Click here to switch to the map view.

The map label for this gene is yciC [H]

Identifier: 126695855

GI number: 126695855

Start: 449488

End: 450576

Strand: Reverse

Name: yciC [H]

Synonym: P9301_05171

Alternate gene names: 126695855

Gene position: 450576-449488 (Counterclockwise)

Preceding gene: 126695856

Following gene: 126695854

Centisome position: 27.44

GC content: 30.21

Gene sequence:

>1089_bases
ATGTCTAAAAATTTATTGCCAGTTACTATTATTAGTGGATTTTTGGGTTCTGGCAAAACTACACTTCTGAATCATATTTT
AAAAAATCAAGTTGGTATTAAAACAGCTGTTTTAGTCAACGAATTTGGAGAGATCGGAATAGATAATGACTTAATAATAG
AAGGCTCAGAAGATATGATCGAATTAAATAATGGATGTATATGTTGCTCTATCAATGGCGAATTATTAAATACCGTATCC
AAAGTTTTAGAAAGAGCTGAAAAATTAGACTATTTGATTGTTGAAACAACTGGATTAGCAGATCCATTGCCAGTAGCTAT
GACTTTTGCGGCTGGTGATCTTAGAGAAAAAGTAAGATTAGATTCGATAATCACTGTCATTGATGGAGAAAATTTTGATT
TTGAAATTAATAATTCAAGTGTCGCCTATTCTCAGATTTTATACGGAGATATCCTTCTTCTAAATAAATGTGATTTAGTC
AATGAAGAAAAATTAAAGAAAATCGAAAAATTTATAAATAAAATAAAAAAAGAACCAAGGATATTGAGATCAACCAATAG
TGAAGTTGGATTACAAACAATAATGAGTGTAGGTCTATTTGAAACAGATAATTTTCAATCCGATAAGGATAAAGAAGATG
TAAAAGAAAACTCACACGACCAATCTTCTCATTCTCACGATCACTCTTCTCATTCTCACGATCACTCTTCTCATTCTCAC
GATCACTCTTCTCATTCTCACGATCACTCTTCTCATTCTCACGATCACTCTTCTCATTCTCACGATTTGATTAATAGTAT
AGAGGGGTTTACATCAGTTTCTTATGAAACATATGAACCATTTTCCTTAAGGAAGTTTCAATATTTTTTAGATAATCAAA
TCTCACAAAATGTATTTAGGGCAAAAGGAATATTATGGTTTATAGAAAGTGAAAGAAAACATATTTTTCACCTATCTGGA
AAAAGATTTTCTCTAGATGATGAAGAATGGACAAAAGAAAAATCTAATAAGATAGTATTAATTGGAAGAAACTTAGATCA
TCAAACTATTAAGAATCAACTTTCATCGTGTAGATTTAGCTCAGATTAA

Upstream 100 bases:

>100_bases
TGATCTAGGAGGTATTACGAATCTGGATCAAACATTAGCTTCGGAAATCAACAAAATTTTCGATCAATAAAAATATAAAC
TTGTTTTCAAACTATTCAAA

Downstream 100 bases:

>100_bases
ATTTTCGTATTAGGATTTATTAATTTTTGAAAGTACTTATTAAAGGATTTAAAAAAGCATTAACTGAATTAAAACTATTT
TATTTTACTTCGTTTTTTGT

Product: G3E family GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 361

Protein sequence:

>362_residues
MSKNLLPVTIISGFLGSGKTTLLNHILKNQVGIKTAVLVNEFGEIGIDNDLIIEGSEDMIELNNGCICCSINGELLNTVS
KVLERAEKLDYLIVETTGLADPLPVAMTFAAGDLREKVRLDSIITVIDGENFDFEINNSSVAYSQILYGDILLLNKCDLV
NEEKLKKIEKFINKIKKEPRILRSTNSEVGLQTIMSVGLFETDNFQSDKDKEDVKENSHDQSSHSHDHSSHSHDHSSHSH
DHSSHSHDHSSHSHDHSSHSHDLINSIEGFTSVSYETYEPFSLRKFQYFLDNQISQNVFRAKGILWFIESERKHIFHLSG
KRFSLDDEEWTKEKSNKIVLIGRNLDHQTIKNQLSSCRFSSD

Sequences:

