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The map label for this gene is clpS [H]

Identifier: 126455350

GI number: 126455350

Start: 944034

End: 944348

Strand: Direct

Name: clpS [H]

Synonym: BURPS1106A_0963

Alternate gene names: 126455350

Gene position: 944034-944348 (Clockwise)

Preceding gene: 126453660

Following gene: 126452761

Centisome position: 23.67

GC content: 56.51

Gene sequence:

>315_bases
ATGGCGATTATCCCGGACAAGCAGGACAGCAGCGTCCTGGAACGCAAGGAACAGAAGCTCAAGCCGCCTTCGATGTACAA
GGTGGTGCTCCTGAACGACGACTTCACGCCAATGGAATTCGTCGTGATGGTCGTGCAGGAGTATTTCAAGAAAGATCGCG
AAACGGCAACACAGATTATGCTGAAGGTGCATCGCGAAGGGCGGGGAGTTTGTGGGGTCTATACGCGGGACATCGCGTCG
ACCAAAGTCGAGCAAGTCGTTACCCATGCGCGGCAGGCCGGGCATCCGCTGCAGTGCGTGATGGAGGAAGCATGA

Upstream 100 bases:

>100_bases
AGAGGGACGCTGCCGCACGTGGGGAGCCGGGGAGGGCGCCGGCTGGTCAGTCGGTTAATGACAGGATTGCGGGCCTGTCC
GAGTTGTTTAGAATGGGTGT

Downstream 100 bases:

>100_bases
TTGCCCAGGAATTGGAAGTCAGCCTGCACATGGCGTTCATGGAAGCGCGCCAGGCGCGGCATGAGTTCATTACGGTCGAG
CATCTTTTGTTGGCCCTGCT

Product: ATP-dependent Clp protease adaptor protein ClpS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MAIIPDKQDSSVLERKEQKLKPPSMYKVVLLNDDFTPMEFVVMVVQEYFKKDRETATQIMLKVHREGRGVCGVYTRDIAS
TKVEQVVTHARQAGHPLQCVMEEA

Sequences:

>Translated_104_residues
MAIIPDKQDSSVLERKEQKLKPPSMYKVVLLNDDFTPMEFVVMVVQEYFKKDRETATQIMLKVHREGRGVCGVYTRDIAS
TKVEQVVTHARQAGHPLQCVMEEA
>Mature_103_residues
AIIPDKQDSSVLERKEQKLKPPSMYKVVLLNDDFTPMEFVVMVVQEYFKKDRETATQIMLKVHREGRGVCGVYTRDIAST
KVEQVVTHARQAGHPLQCVMEEA

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation [H]

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family [H]

Homologues:

Organism=Escherichia coli, GI1787108, Length=91, Percent_Identity=54.9450549450549, Blast_Score=115, Evalue=7e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719 [H]

Pfam domain/function: PF02617 ClpS [H]

EC number: NA

Molecular weight: Translated: 11923; Mature: 11792

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIIPDKQDSSVLERKEQKLKPPSMYKVVLLNDDFTPMEFVVMVVQEYFKKDRETATQIM
CCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LKVHREGRGVCGVYTRDIASTKVEQVVTHARQAGHPLQCVMEEA
HHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCC
>Mature Secondary Structure 
AIIPDKQDSSVLERKEQKLKPPSMYKVVLLNDDFTPMEFVVMVVQEYFKKDRETATQIM
CCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LKVHREGRGVCGVYTRDIASTKVEQVVTHARQAGHPLQCVMEEA
HHHHHCCCCEECHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA