| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
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The map label for this gene is 126695370
Identifier: 126695370
GI number: 126695370
Start: 31623
End: 32135
Strand: Reverse
Name: 126695370
Synonym: P9301_00321
Alternate gene names: NA
Gene position: 32135-31623 (Counterclockwise)
Preceding gene: 126695372
Following gene: 126695369
Centisome position: 1.96
GC content: 38.79
Gene sequence:
>513_bases ATGCCAAACATAAATCTAATTTATTATCTAATTGCAGGTAGTATTTTTGGAGCTTTAGCCCTAAAAACGGGTATTCCTGC TGCTCCTCTTGCAGGTGCTTTGATAGGCGCAAGCATACTTAGCATCAGCGGTAAAGTTGATATAGCAGAGTGGCCAATCG GCACGAGAACAATTTTAGAAATCGGCATTGGAACAGTTATTGGTACATCATTAACCAAAGACTCATTAATGGATCTTCAA ACCTTGTGGAGGCCAGCTATTTTAATAACTTTTACTTTAGTTATTACAGGATTAGCAATTGGATTATGGACAAGCAGATT ACTTAATATAGACGTGATAACAACAATTCTTGGTGCCGCACCAGGAGGTATTAGCGGTATGAGTCTTGTAGGGTCAGAGT ATGGGGTGGGAGCTGCAGTAGCTACCCTGCACGCAGTAAGGTTGATTACTGTACTTCTAATTCTTCCTTTAGTTGTGAAA TGCTTGAATATATTTGGAGTAATTAAATCTTAA
Upstream 100 bases:
>100_bases AAAAGGGGACATTACGAGAGGAAAGAAAAAATATTATTTGACTTTAAACCTAAAAAAAAAATTTTTTTTTTAATATTATG TTCAAACATCTTACAAAATT
Downstream 100 bases:
>100_bases ATTTCTATAGACATATTGACAATAAAAGATATTTTTAAATAGAAGATAAATGACTAATGCAAAGATTTAAGGAGAAAAAA CTAATATTATTAGCGTTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MPNINLIYYLIAGSIFGALALKTGIPAAPLAGALIGASILSISGKVDIAEWPIGTRTILEIGIGTVIGTSLTKDSLMDLQ TLWRPAILITFTLVITGLAIGLWTSRLLNIDVITTILGAAPGGISGMSLVGSEYGVGAAVATLHAVRLITVLLILPLVVK CLNIFGVIKS
Sequences:
>Translated_170_residues MPNINLIYYLIAGSIFGALALKTGIPAAPLAGALIGASILSISGKVDIAEWPIGTRTILEIGIGTVIGTSLTKDSLMDLQ TLWRPAILITFTLVITGLAIGLWTSRLLNIDVITTILGAAPGGISGMSLVGSEYGVGAAVATLHAVRLITVLLILPLVVK CLNIFGVIKS >Mature_169_residues PNINLIYYLIAGSIFGALALKTGIPAAPLAGALIGASILSISGKVDIAEWPIGTRTILEIGIGTVIGTSLTKDSLMDLQT LWRPAILITFTLVITGLAIGLWTSRLLNIDVITTILGAAPGGISGMSLVGSEYGVGAAVATLHAVRLITVLLILPLVVKC LNIFGVIKS
Specific function: Unknown
COG id: COG3180
COG function: function code R; Putative ammonia monooxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17530; Mature: 17399
Theoretical pI: Translated: 9.14; Mature: 9.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNINLIYYLIAGSIFGALALKTGIPAAPLAGALIGASILSISGKVDIAEWPIGTRTILE CCCCCEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHH IGIGTVIGTSLTKDSLMDLQTLWRPAILITFTLVITGLAIGLWTSRLLNIDVITTILGAA HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PGGISGMSLVGSEYGVGAAVATLHAVRLITVLLILPLVVKCLNIFGVIKS CCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PNINLIYYLIAGSIFGALALKTGIPAAPLAGALIGASILSISGKVDIAEWPIGTRTILE CCCCEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHH IGIGTVIGTSLTKDSLMDLQTLWRPAILITFTLVITGLAIGLWTSRLLNIDVITTILGAA HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PGGISGMSLVGSEYGVGAAVATLHAVRLITVLLILPLVVKCLNIFGVIKS CCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA