLLPQKIKEELRSKSLLKVISGLNNFDVQSVKIIVEAASLGGADLVDIACKPELVD
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEECCCCCCCCEEEECCCCHHHH
LALKNSTLPVCVSSVVPQSFQDSVKAGASLIEIGNYDTFYEKGINFSDKKVLNITKETRD
HHHCCCCHHHHHHHHCCHHHHHHHHCCCCEEEECCCHHHHHCCCCCCCHHHHHHHHHHHH
LLPNIPLSVTVPHTMPIDKQVDLAIRLVEEGVDIIQTEGGTSSTPYSSGIQGFFEKSVPT
HCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHCCHH
LAATYAIHQEFKKQSLNIPIMSASGLSQVTCPLAISSGASAVGVGSVVNKLDDLISMIAV
HHHHHHHHHHHHHHCCCCEEEECCCCCCEECCEEECCCCCHHHHHHHHHHHHHHHHHHHH
VRGLKESLKNSIIREKIS
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLINLLPQKIKEELRSKSLLKVISGLNNFDVQSVKIIVEAASLGGADLVDIACKPELVD
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEECCCCCCCCEEEECCCCHHHH
LALKNSTLPVCVSSVVPQSFQDSVKAGASLIEIGNYDTFYEKGINFSDKKVLNITKETRD
HHHCCCCHHHHHHHHCCHHHHHHHHCCCCEEEECCCHHHHHCCCCCCCHHHHHHHHHHHH
LLPNIPLSVTVPHTMPIDKQVDLAIRLVEEGVDIIQTEGGTSSTPYSSGIQGFFEKSVPT
HCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHCCHH
LAATYAIHQEFKKQSLNIPIMSASGLSQVTCPLAISSGASAVGVGSVVNKLDDLISMIAV
HHHHHHHHHHHHHHCCCCEEEECCCCCCEECCEEECCCCCHHHHHHHHHHHHHHHHHHHH
VRGLKESLKNSIIREKIS
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA