| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126452267
Identifier: 126452267
GI number: 126452267
Start: 620786
End: 621520
Strand: Direct
Name: 126452267
Synonym: BURPS1106A_0648
Alternate gene names: NA
Gene position: 620786-621520 (Clockwise)
Preceding gene: 126454998
Following gene: 126451645
Centisome position: 15.56
GC content: 72.24
Gene sequence:
>735_bases ATGCGACTACTTTTTTTTCTGACCAATTTCGGCGATCCGATGCTCACCGCGCCGCTTGCGTTCGCGGTATTGAGCTGGCT CGCGGCGAGCCGCCGCCGCCGCGCCGCGCTTGTCTGGGCATTGGGCTTCGCGTGTGCGGTCGGGGTGGTCGCGCTGACCA AATTCGTCTATGCGGGCTGGGGAATCGGCATCGCCGCGTGGCGCTTCACCGGCGTGAGCGGCCACACGATGCTCGGCGCG GCGGTGTATCCGCTCGTCGCGGCGATCTGCGTGCGCGACGCGTATCCGCGGCGCGCGCTCGCGGCGGGGCTCGCGTTCGC GCTCGCGATCGGCATGTCGCGCGTGCTGCTCGGCTTTCATTCGTGGTCCGAAATCGTTTCCGGCTGGCTGCTCGGCGCGG CCGTCGCGGCGTCGACGGCGAGATGTCTGCGCGGCATCGGCGGTGCGCGTGCGAGCCAAGCGCAGGCGAGCGGCATGCAC GCGGCTCGGAATGTTCCTATGGCGCGGCGAGCGCACGGCGGGAGCGCTGTCGGCGCGCATCCGCATGCGGCCGCCGGCGC CGCTGCCGTGCGGCGCGCGGCGCGCGCCCCGCGCTCGACGCTGATGTTCGTCGCGGCGGCGTGCGCGATCGCGGTGTCGT GCTACGGGCGCAGCGCGCCCGTGAGCGCATGGATCTCGGATGCGGCGCCGAAGGTCGCCGAGTGGGGCCGCGTCTGGCTC GACGATGCGCGCTGA
Upstream 100 bases:
>100_bases CGGCGCGCCTGTCGAGCGCGACGCGGCGGCGCCGCACGGCGCCTGCCGGAACGAAACGCTCGCGCGCATCTGAGCGCGGG CGTCTGTTCGATCTGACGTG
Downstream 100 bases:
>100_bases ACCCGCGGGTTTCGTTCAAGCGATGTAGACGCCGCTTGGACGTCGACGCATGCATGCGGCGACGCAATTCCACACGCGTC TTATCTCAATAATGCCGGGC
Product: PAP2 family membrane protein
Products: NA
Alternate protein names: PAP2 Family Protein; Phosphoesterase PA-Phosphatase Related Protein
Number of amino acids: Translated: 244; Mature: 244
Protein sequence:
>244_residues MRLLFFLTNFGDPMLTAPLAFAVLSWLAASRRRRAALVWALGFACAVGVVALTKFVYAGWGIGIAAWRFTGVSGHTMLGA AVYPLVAAICVRDAYPRRALAAGLAFALAIGMSRVLLGFHSWSEIVSGWLLGAAVAASTARCLRGIGGARASQAQASGMH AARNVPMARRAHGGSAVGAHPHAAAGAAAVRRAARAPRSTLMFVAAACAIAVSCYGRSAPVSAWISDAAPKVAEWGRVWL DDAR
Sequences:
>Translated_244_residues MRLLFFLTNFGDPMLTAPLAFAVLSWLAASRRRRAALVWALGFACAVGVVALTKFVYAGWGIGIAAWRFTGVSGHTMLGA AVYPLVAAICVRDAYPRRALAAGLAFALAIGMSRVLLGFHSWSEIVSGWLLGAAVAASTARCLRGIGGARASQAQASGMH AARNVPMARRAHGGSAVGAHPHAAAGAAAVRRAARAPRSTLMFVAAACAIAVSCYGRSAPVSAWISDAAPKVAEWGRVWL DDAR >Mature_244_residues MRLLFFLTNFGDPMLTAPLAFAVLSWLAASRRRRAALVWALGFACAVGVVALTKFVYAGWGIGIAAWRFTGVSGHTMLGA AVYPLVAAICVRDAYPRRALAAGLAFALAIGMSRVLLGFHSWSEIVSGWLLGAAVAASTARCLRGIGGARASQAQASGMH AARNVPMARRAHGGSAVGAHPHAAAGAAAVRRAARAPRSTLMFVAAACAIAVSCYGRSAPVSAWISDAAPKVAEWGRVWL DDAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25328; Mature: 25328
Theoretical pI: Translated: 12.06; Mature: 12.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLFFLTNFGDPMLTAPLAFAVLSWLAASRRRRAALVWALGFACAVGVVALTKFVYAGW CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GIGIAAWRFTGVSGHTMLGAAVYPLVAAICVRDAYPRRALAAGLAFALAIGMSRVLLGFH CHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH SWSEIVSGWLLGAAVAASTARCLRGIGGARASQAQASGMHAARNVPMARRAHGGSAVGAH HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCC PHAAAGAAAVRRAARAPRSTLMFVAAACAIAVSCYGRSAPVSAWISDAAPKVAEWGRVWL CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHCHHHC DDAR CCCC >Mature Secondary Structure MRLLFFLTNFGDPMLTAPLAFAVLSWLAASRRRRAALVWALGFACAVGVVALTKFVYAGW CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC GIGIAAWRFTGVSGHTMLGAAVYPLVAAICVRDAYPRRALAAGLAFALAIGMSRVLLGFH CHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH SWSEIVSGWLLGAAVAASTARCLRGIGGARASQAQASGMHAARNVPMARRAHGGSAVGAH HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCC PHAAAGAAAVRRAARAPRSTLMFVAAACAIAVSCYGRSAPVSAWISDAAPKVAEWGRVWL CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHCHHHC DDAR CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA