| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126454998
Identifier: 126454998
GI number: 126454998
Start: 619517
End: 620758
Strand: Direct
Name: 126454998
Synonym: BURPS1106A_0647
Alternate gene names: NA
Gene position: 619517-620758 (Clockwise)
Preceding gene: 126453370
Following gene: 126452267
Centisome position: 15.53
GC content: 67.23
Gene sequence:
>1242_bases TTGAAGGTAGCAATCGTTCACGACTGGCTGGTGGTGTATGGCGGCGCGGAGCGTGTGCTCGCGCAGATGATCGACTGCTT TGCGCAAGCCGACATCTACAGCCTCGTCGATTTTCTCGACGACCGCTCGTGCCTGCGTGGCCGGCCGGTGCACACCTCGT TCATCCAGAAATTGCCGTTCGCGCGCAGCAAGTACCGCAGCTATTTGCCGCTCTTTCCGCTCGCGATCGAGCAGTTCGAT CTGTCCGGCTACGACCTGATCCTGTCGAGCTCGTATGCGGTCGCCAAGGGCGTGCTGAACGGCCCGGACCAGTTGCATGC GAGTTACGTGCACTCGCCCGTGCGCTACGCGTGGGACCTGCAGCATCAGTACCTGAACGAAGCGGGGCTCGCGCGCGGCG TGAAATCGGCGCTCGCGCGCACGTTGCTGCACTACATCCGCAACTGGGATGCGCGCTCGGCGAACGGGGTCGACCTGCTC GCGGCGAATTCGCGCTTCGTCGCGCGACGTATCCGCAAGACGTATCGGCGCGACGCGACGGTCATCTATCCGCCCGTCGA CGTCGATCATCTCGCGCTGCGCGACACGAAGGACGACTTCTATCTGACGGCGTCGCGCCTCGTGCCGTACAAGCGGATCG ATCTGATCGTCGAGGCGTTTTCGCACATGCCGTCGCGCCGGCTCGTCGTGATCGGCGACGGGCCGGAGGCGGCGAAGATC CGCGCGCTCGCGGGCCCGAACGTCACGCTGCTCGGCTACCAGCCGTTCGACGTGCTGCACGATCATCTGCAGCGCGCGAA GGCGTTCGTGTTCGCCGCGGAAGAGGATTTCGGCATCTCGCCCGTCGAAGCGCAGGCATGCGGCACGCCCGTGATCGCAT ACGGCAAGGGCGGCGTGTGCGAATCGGTGCGCGCGGCGGGCGCGGCGCCGACGGGCCTCTTCTATGCGAAGCAAACGTGC GACGCGCTGATCGATGCGATCGACCGGTTCGAGGCGATGCCGGCGGGCACATTCGATCCGCACGCGTGCCGCGCGAACGC GGAGCGCTTCAGCGCCGCGCGCTTTCGCTCGACGTTCTCGCGCTTCGTGCTCGAGGGCTACGCCGCGTTGCAGGCGGAAA TGGGCGAGACGATGCAGGACGCGCCGCTCGAGCCGGGTGGCGCGCCGGACGGCGCGCCTGTCGAGCGCGACGCGGCGGCG CCGCACGGCGCCTGCCGGAACGAAACGCTCGCGCGCATCTGA
Upstream 100 bases:
>100_bases TGCGATGACGGCGCGCAGCCGTGCCACCCGCGCCGCTCGCTGACGACGCAATCCGCGTTCGATTCGACGCGCCCAAGCGC ACATCAAAAGGACTTCCTGT
Downstream 100 bases:
>100_bases GCGCGGGCGTCTGTTCGATCTGACGTGATGCGACTACTTTTTTTTCTGACCAATTTCGGCGATCCGATGCTCACCGCGCC GCTTGCGTTCGCGGTATTGA
Product: glycosyl transferase, group 1 family protein
Products: NA
Alternate protein names: Group 1 Glycosyl Transferase; Glycosyl Transferase Group 1 Family Protein; Glycosyl Transferase; Mannosyltransferase; Glycosyl Transferase Group 1 Protein; First Mannosyl Transferase; Mannosyl Transferase; Glycosyltransferase Protein; Glycosyl Transferase Group 1 Family; Glycosyltransferase Group 1 Family Protein; Lipopolysaccharide Biosynthesys-Related Glycosyltransferase; First Mannosyl Transferase WbaZ; Group 1 Family Glycosyltransferase; Glycosyltransferase Family 4 Domain Protein; First Mannosyl Transferase O- Antigen Biosynthesis; Aldehyde Dehydrogenase; Polysaccharide Biosynthesis Protein; Glycosyl Transferase Family Protein; Mannose-1-Phosphate Guanylyltransferase
Number of amino acids: Translated: 413; Mature: 413
Protein sequence:
>413_residues MKVAIVHDWLVVYGGAERVLAQMIDCFAQADIYSLVDFLDDRSCLRGRPVHTSFIQKLPFARSKYRSYLPLFPLAIEQFD LSGYDLILSSSYAVAKGVLNGPDQLHASYVHSPVRYAWDLQHQYLNEAGLARGVKSALARTLLHYIRNWDARSANGVDLL AANSRFVARRIRKTYRRDATVIYPPVDVDHLALRDTKDDFYLTASRLVPYKRIDLIVEAFSHMPSRRLVVIGDGPEAAKI RALAGPNVTLLGYQPFDVLHDHLQRAKAFVFAAEEDFGISPVEAQACGTPVIAYGKGGVCESVRAAGAAPTGLFYAKQTC DALIDAIDRFEAMPAGTFDPHACRANAERFSAARFRSTFSRFVLEGYAALQAEMGETMQDAPLEPGGAPDGAPVERDAAA PHGACRNETLARI
Sequences:
>Translated_413_residues MKVAIVHDWLVVYGGAERVLAQMIDCFAQADIYSLVDFLDDRSCLRGRPVHTSFIQKLPFARSKYRSYLPLFPLAIEQFD LSGYDLILSSSYAVAKGVLNGPDQLHASYVHSPVRYAWDLQHQYLNEAGLARGVKSALARTLLHYIRNWDARSANGVDLL AANSRFVARRIRKTYRRDATVIYPPVDVDHLALRDTKDDFYLTASRLVPYKRIDLIVEAFSHMPSRRLVVIGDGPEAAKI RALAGPNVTLLGYQPFDVLHDHLQRAKAFVFAAEEDFGISPVEAQACGTPVIAYGKGGVCESVRAAGAAPTGLFYAKQTC DALIDAIDRFEAMPAGTFDPHACRANAERFSAARFRSTFSRFVLEGYAALQAEMGETMQDAPLEPGGAPDGAPVERDAAA PHGACRNETLARI >Mature_413_residues MKVAIVHDWLVVYGGAERVLAQMIDCFAQADIYSLVDFLDDRSCLRGRPVHTSFIQKLPFARSKYRSYLPLFPLAIEQFD LSGYDLILSSSYAVAKGVLNGPDQLHASYVHSPVRYAWDLQHQYLNEAGLARGVKSALARTLLHYIRNWDARSANGVDLL AANSRFVARRIRKTYRRDATVIYPPVDVDHLALRDTKDDFYLTASRLVPYKRIDLIVEAFSHMPSRRLVVIGDGPEAAKI RALAGPNVTLLGYQPFDVLHDHLQRAKAFVFAAEEDFGISPVEAQACGTPVIAYGKGGVCESVRAAGAAPTGLFYAKQTC DALIDAIDRFEAMPAGTFDPHACRANAERFSAARFRSTFSRFVLEGYAALQAEMGETMQDAPLEPGGAPDGAPVERDAAA PHGACRNETLARI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45481; Mature: 45481
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVAIVHDWLVVYGGAERVLAQMIDCFAQADIYSLVDFLDDRSCLRGRPVHTSFIQKLPF CEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHCCC ARSKYRSYLPLFPLAIEQFDLSGYDLILSSSYAVAKGVLNGPDQLHASYVHSPVRYAWDL HHHHHHHCCCHHHHHHHHHCCCCCEEEEECCHHHHHHCCCCHHHHHHHHHCCHHHHHHHH QHQYLNEAGLARGVKSALARTLLHYIRNWDARSANGVDLLAANSRFVARRIRKTYRRDAT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCE VIYPPVDVDHLALRDTKDDFYLTASRLVPYKRIDLIVEAFSHMPSRRLVVIGDGPEAAKI EEECCCCCCHHEEECCCCCEEEEHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCEE RALAGPNVTLLGYQPFDVLHDHLQRAKAFVFAAEEDFGISPVEAQACGTPVIAYGKGGVC EEECCCCEEEEECCCHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHCCCCEEEECCCCHH ESVRAAGAAPTGLFYAKQTCDALIDAIDRFEAMPAGTFDPHACRANAERFSAARFRSTFS HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHHH RFVLEGYAALQAEMGETMQDAPLEPGGAPDGAPVERDAAAPHGACRNETLARI HHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC >Mature Secondary Structure MKVAIVHDWLVVYGGAERVLAQMIDCFAQADIYSLVDFLDDRSCLRGRPVHTSFIQKLPF CEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHCCC ARSKYRSYLPLFPLAIEQFDLSGYDLILSSSYAVAKGVLNGPDQLHASYVHSPVRYAWDL HHHHHHHCCCHHHHHHHHHCCCCCEEEEECCHHHHHHCCCCHHHHHHHHHCCHHHHHHHH QHQYLNEAGLARGVKSALARTLLHYIRNWDARSANGVDLLAANSRFVARRIRKTYRRDAT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCE VIYPPVDVDHLALRDTKDDFYLTASRLVPYKRIDLIVEAFSHMPSRRLVVIGDGPEAAKI EEECCCCCCHHEEECCCCCEEEEHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCEE RALAGPNVTLLGYQPFDVLHDHLQRAKAFVFAAEEDFGISPVEAQACGTPVIAYGKGGVC EEECCCCEEEEECCCHHHHHHHHHHHHHEEEEECCCCCCCCCCHHHCCCCEEEECCCCHH ESVRAAGAAPTGLFYAKQTCDALIDAIDRFEAMPAGTFDPHACRANAERFSAARFRSTFS HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHHHHHHHH RFVLEGYAALQAEMGETMQDAPLEPGGAPDGAPVERDAAAPHGACRNETLARI HHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA