Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

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The map label for this gene is 126454879

Identifier: 126454879

GI number: 126454879

Start: 2937678

End: 2938928

Strand: Reverse

Name: 126454879

Synonym: BURPS1106A_2998

Alternate gene names: NA

Gene position: 2938928-2937678 (Counterclockwise)

Preceding gene: 126453144

Following gene: 126453868

Centisome position: 73.69

GC content: 71.3

Gene sequence:

>1251_bases
TTGGCGGGCGTCGCGCTTGCCGCGTTCGCGTGCGGTGCGCTCGCGCACGACGCGCAGCCGGCCGCGGGCGCATCGTCCGC
GCACGCGGCGCACATGGCGATGGACGCCGCGACGGCCGGCGCCGCGCAAAAGACGCCGCTCGCGACGGGGGCCGCGTTCG
ATGCGCGTCATCGGCTGTGGGTCGCGTGGGTCGAAGGGCAGCACGTCGTCGTCGCGCACTCGGACGACGCCGGGCGCACA
TTGGCCCCGCCCGTGACGGTCAATGCGCTGCCCGAGCCGATCTACACGAGCGCGGAGAACCGGCCGAAGCTCGCCGCGAG
CCCGGACGGGCGCGCGATCTATGTGACGTGGTCGATGCCGCTCGATGCGCCCTACACCGGGATGGTGCGCTTCTCACGCT
CGCTCGACGGCGGCGCGACGTGGTCGGTGCCCGTCACCGTGCATCGCGATCGGCAGGCGATCACGCATCGTTTCGATATG
CTGACGATCGATCCGCAAGGCCGCATCTTCGTCGCATGGATCGACAAGCGCGACCTCGTCGCCGCGCAGCGGGCAGGGCG
TTCGTACGATGGCGCGGCGATCTACTACGCGGTGTCGACCGACGGCGGCGCGACGTTCGAGCCGGAACGCAAGGTGAGCG
ATCACACGTGCGAATGCTGCCGGATCGCGATGACGGTCGATTCCGACGGCCGCGTGCAAGCCGCGTGGCGCAATGTGTTT
CCGGGCCAGATCCGCGATCATGCGGTGGCGGTGCTGCACGCGTCGGCGGATCGCGCGGTCGAGCCCGTGCGCGCGACGTT
CTCGAACTGGCATGTCGAGGCTTGCCCGGATCACGGGCCCGCGCTCGCGATCACGGCCGACGGCGTGCGGCATCTCGCGT
GGTTCGGCGTCATCGACGGCAAGGCCGACGTGTTCTATTCGCGGCTCGATGCGCGCGGCGCGCCGCTCGGCGCGCCATTT
GCGTTCGGCGACGATCCGGCGGCGCCGGACGAACAGGCGTCGCATGCGGCGCTCGTCGCGCGGCGCGACACGCTGTGGCT
CGCGTGGAAGGCGTTCGACGGCGATACGATGCGCATCAGGCTGCGCCGCTCCGACGACGGCGGCGCGCACTGGAGCGCGC
CGCGCACGCTCGCGTGGACGTCCGGCGCGAGCGACAACCCGCAGTTGCTGGCCGACCGAGGGCGCGTCTATCTGTCGTGG
CGCACGCGCAACGACGGCTATCGGTTGATCGACGTGGAGGGGCAGCGATGA

Upstream 100 bases:

>100_bases
TCGGCATCGACAACGTGACCGATCGCCGCTACTACGTGTTCCATCCTTATCCGGGCCGCACTTTTTATGGAGAGTTGAAA
TGGTCGCTGTGAGGCATCGA

Downstream 100 bases:

>100_bases
AGCGGGTGGCTTTCGCGCTCGCGGCGCTCGCCGTACTGGCGAATGCCGCGCCGGGCGCGGCGCAAGAAGGGCGGTTGCCG
CAGCCGCTGAGGGCGACGGA

Product: hypothetical protein

Products: NA

Alternate protein names: BNR Repeat-Containing Protein; Signal Peptide Protein; BNR/Asp-Box Repeat-Containing Protein; Glycosyl Hydrolase BNR Repeat-Containing Protein; Cytochrome C Biogenesis Protein; BNR/Asp-Box Repeat Domain Protein

Number of amino acids: Translated: 416; Mature: 415

Protein sequence:

>416_residues
MAGVALAAFACGALAHDAQPAAGASSAHAAHMAMDAATAGAAQKTPLATGAAFDARHRLWVAWVEGQHVVVAHSDDAGRT
LAPPVTVNALPEPIYTSAENRPKLAASPDGRAIYVTWSMPLDAPYTGMVRFSRSLDGGATWSVPVTVHRDRQAITHRFDM
LTIDPQGRIFVAWIDKRDLVAAQRAGRSYDGAAIYYAVSTDGGATFEPERKVSDHTCECCRIAMTVDSDGRVQAAWRNVF
PGQIRDHAVAVLHASADRAVEPVRATFSNWHVEACPDHGPALAITADGVRHLAWFGVIDGKADVFYSRLDARGAPLGAPF
AFGDDPAAPDEQASHAALVARRDTLWLAWKAFDGDTMRIRLRRSDDGGAHWSAPRTLAWTSGASDNPQLLADRGRVYLSW
RTRNDGYRLIDVEGQR

Sequences:

>Translated_416_residues
MAGVALAAFACGALAHDAQPAAGASSAHAAHMAMDAATAGAAQKTPLATGAAFDARHRLWVAWVEGQHVVVAHSDDAGRT
LAPPVTVNALPEPIYTSAENRPKLAASPDGRAIYVTWSMPLDAPYTGMVRFSRSLDGGATWSVPVTVHRDRQAITHRFDM
LTIDPQGRIFVAWIDKRDLVAAQRAGRSYDGAAIYYAVSTDGGATFEPERKVSDHTCECCRIAMTVDSDGRVQAAWRNVF
PGQIRDHAVAVLHASADRAVEPVRATFSNWHVEACPDHGPALAITADGVRHLAWFGVIDGKADVFYSRLDARGAPLGAPF
AFGDDPAAPDEQASHAALVARRDTLWLAWKAFDGDTMRIRLRRSDDGGAHWSAPRTLAWTSGASDNPQLLADRGRVYLSW
RTRNDGYRLIDVEGQR
>Mature_415_residues
AGVALAAFACGALAHDAQPAAGASSAHAAHMAMDAATAGAAQKTPLATGAAFDARHRLWVAWVEGQHVVVAHSDDAGRTL
APPVTVNALPEPIYTSAENRPKLAASPDGRAIYVTWSMPLDAPYTGMVRFSRSLDGGATWSVPVTVHRDRQAITHRFDML
TIDPQGRIFVAWIDKRDLVAAQRAGRSYDGAAIYYAVSTDGGATFEPERKVSDHTCECCRIAMTVDSDGRVQAAWRNVFP
GQIRDHAVAVLHASADRAVEPVRATFSNWHVEACPDHGPALAITADGVRHLAWFGVIDGKADVFYSRLDARGAPLGAPFA
FGDDPAAPDEQASHAALVARRDTLWLAWKAFDGDTMRIRLRRSDDGGAHWSAPRTLAWTSGASDNPQLLADRGRVYLSWR
TRNDGYRLIDVEGQR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44847; Mature: 44716

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGVALAAFACGALAHDAQPAAGASSAHAAHMAMDAATAGAAQKTPLATGAAFDARHRLW
CCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEECCCCEEE
VAWVEGQHVVVAHSDDAGRTLAPPVTVNALPEPIYTSAENRPKLAASPDGRAIYVTWSMP
EEEECCCEEEEEECCCCCCEECCCEEECCCCCCCCCCCCCCCCEEECCCCCEEEEEEECC
LDAPYTGMVRFSRSLDGGATWSVPVTVHRDRQAITHRFDMLTIDPQGRIFVAWIDKRDLV
CCCCCCCEEEEECCCCCCCEEEEEEEEECCCHHHHEEEEEEEECCCCCEEEEEECCCHHH
AAQRAGRSYDGAAIYYAVSTDGGATFEPERKVSDHTCECCRIAMTVDSDGRVQAAWRNVF
HHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEHHHCCC
PGQIRDHAVAVLHASADRAVEPVRATFSNWHVEACPDHGPALAITADGVRHLAWFGVIDG
CCCCCCCEEEEEECCCCCCHHHHHHHHCCCEEEECCCCCCEEEEECCCCEEEEEEEEECC
KADVFYSRLDARGAPLGAPFAFGDDPAAPDEQASHAALVARRDTLWLAWKAFDGDTMRIR
CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEEECCCCEEEEE
LRRSDDGGAHWSAPRTLAWTSGASDNPQLLADRGRVYLSWRTRNDGYRLIDVEGQR
EEECCCCCCCCCCCCEEEECCCCCCCCCEEECCCEEEEEEEECCCCEEEEEECCCC
>Mature Secondary Structure 
AGVALAAFACGALAHDAQPAAGASSAHAAHMAMDAATAGAAQKTPLATGAAFDARHRLW
CCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEECCCCEEE
VAWVEGQHVVVAHSDDAGRTLAPPVTVNALPEPIYTSAENRPKLAASPDGRAIYVTWSMP
EEEECCCEEEEEECCCCCCEECCCEEECCCCCCCCCCCCCCCCEEECCCCCEEEEEEECC
LDAPYTGMVRFSRSLDGGATWSVPVTVHRDRQAITHRFDMLTIDPQGRIFVAWIDKRDLV
CCCCCCCEEEEECCCCCCCEEEEEEEEECCCHHHHEEEEEEEECCCCCEEEEEECCCHHH
AAQRAGRSYDGAAIYYAVSTDGGATFEPERKVSDHTCECCRIAMTVDSDGRVQAAWRNVF
HHHHCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEHHHCCC
PGQIRDHAVAVLHASADRAVEPVRATFSNWHVEACPDHGPALAITADGVRHLAWFGVIDG
CCCCCCCEEEEEECCCCCCHHHHHHHHCCCEEEECCCCCCEEEEECCCCEEEEEEEEECC
KADVFYSRLDARGAPLGAPFAFGDDPAAPDEQASHAALVARRDTLWLAWKAFDGDTMRIR
CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEEECCCCEEEEE
LRRSDDGGAHWSAPRTLAWTSGASDNPQLLADRGRVYLSWRTRNDGYRLIDVEGQR
EEECCCCCCCCCCCCEEEECCCCCCCCCEEECCCEEEEEEEECCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA