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The map label for this gene is 126454623

Identifier: 126454623

GI number: 126454623

Start: 1846671

End: 1847615

Strand: Direct

Name: 126454623

Synonym: BURPS1106A_1890

Alternate gene names: NA

Gene position: 1846671-1847615 (Clockwise)

Preceding gene: 126452248

Following gene: 126454065

Centisome position: 46.3

GC content: 72.38

Gene sequence:

>945_bases
ATGACGCCGGCCGCGCTGTCGATCACCGTGCTGCTCGCGCTCGTCGCCGTCGCGGCGCTAGCGTGGCTGCTCATCCGCGA
CGTCGCGGTGCGCCGGCGCGTCGCGCAGCGCGCGCGCGCGAGCGCCGCGCGCGCGGCGGCCGTCTACGCGCCGGTGGACG
ACGGCGCGCGCAGCGTGCCGCGGCGCGTCGCGCAGCGCGTGGCGTCGCTCGGCGAGCGGGTGCCCGTCGTCGACGCGACG
CAGCGGATGAAGCTTGCCGCGCGGCTCGCGAGCGCGGGCTTTCGCGAGCATCGCGCGGTGTCGGTGATGGCGGGGCTCAA
GCTCGTCGTCGGCGCGTGCGCGGGGCTCGCCGCGCTCGCGCTCGGCGCGCACGTGCCGCGCGTGGGCGACTACGTGGTGC
TGCGCGTGCTGATGATGGCGGGCGCGTTCGTGATCGGCATGATGCTGCCCGAGCATGCGCTCGGCTTCGTGCTCGCGCGG
CGCCAGAAGACGATCGCCGCGTACCTGCCCGACGCGCTCGACTTGCTCGTCATCTGCACGAACGCGGGCAACAGCCTCGC
GGTCGCGATCCGGCGCGTCGCGTCCGAGCTGAAGACGATCTGCCCGCCGCTCGCCGACGAATTCTCCGTGTGCGCGGACG
AACTGCAGATCGGCGGCGACGCCGCGTTCGCGCTCAACGCGATGGCCGCGCGCATCGGCCTGCCGTCGATGCGCGCGCTC
GTGACGACGCTCGTCCAGTCGCAGCAATACGGCACGCCGATCACGCAGTCGCTGCGGATGCTCTCGCGCACCGAGCGCGC
GATGCAGATGATCGCGCTCGAGGAAAAGGCGGCGAAGCTCGCGCCGAAGATGACGCTGCCGATGATGCTGTTCGTGATGC
CGACCGTTGCGTTGATCGCGGCGGGGCCGGCGGTGATTCGACTGATAGCGGTGTTCCACAAATGA

Upstream 100 bases:

>100_bases
TCCACACGCGCGCGGGGCACAAGATGCTGATCCTCGCCGCGGTGCTGCTCACCGTCGGTCTCGCGATGATTCGCAAGATC
GCCAACCTGGACACTTCGCG

Downstream 100 bases:

>100_bases
ATGACCGACATTTCGACGACGCATGCGACGGCGCATGCACGGCGCGGCGCCCCGGCCGCGCAGCACGCGCGGGCCGCGCG
CGAAGCTTGGGAAGCATGGG

Product: type II secretion system protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadC; Type II Secretion System F Domain Protein; Type II/IV Secretion System Protein TadC Subfamily; Flp Pilus Assembly Protein; Type II Secretion System F Domain-Containing Protein; TadC Protein; Tad Secretion System Secretion Accessory Protein; Type II Secretion System F Domain; Bacterial Type II Secretion System Protein F Domain; Pilus Assembly Protein; Tight Adherence TadC-Like Transmembrane Protein; Pilus Component Protein; TadC Pilus Assembly Protein; Integral Membrane Protein; TadC Family Type II/IV Secretion System Protein; Type II Secretion System; TadC Component Of Type IV Pilus; Type II Secretion System Protein F Domain Protein; Bipartite Nuclear Localization Signal Containing Protein; Tight Adherence TadC-Related Transmembrane Protein; Secretion System Protein TadC; Tyrosine Phenol-Lyase; Bacterial Type II Secretion System Protein; Fimbriae-Related Membrane Protein; Bacterial Type II Secretion System Protein F; Pilus Assembly Protein TadC; Putative Tight Adherence TadC-Like Transmembrane Protein; Components Of Type IV Pilus TadC; Pilus Assemble Protein; Von Willebrand Factor Type A; Component Of Type IV Pilus; Component Of Pilus Protein; Tight Adherence Protein C; Components Of Type IV Pilus

Number of amino acids: Translated: 314; Mature: 313

Protein sequence:

>314_residues
MTPAALSITVLLALVAVAALAWLLIRDVAVRRRVAQRARASAARAAAVYAPVDDGARSVPRRVAQRVASLGERVPVVDAT
QRMKLAARLASAGFREHRAVSVMAGLKLVVGACAGLAALALGAHVPRVGDYVVLRVLMMAGAFVIGMMLPEHALGFVLAR
RQKTIAAYLPDALDLLVICTNAGNSLAVAIRRVASELKTICPPLADEFSVCADELQIGGDAAFALNAMAARIGLPSMRAL
VTTLVQSQQYGTPITQSLRMLSRTERAMQMIALEEKAAKLAPKMTLPMMLFVMPTVALIAAGPAVIRLIAVFHK

Sequences:

>Translated_314_residues
MTPAALSITVLLALVAVAALAWLLIRDVAVRRRVAQRARASAARAAAVYAPVDDGARSVPRRVAQRVASLGERVPVVDAT
QRMKLAARLASAGFREHRAVSVMAGLKLVVGACAGLAALALGAHVPRVGDYVVLRVLMMAGAFVIGMMLPEHALGFVLAR
RQKTIAAYLPDALDLLVICTNAGNSLAVAIRRVASELKTICPPLADEFSVCADELQIGGDAAFALNAMAARIGLPSMRAL
VTTLVQSQQYGTPITQSLRMLSRTERAMQMIALEEKAAKLAPKMTLPMMLFVMPTVALIAAGPAVIRLIAVFHK
>Mature_313_residues
TPAALSITVLLALVAVAALAWLLIRDVAVRRRVAQRARASAARAAAVYAPVDDGARSVPRRVAQRVASLGERVPVVDATQ
RMKLAARLASAGFREHRAVSVMAGLKLVVGACAGLAALALGAHVPRVGDYVVLRVLMMAGAFVIGMMLPEHALGFVLARR
QKTIAAYLPDALDLLVICTNAGNSLAVAIRRVASELKTICPPLADEFSVCADELQIGGDAAFALNAMAARIGLPSMRALV
TTLVQSQQYGTPITQSLRMLSRTERAMQMIALEEKAAKLAPKMTLPMMLFVMPTVALIAAGPAVIRLIAVFHK

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33214; Mature: 33083

Theoretical pI: Translated: 11.37; Mature: 11.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPAALSITVLLALVAVAALAWLLIRDVAVRRRVAQRARASAARAAAVYAPVDDGARSVP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHH
RRVAQRVASLGERVPVVDATQRMKLAARLASAGFREHRAVSVMAGLKLVVGACAGLAALA
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGAHVPRVGDYVVLRVLMMAGAFVIGMMLPEHALGFVLARRQKTIAAYLPDALDLLVICT
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHEEC
NAGNSLAVAIRRVASELKTICPPLADEFSVCADELQIGGDAAFALNAMAARIGLPSMRAL
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHH
VTTLVQSQQYGTPITQSLRMLSRTERAMQMIALEEKAAKLAPKMTLPMMLFVMPTVALIA
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
AGPAVIRLIAVFHK
CCHHHHHHHHHHCC
>Mature Secondary Structure 
TPAALSITVLLALVAVAALAWLLIRDVAVRRRVAQRARASAARAAAVYAPVDDGARSVP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHH
RRVAQRVASLGERVPVVDATQRMKLAARLASAGFREHRAVSVMAGLKLVVGACAGLAALA
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGAHVPRVGDYVVLRVLMMAGAFVIGMMLPEHALGFVLARRQKTIAAYLPDALDLLVICT
HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHEEC
NAGNSLAVAIRRVASELKTICPPLADEFSVCADELQIGGDAAFALNAMAARIGLPSMRAL
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHH
VTTLVQSQQYGTPITQSLRMLSRTERAMQMIALEEKAAKLAPKMTLPMMLFVMPTVALIA
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
AGPAVIRLIAVFHK
CCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA