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The map label for this gene is 126452248

Identifier: 126452248

GI number: 126452248

Start: 1845679

End: 1846674

Strand: Direct

Name: 126452248

Synonym: BURPS1106A_1889

Alternate gene names: NA

Gene position: 1845679-1846674 (Clockwise)

Preceding gene: 126452852

Following gene: 126454623

Centisome position: 46.28

GC content: 73.29

Gene sequence:

>996_bases
GTGAGCGCGGCGGACGTCGTTGCCGTCGGCGCGTTTTTCGCGATCGTCGTCGCGGGCTTCATCGTGCGCGCGCTGCGCGA
TCTCGCGCGGCGGCGGCCCGCCGCGCGCGTGCGCTCGCGCGTCGAGGCGCTGCGCGAGCCGCGCGCCGCGGCGCGGCCGG
CGGCGCCCGCGCGCGCGTCGCGCGTCGGGCTGCAATTGTTCACCCGCACGCACGGCGAAGGCGAGGGCGGCGCGCTGCGC
GCCTGGCTGCGCGCGCGCGGCGAGCACGTGCGCACGGCGGCGGGCGGCGGCGGCGTGCGCGCGATCGCGTTCGCGTCCGC
GCTCGCGGCGCTTGCCGGTTTCGTCGGCGCGTCGTTCGCGGGCTTCGCGCCCTGGCTGCGGCCCGCGCTCGCGGCGGCGC
TCGCGGCCGGCGCGGCGCGCGCCGTCTACCGGATTCTGATCGGGCGCTTCAAGCAGCGCTTCCTCTCGGTGTTCCCGGAC
GCGCTCGATCTGATCATTCGCGCGGTGCGCGCGGGCATTCCGGTCGCGCAGGCGATCGGCACCGCGGGCCGCGAAAGCGA
GGAGCCCGTGCGCGCGACGTTTCGCGCGATGGGCGACGCGCTGCGCGTCGGCGCGGATCTGAAGGACGTGCTCGAGCAGC
AGGCCGAGCGCCTGCAGCTCGCCGATTTCTCGTTCTTCGGCGTGTGCCTCGTCTTGCAGCGCGAGACGGGCGGCAATCTG
ACGGAAACGCTCGAGAACCTCTCGGGCATCATCCGCACGCGCCGCGACATCCGGATGAAGACGCGCGCGCTGACGGCCGA
AGGGCGCATCGCGAGCAAGATCATCGCGGCCGTGCCGTTCGCGATCGCCGGGTTCCTGTTCGTCGTGAACCGTCCATACG
TCAATCTGCTGTTCCACACGCGCGCGGGGCACAAGATGCTGATCCTCGCCGCGGTGCTGCTCACCGTCGGTCTCGCGATG
ATTCGCAAGATCGCCAACCTGGACACTTCGCGATGA

Upstream 100 bases:

>100_bases
AGGTGCACGGAATGTTCGAATCGTCGTCGCTGCGCCCGGCGTTCGCGCAGCGCGCCGCGTATTACGGCCTCGAGGGCGCG
CTGCTCGGCGCGTTGCAGCC

Downstream 100 bases:

>100_bases
CGCCGGCCGCGCTGTCGATCACCGTGCTGCTCGCGCTCGTCGCCGTCGCGGCGCTAGCGTGGCTGCTCATCCGCGACGTC
GCGGTGCGCCGGCGCGTCGC

Product: type II secretion system protein

Products: NA

Alternate protein names: Flp Pilus Assembly Protein TadB; Type II Secretion System F Domain Protein; Pilus Assembly Protein; Type II Secretion System F Domain-Containing Protein; Flp Pilus Assembly Protein; TadB Protein; Type II Secretion System Protein F; Bacterial Type II Secretion System Protein F Domain; Pilus Assembly Protein TadB; Type II/IV Secretion System Protein TadC Subfamily; Type II Secretion System F Domain; Type II Secretion System Protein F Domain; Tad Secretion System Pilus Assembly Protein; Bacterial Type II Secretion System Protein F; Secretion System Protein; Type II Secretion System; Flp Pilus Assembly Protein Tadb; Tight Adherence TadB Related Transmembrane Protein; Secretion System Protein TadB; Tight Adherence TadB-Related Transmembrane Protein; Bacterial Type II Secretion System Protein F Domain Protein; Flp Pilus Assembly Protein TadC; Integral Membrane Protein; TadB-Like Pilus Assembly Protein; Type II/IV Secretion System Membrane Protein; Tad Secretion System Secretion Accessory Protein; Component Of Type IV Pilus; Type II Secretion System Integral Membrane Subunit; Tight Adherence TadB-Like Transmembrane Protein; Components Of Type IV Pilus; TadC Family Type II/IV Secretion System Protein

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MSAADVVAVGAFFAIVVAGFIVRALRDLARRRPAARVRSRVEALREPRAAARPAAPARASRVGLQLFTRTHGEGEGGALR
AWLRARGEHVRTAAGGGGVRAIAFASALAALAGFVGASFAGFAPWLRPALAAALAAGAARAVYRILIGRFKQRFLSVFPD
ALDLIIRAVRAGIPVAQAIGTAGRESEEPVRATFRAMGDALRVGADLKDVLEQQAERLQLADFSFFGVCLVLQRETGGNL
TETLENLSGIIRTRRDIRMKTRALTAEGRIASKIIAAVPFAIAGFLFVVNRPYVNLLFHTRAGHKMLILAAVLLTVGLAM
IRKIANLDTSR

Sequences:

>Translated_331_residues
MSAADVVAVGAFFAIVVAGFIVRALRDLARRRPAARVRSRVEALREPRAAARPAAPARASRVGLQLFTRTHGEGEGGALR
AWLRARGEHVRTAAGGGGVRAIAFASALAALAGFVGASFAGFAPWLRPALAAALAAGAARAVYRILIGRFKQRFLSVFPD
ALDLIIRAVRAGIPVAQAIGTAGRESEEPVRATFRAMGDALRVGADLKDVLEQQAERLQLADFSFFGVCLVLQRETGGNL
TETLENLSGIIRTRRDIRMKTRALTAEGRIASKIIAAVPFAIAGFLFVVNRPYVNLLFHTRAGHKMLILAAVLLTVGLAM
IRKIANLDTSR
>Mature_330_residues
SAADVVAVGAFFAIVVAGFIVRALRDLARRRPAARVRSRVEALREPRAAARPAAPARASRVGLQLFTRTHGEGEGGALRA
WLRARGEHVRTAAGGGGVRAIAFASALAALAGFVGASFAGFAPWLRPALAAALAAGAARAVYRILIGRFKQRFLSVFPDA
LDLIIRAVRAGIPVAQAIGTAGRESEEPVRATFRAMGDALRVGADLKDVLEQQAERLQLADFSFFGVCLVLQRETGGNLT
ETLENLSGIIRTRRDIRMKTRALTAEGRIASKIIAAVPFAIAGFLFVVNRPYVNLLFHTRAGHKMLILAAVLLTVGLAMI
RKIANLDTSR

Specific function: Unknown

COG id: COG4965

COG function: function code U; Flp pilus assembly protein TadB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35321; Mature: 35190

Theoretical pI: Translated: 12.21; Mature: 12.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAADVVAVGAFFAIVVAGFIVRALRDLARRRPAARVRSRVEALREPRAAARPAAPARAS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHCCCCCCHHHH
RVGLQLFTRTHGEGEGGALRAWLRARGEHVRTAAGGGGVRAIAFASALAALAGFVGASFA
HHHHHHHHHCCCCCCCHHHHHHHHHCCCHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
GFAPWLRPALAAALAAGAARAVYRILIGRFKQRFLSVFPDALDLIIRAVRAGIPVAQAIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHC
TAGRESEEPVRATFRAMGDALRVGADLKDVLEQQAERLQLADFSFFGVCLVLQRETGGNL
CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHEECCCCCCH
TETLENLSGIIRTRRDIRMKTRALTAEGRIASKIIAAVPFAIAGFLFVVNRPYVNLLFHT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEC
RAGHKMLILAAVLLTVGLAMIRKIANLDTSR
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SAADVVAVGAFFAIVVAGFIVRALRDLARRRPAARVRSRVEALREPRAAARPAAPARAS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHCCCCCCHHHH
RVGLQLFTRTHGEGEGGALRAWLRARGEHVRTAAGGGGVRAIAFASALAALAGFVGASFA
HHHHHHHHHCCCCCCCHHHHHHHHHCCCHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
GFAPWLRPALAAALAAGAARAVYRILIGRFKQRFLSVFPDALDLIIRAVRAGIPVAQAIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCHHHHHHC
TAGRESEEPVRATFRAMGDALRVGADLKDVLEQQAERLQLADFSFFGVCLVLQRETGGNL
CCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHHHEECCCCCCH
TETLENLSGIIRTRRDIRMKTRALTAEGRIASKIIAAVPFAIAGFLFVVNRPYVNLLFHT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEC
RAGHKMLILAAVLLTVGLAMIRKIANLDTSR
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA