| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is thiP [H]
Identifier: 126695854
GI number: 126695854
Start: 447926
End: 449311
Strand: Reverse
Name: thiP [H]
Synonym: P9301_05161
Alternate gene names: 126695854
Gene position: 449311-447926 (Counterclockwise)
Preceding gene: 126695855
Following gene: 126695849
Centisome position: 27.37
GC content: 33.98
Gene sequence:
>1386_bases TTGGGTATTGCTGGAGGAGAAGAGGTATTAGAAACTTTAAAAGTTTTGGTACTCACAAGTTTTTTTGGAGGAGGATTAGG CACTTTAAATGGATGGTTGCTTTCAAATTGCGATTTTAAGTTCAGAAAAGTTCTCCGTATTTGTCAGCTAATTCCTTTAG CTGCCCCAGCCTACCTAATAACAGCTGTTTTACAGGATTTAGGAAGTATCTTTGGGTATCAAGTAACAGGTTTATGGTGG GGGGTATTAATACTTTCAATTTCTACTTATCCATATGTATTTATTCTTGCCAACGAAAGTTTTAATAAATTTGGAGTAAA TCAAATCAATGCTAGTAGAGGATTGGGAGTTGGGCCCTGGAGAAGCTTCTTTAAAATCGCTTTTCCAATGGCGTTACCAG CGCTCATAACAGGAATTAGTTTAATGTGTATGGAAGTAATGAATGAGTTAGGTACATTTGCATTACTAAACATTCCAAGT ATTTCAACAGGTATAGCTGAAAATTGGATAATTGATGGAAATCCAAAAAGTGCTATTGGACTATCTTTGGTAGCCTTATT TATAATTTTTACATTAATTATTTTTGAAAAATTCTCTAGAAGAAAATCAAAGAGGTGGAGTGAGAATCCTGCATCAAGAG ATTCTCAAGGGTGGGAATTAAAAAAAACTAGAGCTCTTTTAGCAATAACCTTATCTTTATTTCCTCCAATTTTCTCTTTT GGAATTCCATGTTTTTGGGTTCTGCTCAATATAGATCAAATTCAAAAAGGGTTGTCTATAGAATTGCTTACCCTATCATT CAGGACCATAAGTCTAGGATTTTTTACTGCATTAATAACGATGCTATTCTCCTTAATGATTTCACTAGCCAGACGTCCAA ATAAAAGCTTTTTACTAGGACTAATAACAAATCTTGCAGGGATAGGTTACGCAATCCCAGGAACTGTATTAGCTTTATCT TTAATAAGCATTTCTTCTTCAAAATTTAATTTCATTGCTATTTGCTTATTAGTTTGGGGTTATCTTGTCAGATTTCTAAC TATTTCAAAGGGTTCAATTGATTCAAGTCTTGAGAGAATCTCCCCTAGTCTAGATGAAGCAGCACTTGGATTAGGAGAGG ATTGGCTGGGAGTTATCAAAAGAATTCATCTACCACTTCTCCAGGGACCAATTTTTGTAGGCTCACTTTTAGTTTTTGTA GACACTATAAAAGAATTACCCATAACCTTTATTTTAAGGCCATTCGATTTTGATACATTATCTGTGAGAATATATCAATA TGCTGGAGATGAAAGAATGGTAGAGGCAATATTACCAGCCATTTTTATAATGACTTTAGGCCTTATTGCATCAATTATAT TGGTACCAAGTTTAGAAAAAAACTAA
Upstream 100 bases:
>100_bases ATTTTATTTTACTTCGTTTTTTGTTGCACTCTTAGTAATCATTCCAATCTCGAATTTTCTTCTTGAAGGATTTTTAAATG TTATAAGTGGGAATTTTTCA
Downstream 100 bases:
>100_bases ATTTTTTTGGAGAGTTTTCTTATTAAAAAAGGCAAGCTTAACAACAAATCCGCAGAGGTTGATATAACTCTAAAATAAAT TAAGCTAATGAGAATTATAT
Product: putative iron ABC transporter
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: Iron(III)-transport system permease protein fbpB 2 [H]
Number of amino acids: Translated: 461; Mature: 460
Protein sequence:
>461_residues MGIAGGEEVLETLKVLVLTSFFGGGLGTLNGWLLSNCDFKFRKVLRICQLIPLAAPAYLITAVLQDLGSIFGYQVTGLWW GVLILSISTYPYVFILANESFNKFGVNQINASRGLGVGPWRSFFKIAFPMALPALITGISLMCMEVMNELGTFALLNIPS ISTGIAENWIIDGNPKSAIGLSLVALFIIFTLIIFEKFSRRKSKRWSENPASRDSQGWELKKTRALLAITLSLFPPIFSF GIPCFWVLLNIDQIQKGLSIELLTLSFRTISLGFFTALITMLFSLMISLARRPNKSFLLGLITNLAGIGYAIPGTVLALS LISISSSKFNFIAICLLVWGYLVRFLTISKGSIDSSLERISPSLDEAALGLGEDWLGVIKRIHLPLLQGPIFVGSLLVFV DTIKELPITFILRPFDFDTLSVRIYQYAGDERMVEAILPAIFIMTLGLIASIILVPSLEKN
Sequences:
>Translated_461_residues MGIAGGEEVLETLKVLVLTSFFGGGLGTLNGWLLSNCDFKFRKVLRICQLIPLAAPAYLITAVLQDLGSIFGYQVTGLWW GVLILSISTYPYVFILANESFNKFGVNQINASRGLGVGPWRSFFKIAFPMALPALITGISLMCMEVMNELGTFALLNIPS ISTGIAENWIIDGNPKSAIGLSLVALFIIFTLIIFEKFSRRKSKRWSENPASRDSQGWELKKTRALLAITLSLFPPIFSF GIPCFWVLLNIDQIQKGLSIELLTLSFRTISLGFFTALITMLFSLMISLARRPNKSFLLGLITNLAGIGYAIPGTVLALS LISISSSKFNFIAICLLVWGYLVRFLTISKGSIDSSLERISPSLDEAALGLGEDWLGVIKRIHLPLLQGPIFVGSLLVFV DTIKELPITFILRPFDFDTLSVRIYQYAGDERMVEAILPAIFIMTLGLIASIILVPSLEKN >Mature_460_residues GIAGGEEVLETLKVLVLTSFFGGGLGTLNGWLLSNCDFKFRKVLRICQLIPLAAPAYLITAVLQDLGSIFGYQVTGLWWG VLILSISTYPYVFILANESFNKFGVNQINASRGLGVGPWRSFFKIAFPMALPALITGISLMCMEVMNELGTFALLNIPSI STGIAENWIIDGNPKSAIGLSLVALFIIFTLIIFEKFSRRKSKRWSENPASRDSQGWELKKTRALLAITLSLFPPIFSFG IPCFWVLLNIDQIQKGLSIELLTLSFRTISLGFFTALITMLFSLMISLARRPNKSFLLGLITNLAGIGYAIPGTVLALSL ISISSSKFNFIAICLLVWGYLVRFLTISKGSIDSSLERISPSLDEAALGLGEDWLGVIKRIHLPLLQGPIFVGSLLVFVD TIKELPITFILRPFDFDTLSVRIYQYAGDERMVEAILPAIFIMTLGLIASIILVPSLEKN
Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1178
COG function: function code P; ABC-type Fe3+ transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transmembrane type-1 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 50755; Mature: 50624
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIAGGEEVLETLKVLVLTSFFGGGLGTLNGWLLSNCDFKFRKVLRICQLIPLAAPAYLI CCCCCHHHHHHHHHHHHHHHHHCCCCHHCCCHHHCCCCHHHHHHHHHHHHHHCCHHHHHH TAVLQDLGSIFGYQVTGLWWGVLILSISTYPYVFILANESFNKFGVNQINASRGLGVGPW HHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHH RSFFKIAFPMALPALITGISLMCMEVMNELGTFALLNIPSISTGIAENWIIDGNPKSAIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCEECCCCCHHHH LSLVALFIIFTLIIFEKFSRRKSKRWSENPASRDSQGWELKKTRALLAITLSLFPPIFSF HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH GIPCFWVLLNIDQIQKGLSIELLTLSFRTISLGFFTALITMLFSLMISLARRPNKSFLLG CHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LITNLAGIGYAIPGTVLALSLISISSSKFNFIAICLLVWGYLVRFLTISKGSIDSSLERI HHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH SPSLDEAALGLGEDWLGVIKRIHLPLLQGPIFVGSLLVFVDTIKELPITFILRPFDFDTL CCCHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCEE SVRIYQYAGDERMVEAILPAIFIMTLGLIASIILVPSLEKN EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure GIAGGEEVLETLKVLVLTSFFGGGLGTLNGWLLSNCDFKFRKVLRICQLIPLAAPAYLI CCCCHHHHHHHHHHHHHHHHHCCCCHHCCCHHHCCCCHHHHHHHHHHHHHHCCHHHHHH TAVLQDLGSIFGYQVTGLWWGVLILSISTYPYVFILANESFNKFGVNQINASRGLGVGPW HHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHH RSFFKIAFPMALPALITGISLMCMEVMNELGTFALLNIPSISTGIAENWIIDGNPKSAIG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCEECCCCCHHHH LSLVALFIIFTLIIFEKFSRRKSKRWSENPASRDSQGWELKKTRALLAITLSLFPPIFSF HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH GIPCFWVLLNIDQIQKGLSIELLTLSFRTISLGFFTALITMLFSLMISLARRPNKSFLLG CHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH LITNLAGIGYAIPGTVLALSLISISSSKFNFIAICLLVWGYLVRFLTISKGSIDSSLERI HHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH SPSLDEAALGLGEDWLGVIKRIHLPLLQGPIFVGSLLVFVDTIKELPITFILRPFDFDTL CCCHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCEE SVRIYQYAGDERMVEAILPAIFIMTLGLIASIILVPSLEKN EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800; 7927717 [H]