| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is pyrR [H]
Identifier: 126696961
GI number: 126696961
Start: 1356985
End: 1357521
Strand: Reverse
Name: pyrR [H]
Synonym: P9301_16231
Alternate gene names: 126696961
Gene position: 1357521-1356985 (Counterclockwise)
Preceding gene: 126696964
Following gene: 126696959
Centisome position: 82.68
GC content: 32.59
Gene sequence:
>537_bases ATGTCCAAGAATTCAAAAAAGATTGTAATACTTACTGAAGTTGAACTTAGAAAAACTATTTCGCGTTTAACTTGCGAAAT TATCGAAAAAGTAAAAAAACTGGATAACCTTTTATTGATTGGTATACCGACAAGAGGAATTCCTCTGACCGAAGTCCTAG CAAAGGAATTATTCTCAAGAACAGGTTTAAGAGTTAGAAAAGGAACAATTGATCCAACTTTTTATAGAGATGACCAAAAT AGAGTTGGAACTCGACTAATACAAGCTGCTGATATTCCAACTCCTATTGAGAAAAAAGAAATTCTTTTAATAGATGATGT AATTTACACAGGTAGAACAATTAGAGCTGCAATGGATGCTTTATATTCATGGGGCAGACCTCAAAGGGTGATGTTATTAG TAATGGTAGATAGAGGTCATAGAGAATTACCCATTCAGCCAGATTTTTGTGGCAAAAAAGTACCAACTAGTAAAATAGAA AGTATTAGTTTACGTTTAAATAATGTTGATAATGAGGAAGGAGTTTTTCTTGAATAG
Upstream 100 bases:
>100_bases AATTTAGCTTCAAACGTTACTCTTTAACAATTTATATTTAACATAGTTAGCTTTTGCTAATTTATGAAAATATTAGATTA ATTTTATTTCTTGATAAATC
Downstream 100 bases:
>100_bases CTATCTTTCAATAGATATTTCCTAAATTATATTCTCCAAAAAATTCATCTTTAACATCAAAACACTTAACCAATAAATCG GCATTTTTCGTAATTTTAAA
Product: bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase
Products: NA
Alternate protein names: Pyrimidine operon regulatory protein; Uracil phosphoribosyltransferase; UPRTase [H]
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MSKNSKKIVILTEVELRKTISRLTCEIIEKVKKLDNLLLIGIPTRGIPLTEVLAKELFSRTGLRVRKGTIDPTFYRDDQN RVGTRLIQAADIPTPIEKKEILLIDDVIYTGRTIRAAMDALYSWGRPQRVMLLVMVDRGHRELPIQPDFCGKKVPTSKIE SISLRLNNVDNEEGVFLE
Sequences:
>Translated_178_residues MSKNSKKIVILTEVELRKTISRLTCEIIEKVKKLDNLLLIGIPTRGIPLTEVLAKELFSRTGLRVRKGTIDPTFYRDDQN RVGTRLIQAADIPTPIEKKEILLIDDVIYTGRTIRAAMDALYSWGRPQRVMLLVMVDRGHRELPIQPDFCGKKVPTSKIE SISLRLNNVDNEEGVFLE >Mature_177_residues SKNSKKIVILTEVELRKTISRLTCEIIEKVKKLDNLLLIGIPTRGIPLTEVLAKELFSRTGLRVRKGTIDPTFYRDDQNR VGTRLIQAADIPTPIEKKEILLIDDVIYTGRTIRAAMDALYSWGRPQRVMLLVMVDRGHRELPIQPDFCGKKVPTSKIES ISLRLNNVDNEEGVFLE
Specific function: Displays also a weak uracil phosphoribosyltransferase activity which is not physiologically significant [H]
COG id: COG2065
COG function: function code F; Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000836 - InterPro: IPR023050 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.4.2.9 [H]
Molecular weight: Translated: 20283; Mature: 20152
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKNSKKIVILTEVELRKTISRLTCEIIEKVKKLDNLLLIGIPTRGIPLTEVLAKELFSR CCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHH TGLRVRKGTIDPTFYRDDQNRVGTRLIQAADIPTPIEKKEILLIDDVIYTGRTIRAAMDA CCCEEEECCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCEEEEEECHHHCCHHHHHHHHH LYSWGRPQRVMLLVMVDRGHRELPIQPDFCGKKVPTSKIESISLRLNNVDNEEGVFLE HHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHEEEEEEECCCCCCCCCEEC >Mature Secondary Structure SKNSKKIVILTEVELRKTISRLTCEIIEKVKKLDNLLLIGIPTRGIPLTEVLAKELFSR CCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHH TGLRVRKGTIDPTFYRDDQNRVGTRLIQAADIPTPIEKKEILLIDDVIYTGRTIRAAMDA CCCEEEECCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCEEEEEECHHHCCHHHHHHHHH LYSWGRPQRVMLLVMVDRGHRELPIQPDFCGKKVPTSKIESISLRLNNVDNEEGVFLE HHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHEEEEEEECCCCCCCCCEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA