Definition Prochlorococcus marinus str. MIT 9301, complete genome.
Accession NC_009091
Length 1,641,879

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The map label for this gene is cdsA [H]

Identifier: 126696530

GI number: 126696530

Start: 1005534

End: 1006391

Strand: Direct

Name: cdsA [H]

Synonym: P9301_11921

Alternate gene names: 126696530

Gene position: 1005534-1006391 (Clockwise)

Preceding gene: 126696529

Following gene: 126696535

Centisome position: 61.24

GC content: 30.77

Gene sequence:

>858_bases
ATGAGATTTAAAAGCGGATTACTAATAGGAATTTTTGGTTTAATTGTTGTTTTGTTGGGGGGATGGTTTTTTACCTTGGC
AACTGCGTTGCTTACATATTTAGCATTATTAGAATTTTTTAGAATGGCAGAATTTAAAGGAATAAGACCAGCTACAAAAA
CCACATTATTTTCGTCGTTTATTATTATAGTTTCTACTTATCTTGAGACCATTGGTGTGCTTGAAGGAGAAATTTCAAAT
TCAATTTTGCCAATCTGTTCAGTTGGGATATGCACTTGGTTACTTTTGCAACCAAAATCTGGGACAATTTCAGATATTGC
AGCATCTATTTTTGGATTATTCTATTTAGGTTTTTTACCTAGTTACTGGATTAAGTTGAGGGGATTAGATTCAGTGATAA
TAAGTTCAAATCAGAGTATTATGTCGTTTGAGAACTTATCAAATACCACAGGTCTTCATTTAACTTTAACTTCTTGTTTT
TTAATTGTAGCTAGTGATATTGGTTCTTATTTCATTGGGAAGTCATTTGGTAAAACATCTCTATCTCCAATATCTCCGAG
CAAAACTATAGAAGGTTTAATTGGAGGAATATCCTGTTCAATTTTACTAGCAATATTTTTCGCATTTTTAATGAATTGGG
AAAATCCATTAATTGTTGGAATAATTTATGGAATTTCAATTTCTCTTATGGCATTAGTTGGAGATTTAATAGAATCTATG
ATGAAGAGAGATGCAAAAATAAAAGATTCCGGAACTTTTTTACCGGGACATGGAGGGATTCTTGACAGAATTGACAGTTA
CATCTTTACTCCATCTGTTTTGTATTACTTTTTTATAATTCTCAAATATCTAAATTAA

Upstream 100 bases:

>100_bases
AGTGGACATAGATAGGTTTAATTGGATAAATAATCAAAGTTTATGCAACAAAGATCTGGTAAATTTTAATATAAAGGTCT
TAGAAACATAGCAATTTCAT

Downstream 100 bases:

>100_bases
TTAAGAAAAATTTTATTCCAAAAAATAATCTTTGATAATTTTGCTAGATAATGATGGAAGATCTATATGTGGAAGATGAC
CACAATTTTGTAACCCTACA

Product: phosphatidate cytidylyltransferase

Products: NA

Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MRFKSGLLIGIFGLIVVLLGGWFFTLATALLTYLALLEFFRMAEFKGIRPATKTTLFSSFIIIVSTYLETIGVLEGEISN
SILPICSVGICTWLLLQPKSGTISDIAASIFGLFYLGFLPSYWIKLRGLDSVIISSNQSIMSFENLSNTTGLHLTLTSCF
LIVASDIGSYFIGKSFGKTSLSPISPSKTIEGLIGGISCSILLAIFFAFLMNWENPLIVGIIYGISISLMALVGDLIESM
MKRDAKIKDSGTFLPGHGGILDRIDSYIFTPSVLYYFFIILKYLN

Sequences:

>Translated_285_residues
MRFKSGLLIGIFGLIVVLLGGWFFTLATALLTYLALLEFFRMAEFKGIRPATKTTLFSSFIIIVSTYLETIGVLEGEISN
SILPICSVGICTWLLLQPKSGTISDIAASIFGLFYLGFLPSYWIKLRGLDSVIISSNQSIMSFENLSNTTGLHLTLTSCF
LIVASDIGSYFIGKSFGKTSLSPISPSKTIEGLIGGISCSILLAIFFAFLMNWENPLIVGIIYGISISLMALVGDLIESM
MKRDAKIKDSGTFLPGHGGILDRIDSYIFTPSVLYYFFIILKYLN
>Mature_285_residues
MRFKSGLLIGIFGLIVVLLGGWFFTLATALLTYLALLEFFRMAEFKGIRPATKTTLFSSFIIIVSTYLETIGVLEGEISN
SILPICSVGICTWLLLQPKSGTISDIAASIFGLFYLGFLPSYWIKLRGLDSVIISSNQSIMSFENLSNTTGLHLTLTSCF
LIVASDIGSYFIGKSFGKTSLSPISPSKTIEGLIGGISCSILLAIFFAFLMNWENPLIVGIIYGISISLMALVGDLIESM
MKRDAKIKDSGTFLPGHGGILDRIDSYIFTPSVLYYFFIILKYLN

Specific function: Phospholipid biosynthesis. [C]

COG id: COG0575

COG function: function code I; CDP-diglyceride synthetase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDS family [H]

Homologues:

Organism=Escherichia coli, GI87081696, Length=107, Percent_Identity=45.7943925233645, Blast_Score=98, Evalue=6e-22,
Organism=Escherichia coli, GI1787677, Length=118, Percent_Identity=44.0677966101695, Blast_Score=96, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000374 [H]

Pfam domain/function: PF01148 CTP_transf_1 [H]

EC number: =2.7.7.41 [H]

Molecular weight: Translated: 31230; Mature: 31230

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: PS01315 CDS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFKSGLLIGIFGLIVVLLGGWFFTLATALLTYLALLEFFRMAEFKGIRPATKTTLFSSF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
IIIVSTYLETIGVLEGEISNSILPICSVGICTWLLLQPKSGTISDIAASIFGLFYLGFLP
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
SYWIKLRGLDSVIISSNQSIMSFENLSNTTGLHLTLTSCFLIVASDIGSYFIGKSFGKTS
HHHHHHCCCCHHEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
LSPISPSKTIEGLIGGISCSILLAIFFAFLMNWENPLIVGIIYGISISLMALVGDLIESM
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHH
MKRDAKIKDSGTFLPGHGGILDRIDSYIFTPSVLYYFFIILKYLN
HHCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRFKSGLLIGIFGLIVVLLGGWFFTLATALLTYLALLEFFRMAEFKGIRPATKTTLFSSF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
IIIVSTYLETIGVLEGEISNSILPICSVGICTWLLLQPKSGTISDIAASIFGLFYLGFLP
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
SYWIKLRGLDSVIISSNQSIMSFENLSNTTGLHLTLTSCFLIVASDIGSYFIGKSFGKTS
HHHHHHCCCCHHEECCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
LSPISPSKTIEGLIGGISCSILLAIFFAFLMNWENPLIVGIIYGISISLMALVGDLIESM
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHH
MKRDAKIKDSGTFLPGHGGILDRIDSYIFTPSVLYYFFIILKYLN
HHCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]