| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is dgk [H]
Identifier: 126455460
GI number: 126455460
Start: 3223700
End: 3224389
Strand: Direct
Name: dgk [H]
Synonym: BURPS1106A_3306
Alternate gene names: 126455460
Gene position: 3223700-3224389 (Clockwise)
Preceding gene: 126454085
Following gene: 126453190
Centisome position: 80.83
GC content: 67.68
Gene sequence:
>690_bases TTGCCGATGAACTCGACACCGCTTACCGTCACCGCCCCCGACTGGCGGCCGCCGTGCCGCTACCTCGCGATCGAAGGGCC GATCGGCGTCGGCAAGACGACGCTCGCGACGCTGCTCGCCGAACGCTGGTCGATGCGCGCGCTCCTCGAGCGCCCGCAGG ACAACCCGTTTCTCGAGCGTTTCTATCGCGACACCGCGCGCTACGCGCTGCCGACGCAGCTCGCGTTCGCGCTGCAGCGC GAACGTCAGGCCCGCGAGATCGCCGCGGCCCACGAAGCGAACACGCCGATCGTTGCGGATTTCATGCCGCAGAAGAACGA AATCTTCGCGCGGCTCACGCTGCCCGACGACGAATGGCAACTGTACCGCTCGCTCGCCGCGCATCTCGACGCGCCGGCGC CCGCGCCCGATCTCGTCGTCTATCTGCAGGCGAGCCCCGAAGTGCTGTTCTCGCGCATCCAGAAACGCGGCGAGCCGATG GAGCTGCAGATCGGCGACGCGTACCTGCGCTCGCTCTGCGACGCATACAACGAATTCTTCTATCACTACGACCGCACGCC CGTGCTGACGGTCGCCGCCGAGCACCTGAACCCGCTCGACTCCCCCGACGACCTCGCGCTGCTCGTCGATCGCATCGCAT CGATGCGCGGCCGCAAGGAATTCTTCGTCAAGGGCGGCAGCGCGCGCTGA
Upstream 100 bases:
>100_bases GCCGCGCCGACGGATTCCTCGCCGACGTCGCGCACCAGCGCATCGAGAAGGTCCAGACCTGCCAGTGCCTCGCGATGCGG GCCGCCGCCGAAAAGAACCG
Downstream 100 bases:
>100_bases CGAACGCGCGCGGCGTCGCCGATCGCGACGCCGCCCTTTTCCTCACCATCGAATCGGACCTCCCATGACCTACCTTCAGG AATCCAGCCGACCGGCCGTG
Product: deoxynucleoside kinase family protein
Products: NA
Alternate protein names: DGUO kinase; dGK [H]
Number of amino acids: Translated: 229; Mature: 228
Protein sequence:
>229_residues MPMNSTPLTVTAPDWRPPCRYLAIEGPIGVGKTTLATLLAERWSMRALLERPQDNPFLERFYRDTARYALPTQLAFALQR ERQAREIAAAHEANTPIVADFMPQKNEIFARLTLPDDEWQLYRSLAAHLDAPAPAPDLVVYLQASPEVLFSRIQKRGEPM ELQIGDAYLRSLCDAYNEFFYHYDRTPVLTVAAEHLNPLDSPDDLALLVDRIASMRGRKEFFVKGGSAR
Sequences:
>Translated_229_residues MPMNSTPLTVTAPDWRPPCRYLAIEGPIGVGKTTLATLLAERWSMRALLERPQDNPFLERFYRDTARYALPTQLAFALQR ERQAREIAAAHEANTPIVADFMPQKNEIFARLTLPDDEWQLYRSLAAHLDAPAPAPDLVVYLQASPEVLFSRIQKRGEPM ELQIGDAYLRSLCDAYNEFFYHYDRTPVLTVAAEHLNPLDSPDDLALLVDRIASMRGRKEFFVKGGSAR >Mature_228_residues PMNSTPLTVTAPDWRPPCRYLAIEGPIGVGKTTLATLLAERWSMRALLERPQDNPFLERFYRDTARYALPTQLAFALQRE RQAREIAAAHEANTPIVADFMPQKNEIFARLTLPDDEWQLYRSLAAHLDAPAPAPDLVVYLQASPEVLFSRIQKRGEPME LQIGDAYLRSLCDAYNEFFYHYDRTPVLTVAAEHLNPLDSPDDLALLVDRIASMRGRKEFFVKGGSAR
Specific function: Plays an essential role in generating the deoxyribonucleotide precursors dGTP for DNA metabolism. Highly specific toward deoxyguanosine (dGuo) and deoxyinosine (dIno). Only marginal activity is observed with guanosine. UTP is slightly more efficient as ph
COG id: COG1428
COG function: function code F; Deoxynucleoside kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DCK/DGK family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002624 [H]
Pfam domain/function: PF01712 dNK [H]
EC number: =2.7.1.113 [H]
Molecular weight: Translated: 26003; Mature: 25872
Theoretical pI: Translated: 5.73; Mature: 5.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPMNSTPLTVTAPDWRPPCRYLAIEGPIGVGKTTLATLLAERWSMRALLERPQDNPFLER CCCCCCCEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH FYRDTARYALPTQLAFALQRERQAREIAAAHEANTPIVADFMPQKNEIFARLTLPDDEWQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEECCCHHHH LYRSLAAHLDAPAPAPDLVVYLQASPEVLFSRIQKRGEPMELQIGDAYLRSLCDAYNEFF HHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHH YHYDRTPVLTVAAEHLNPLDSPDDLALLVDRIASMRGRKEFFVKGGSAR HHCCCCCCEEEEHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCC >Mature Secondary Structure PMNSTPLTVTAPDWRPPCRYLAIEGPIGVGKTTLATLLAERWSMRALLERPQDNPFLER CCCCCCEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHH FYRDTARYALPTQLAFALQRERQAREIAAAHEANTPIVADFMPQKNEIFARLTLPDDEWQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEECCCHHHH LYRSLAAHLDAPAPAPDLVVYLQASPEVLFSRIQKRGEPMELQIGDAYLRSLCDAYNEFF HHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHH YHYDRTPVLTVAAEHLNPLDSPDDLALLVDRIASMRGRKEFFVKGGSAR HHCCCCCCEEEEHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]