>Translated_362_residues
MSKNLLPVTIISGFLGSGKTTLLNHILKNQVGIKTAVLVNEFGEIGIDNDLIIEGSEDMIELNNGCICCSINGELLNTVS
KVLERAEKLDYLIVETTGLADPLPVAMTFAAGDLREKVRLDSIITVIDGENFDFEINNSSVAYSQILYGDILLLNKCDLV
NEEKLKKIEKFINKIKKEPRILRSTNSEVGLQTIMSVGLFETDNFQSDKDKEDVKENSHDQSSHSHDHSSHSHDHSSHSH
DHSSHSHDHSSHSHDHSSHSHDLINSIEGFTSVSYETYEPFSLRKFQYFLDNQISQNVFRAKGILWFIESERKHIFHLSG
KRFSLDDEEWTKEKSNKIVLIGRNLDHQTIKNQLSSCRFSSD
>Mature_361_residues
SKNLLPVTIISGFLGSGKTTLLNHILKNQVGIKTAVLVNEFGEIGIDNDLIIEGSEDMIELNNGCICCSINGELLNTVSK
VLERAEKLDYLIVETTGLADPLPVAMTFAAGDLREKVRLDSIITVIDGENFDFEINNSSVAYSQILYGDILLLNKCDLVN
EEKLKKIEKFINKIKKEPRILRSTNSEVGLQTIMSVGLFETDNFQSDKDKEDVKENSHDQSSHSHDHSSHSHDHSSHSHD
HSSHSHDHSSHSHDHSSHSHDLINSIEGFTSVSYETYEPFSLRKFQYFLDNQISQNVFRAKGILWFIESERKHIFHLSGK
RFSLDDEEWTKEKSNKIVLIGRNLDHQTIKNQLSSCRFSSD

Specific function: May bind GTP. Might act as metal chaperone (Potential). Contributes to optimal growth under starvation for zinc [H]

COG id: COG0523

COG function: function code R; Putative GTPases (G3E family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cobW C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI33469141, Length=377, Percent_Identity=28.6472148541114, Blast_Score=138, Evalue=6e-33,
Organism=Homo sapiens, GI126722884, Length=377, Percent_Identity=28.6472148541114, Blast_Score=138, Evalue=7e-33,
Organism=Homo sapiens, GI148727351, Length=377, Percent_Identity=28.6472148541114, Blast_Score=133, Evalue=3e-31,
Organism=Homo sapiens, GI223941779, Length=197, Percent_Identity=40.6091370558376, Blast_Score=133, Evalue=3e-31,
Organism=Homo sapiens, GI146231952, Length=212, Percent_Identity=38.2075471698113, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI223941776, Length=202, Percent_Identity=37.6237623762376, Blast_Score=121, Evalue=8e-28,
Organism=Homo sapiens, GI119120938, Length=129, Percent_Identity=42.6356589147287, Blast_Score=103, Evalue=2e-22,
Organism=Escherichia coli, GI87082430, Length=365, Percent_Identity=28.2191780821918, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI1788499, Length=182, Percent_Identity=31.3186813186813, Blast_Score=90, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6324356, Length=226, Percent_Identity=30.9734513274336, Blast_Score=106, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR011629 [H]

Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]

EC number: NA

Molecular weight: Translated: 40963; Mature: 40832

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKNLLPVTIISGFLGSGKTTLLNHILKNQVGIKTAVLVNEFGEIGIDNDLIIEGSEDMI
CCCCCEEHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEECCCCEE
ELNNGCICCSINGELLNTVSKVLERAEKLDYLIVETTGLADPLPVAMTFAAGDLREKVRL
EECCCEEEEEECHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEHHHHHHHHHHH
DSIITVIDGENFDFEINNSSVAYSQILYGDILLLNKCDLVNEEKLKKIEKFINKIKKEPR
HHEEEEECCCCCEEEECCCCCHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHHHHCCH
ILRSTNSEVGLQTIMSVGLFETDNFQSDKDKEDVKENSHDQSSHSHDHSSHSHDHSSHSH
HHHCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
DHSSHSHDHSSHSHDHSSHSHDLINSIEGFTSVSYETYEPFSLRKFQYFLDNQISQNVFR
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
AKGILWFIESERKHIFHLSGKRFSLDDEEWTKEKSNKIVLIGRNLDHQTIKNQLSSCRFS
HCCEEEEEECCCCEEEEECCCCCCCCCHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCC
SD
CC
>Mature Secondary Structure 
SKNLLPVTIISGFLGSGKTTLLNHILKNQVGIKTAVLVNEFGEIGIDNDLIIEGSEDMI
CCCCEEHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEECCCCEE
ELNNGCICCSINGELLNTVSKVLERAEKLDYLIVETTGLADPLPVAMTFAAGDLREKVRL
EECCCEEEEEECHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCEEEEHHHHHHHHHHH
DSIITVIDGENFDFEINNSSVAYSQILYGDILLLNKCDLVNEEKLKKIEKFINKIKKEPR
HHEEEEECCCCCEEEECCCCCHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHHHHCCH
ILRSTNSEVGLQTIMSVGLFETDNFQSDKDKEDVKENSHDQSSHSHDHSSHSHDHSSHSH
HHHCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
DHSSHSHDHSSHSHDHSSHSHDLINSIEGFTSVSYETYEPFSLRKFQYFLDNQISQNVFR
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
AKGILWFIESERKHIFHLSGKRFSLDDEEWTKEKSNKIVLIGRNLDHQTIKNQLSSCRFS
HCCEEEEEECCCCEEEEECCCCCCCCCHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCC
SD
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377; 9811636 [H]