Click here to switch to the map view.

The map label for this gene is 126454065

Identifier: 126454065

GI number: 126454065

Start: 1847759

End: 1848760

Strand: Direct

Name: 126454065

Synonym: BURPS1106A_1891

Alternate gene names: NA

Gene position: 1847759-1848760 (Clockwise)

Preceding gene: 126454623

Following gene: 126452631

Centisome position: 46.33

GC content: 75.15

Gene sequence:

>1002_bases
ATGCCGGTCGCGCTGCTGCTCGCCGCGCTGCTCGCCGGCTGCGCGAGCCACGGCGTGTTTCAGCCGCGGCCGGTGCTGTC
GCAGCGCGGCACGGTCGGCGACGGCGATCTGAGCGTCGCCGAGAGCGCGCTCGCGGCCGGCGACGCGGAGCTCGCCGCGA
CGCTCTTCGAGCGCGCGCTGAAGGCCGATCCGCGCTCGCTTCCCGCTCAGGTGGGGCTCGGCGACGCGATGTACCAGACA
GGCGAGCTCGCGCGCGCGGGCGTGCTCTACGCGCAGGCGGCCGCGGCCGCGCCGGACGATCCGCGCGCGCAACTGGGCCT
TGCGCGCGTCGCGCTGCGCGAGCGGCATCTCGACGACGCGCTCGCGCGCTACGCGAAGCTGAACGCCGCGCGTCCGGACA
ACATCGCGGCGGCCGCCGGCCTCGGCACGGTGCTGGATCTGCTCGGCCGGCACGACGACGCGCAACGCGTGTATCGCGCC
GCGCTCGCGCGGCATCCGGACGCGCATGCGCTGAAGACCGACCTCGGCCTGTCGCTCGTGCTCGCGGATCGTGCGCGCGA
GGGCGCGAACGTGCTGCTCGACATCGCGGGGCTGCCGAACGCGCCCGCGCAGGCGCGCGAGGACCTCGCGCTCGCATACG
GGATGCTCGGCAACGACGATGCGGCAAAGCGCATCCTCGTTCACGATCTGCCGGCCGCGTCGGCGGAGGACAACCTGCGC
TTCTACCGGAACGTGCGCGCGCGGCGCGCGGCGGGAGCGGGGGGCGGCGGCGCACCGGGGCCGGCGGGCGCGGCAGGTGC
GACAAATGCGGCAAATGCGGCAAATGCGGCAAATGCGGCAAATGCGGCAAATGCGGCAAATGCGGCGGCCGGGCCGACCA
TGACGACTGCGGCGAACGCGCCTCGCGCGGAGCACGCGGCGGCCGCCCCGCAGGCGCCTTACGCGGGGCGCGCGATCGCC
GACGCCGGCCTCGCGCCCGTGCGCGTTGAGGTCGTCAAATGA

Upstream 100 bases:

>100_bases
GCGGCGCCCCGGCCGCGCAGCACGCGCGGGCCGCGCGCGAAGCTTGGGAAGCATGGGAGGCGGGATAGGCGCGCAACGCG
CGGGGCGCGTTCGTCGCGCG

Downstream 100 bases:

>100_bases
AGCGCCTCGCGCGTCTCGTGCACGACGAGCGCGGCGTGGTGTCGCTCGAGTTCGTGCTCGCCTTTCCGTTCATGATGCTC
GTGCTGTTCGGCATCGTCGA

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadD; Tetratricopeptide Repeat Protein

Number of amino acids: Translated: 333; Mature: 332

Protein sequence:

>333_residues
MPVALLLAALLAGCASHGVFQPRPVLSQRGTVGDGDLSVAESALAAGDAELAATLFERALKADPRSLPAQVGLGDAMYQT
GELARAGVLYAQAAAAAPDDPRAQLGLARVALRERHLDDALARYAKLNAARPDNIAAAAGLGTVLDLLGRHDDAQRVYRA
ALARHPDAHALKTDLGLSLVLADRAREGANVLLDIAGLPNAPAQAREDLALAYGMLGNDDAAKRILVHDLPAASAEDNLR
FYRNVRARRAAGAGGGGAPGPAGAAGATNAANAANAANAANAANAANAAAGPTMTTAANAPRAEHAAAAPQAPYAGRAIA
DAGLAPVRVEVVK

Sequences:

>Translated_333_residues
MPVALLLAALLAGCASHGVFQPRPVLSQRGTVGDGDLSVAESALAAGDAELAATLFERALKADPRSLPAQVGLGDAMYQT
GELARAGVLYAQAAAAAPDDPRAQLGLARVALRERHLDDALARYAKLNAARPDNIAAAAGLGTVLDLLGRHDDAQRVYRA
ALARHPDAHALKTDLGLSLVLADRAREGANVLLDIAGLPNAPAQAREDLALAYGMLGNDDAAKRILVHDLPAASAEDNLR
FYRNVRARRAAGAGGGGAPGPAGAAGATNAANAANAANAANAANAANAAAGPTMTTAANAPRAEHAAAAPQAPYAGRAIA
DAGLAPVRVEVVK
>Mature_332_residues
PVALLLAALLAGCASHGVFQPRPVLSQRGTVGDGDLSVAESALAAGDAELAATLFERALKADPRSLPAQVGLGDAMYQTG
ELARAGVLYAQAAAAAPDDPRAQLGLARVALRERHLDDALARYAKLNAARPDNIAAAAGLGTVLDLLGRHDDAQRVYRAA
LARHPDAHALKTDLGLSLVLADRAREGANVLLDIAGLPNAPAQAREDLALAYGMLGNDDAAKRILVHDLPAASAEDNLRF
YRNVRARRAAGAGGGGAPGPAGAAGATNAANAANAANAANAANAANAAAGPTMTTAANAPRAEHAAAAPQAPYAGRAIAD
AGLAPVRVEVVK

Specific function: Unknown

COG id: COG5010

COG function: function code U; Flp pilus assembly protein TadD, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33485; Mature: 33354

Theoretical pI: Translated: 7.24; Mature: 7.24

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVALLLAALLAGCASHGVFQPRPVLSQRGTVGDGDLSVAESALAAGDAELAATLFERAL
CCHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHH
KADPRSLPAQVGLGDAMYQTGELARAGVLYAQAAAAAPDDPRAQLGLARVALRERHLDDA
HCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LARYAKLNAARPDNIAAAAGLGTVLDLLGRHDDAQRVYRAALARHPDAHALKTDLGLSLV
HHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHCCEEEE
LADRAREGANVLLDIAGLPNAPAQAREDLALAYGMLGNDDAAKRILVHDLPAASAEDNLR
EHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHH
FYRNVRARRAAGAGGGGAPGPAGAAGATNAANAANAANAANAANAANAAAGPTMTTAANA
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PRAEHAAAAPQAPYAGRAIADAGLAPVRVEVVK
CCHHHHHCCCCCCCCCCHHHHCCCCCEEEEEEC
>Mature Secondary Structure 
PVALLLAALLAGCASHGVFQPRPVLSQRGTVGDGDLSVAESALAAGDAELAATLFERAL
CHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHH
KADPRSLPAQVGLGDAMYQTGELARAGVLYAQAAAAAPDDPRAQLGLARVALRERHLDDA
HCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
LARYAKLNAARPDNIAAAAGLGTVLDLLGRHDDAQRVYRAALARHPDAHALKTDLGLSLV
HHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHCCEEEE
LADRAREGANVLLDIAGLPNAPAQAREDLALAYGMLGNDDAAKRILVHDLPAASAEDNLR
EHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHH
FYRNVRARRAAGAGGGGAPGPAGAAGATNAANAANAANAANAANAANAAAGPTMTTAANA
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PRAEHAAAAPQAPYAGRAIADAGLAPVRVEVVK
CCHHHHHCCCCCCCCCCHHHHCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA