| Definition | Prochlorococcus marinus str. MIT 9301, complete genome. |
|---|---|
| Accession | NC_009091 |
| Length | 1,641,879 |
Click here to switch to the map view.
The map label for this gene is 126695369
Identifier: 126695369
GI number: 126695369
Start: 31114
End: 31566
Strand: Reverse
Name: 126695369
Synonym: P9301_00311
Alternate gene names: NA
Gene position: 31566-31114 (Counterclockwise)
Preceding gene: 126695370
Following gene: 126695368
Centisome position: 1.92
GC content: 28.92
Gene sequence:
>453_bases ATGCAAAGATTTAAGGAGAAAAAACTAATATTATTAGCGTTGGGAGTTTTCACTCCTCTAATCCTTACTAATACAAAAGT TAATGCGAGCTCATTTGGGGCAGAAATTTTTTGTACTATGCGTGAAGGCGGAAATGATCATGAAAGTAGTTGGGATGCAG CTTATTCATATATAAAAAAACAAAAGGGAGGATTTTTCAAAGTTTCTCCTAAAAATGCAGCAGCACAAATTACTGAAACA GTTATAAGAGAAAAAGAACAATTTACTTATTGCGTAGAATATTTAGATAATCTTCATCCAAATAGAAAACTAATACGAGA TTTAGAAAAAGAAGAAAAAAGAAAAGAAAAAGAAGCACAAGATAGAGAAAACAAAAGAATGAAATTAGAAAAAGAATTAG AAGAAACTAATAAAGAAATTTCTGATGAAACACTTGATAGATATAGTTATTAG
Upstream 100 bases:
>100_bases TAGTTGTGAAATGCTTGAATATATTTGGAGTAATTAAATCTTAAATTTCTATAGACATATTGACAATAAAAGATATTTTT AAATAGAAGATAAATGACTA
Downstream 100 bases:
>100_bases TTAAGTTTTTAAAAAGATAATAATTTTTTTCAAAATTTACTAAATACTATTTTGTATCTAAACACACTAAAACATATTTT TACTAGAAAATTTACTCTAA
Product: type II secretion system protein-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MQRFKEKKLILLALGVFTPLILTNTKVNASSFGAEIFCTMREGGNDHESSWDAAYSYIKKQKGGFFKVSPKNAAAQITET VIREKEQFTYCVEYLDNLHPNRKLIRDLEKEEKRKEKEAQDRENKRMKLEKELEETNKEISDETLDRYSY
Sequences:
>Translated_150_residues MQRFKEKKLILLALGVFTPLILTNTKVNASSFGAEIFCTMREGGNDHESSWDAAYSYIKKQKGGFFKVSPKNAAAQITET VIREKEQFTYCVEYLDNLHPNRKLIRDLEKEEKRKEKEAQDRENKRMKLEKELEETNKEISDETLDRYSY >Mature_150_residues MQRFKEKKLILLALGVFTPLILTNTKVNASSFGAEIFCTMREGGNDHESSWDAAYSYIKKQKGGFFKVSPKNAAAQITET VIREKEQFTYCVEYLDNLHPNRKLIRDLEKEEKRKEKEAQDRENKRMKLEKELEETNKEISDETLDRYSY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17622; Mature: 17622
Theoretical pI: Translated: 8.18; Mature: 8.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRFKEKKLILLALGVFTPLILTNTKVNASSFGAEIFCTMREGGNDHESSWDAAYSYIKK CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHH QKGGFFKVSPKNAAAQITETVIREKEQFTYCVEYLDNLHPNRKLIRDLEKEEKRKEKEAQ HCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH DRENKRMKLEKELEETNKEISDETLDRYSY HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQRFKEKKLILLALGVFTPLILTNTKVNASSFGAEIFCTMREGGNDHESSWDAAYSYIKK CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHH QKGGFFKVSPKNAAAQITETVIREKEQFTYCVEYLDNLHPNRKLIRDLEKEEKRKEKEAQ HCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH DRENKRMKLEKELEETNKEISDETLDRYSY HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA