Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

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The map label for this gene is 126454398

Identifier: 126454398

GI number: 126454398

Start: 3605219

End: 3606025

Strand: Direct

Name: 126454398

Synonym: BURPS1106A_3689

Alternate gene names: NA

Gene position: 3605219-3606025 (Clockwise)

Preceding gene: 126452753

Following gene: 126451514

Centisome position: 90.39

GC content: 58.98

Gene sequence:

>807_bases
ATGGACTCGAACGATCTCGTCCCCAGTATCAGCATCGCGAATCTCGGCAATCAGCGTGTCGCAGTCGTGCAGCGCGTACG
TGCCGCGCTGGATCTGCTCGGCGAAGCCCAACAGCTTGCGAAGTCAGCCAATCTAGGGTTCCCGCGGCTTGTGCTCGACG
AAAGCTATGGCTGTCGCGGCAGACCAATCATTACCGGAGAGTACGCAAAACGCGACGAGGCCGAAGCCGCGATGGTGCGG
ATCATCGACATTCGCGGTTGGGACTACCTGCTATCGCAGTCGGGCTTGCGAACATTCATGGACTCGAAAGCCCGCGAGCA
ATGGAGTAACCAGATTGCGGAAGGCGACGTCCCTGAACTCACCCCGGCCAACATCGAGGCCACGTTCACGCAGCTTTACG
GTGCGCGCGGCGACATGTTCGAACGCGGCGTACTCGAATGCTTCAGGCAGCTATCGTGGAACTACAAGAGCAACGAGCCT
TTCCGGTTCAGCAGAAGGATCATCCTGAAGTACCTGTTCAGCGGTGGCTTTCTCAACTATCGAGCAACCGACAAGCTGGA
CGATCTGATTCGCGTCTTCTTCGTGTTGGATGGCAAGCCCGAGCCCGATCATCGACACGGCGCGCATGTGCTCGTCGCGG
GCGACCGCCAGAGCCGACGTACGGAAGCCGAAAATGACTACTTCCACCTACGCTGGTTTAAAAACGGCAACGCTCACCTG
ACGTTCAAGCGGCCGGACTTGGTCGAACAGATGAACCGCATCCTCGCCAAACACTACCCGAACGCGCTCGCCGCCGAAGC
CCGGTAG

Upstream 100 bases:

>100_bases
CCGCTCGCAACGCCCGTTTACACCGTATCCAATTTCAACAGCCTGCTAGTGCCCGGCCTTAGCTGCCTCGTTTTCCATCC
CTTTCTCATCGTCACGAAAC

Downstream 100 bases:

>100_bases
TCCACGACTTCCTGCGCAGTCCTCGGACGCGCATCGCGTCTCAGCCATTTCCCCTTCTCTTTCACCCTGCAAGCATCCGG
GACGACCGGAGGCACGTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MDSNDLVPSISIANLGNQRVAVVQRVRAALDLLGEAQQLAKSANLGFPRLVLDESYGCRGRPIITGEYAKRDEAEAAMVR
IIDIRGWDYLLSQSGLRTFMDSKAREQWSNQIAEGDVPELTPANIEATFTQLYGARGDMFERGVLECFRQLSWNYKSNEP
FRFSRRIILKYLFSGGFLNYRATDKLDDLIRVFFVLDGKPEPDHRHGAHVLVAGDRQSRRTEAENDYFHLRWFKNGNAHL
TFKRPDLVEQMNRILAKHYPNALAAEAR

Sequences:

>Translated_268_residues
MDSNDLVPSISIANLGNQRVAVVQRVRAALDLLGEAQQLAKSANLGFPRLVLDESYGCRGRPIITGEYAKRDEAEAAMVR
IIDIRGWDYLLSQSGLRTFMDSKAREQWSNQIAEGDVPELTPANIEATFTQLYGARGDMFERGVLECFRQLSWNYKSNEP
FRFSRRIILKYLFSGGFLNYRATDKLDDLIRVFFVLDGKPEPDHRHGAHVLVAGDRQSRRTEAENDYFHLRWFKNGNAHL
TFKRPDLVEQMNRILAKHYPNALAAEAR
>Mature_268_residues
MDSNDLVPSISIANLGNQRVAVVQRVRAALDLLGEAQQLAKSANLGFPRLVLDESYGCRGRPIITGEYAKRDEAEAAMVR
IIDIRGWDYLLSQSGLRTFMDSKAREQWSNQIAEGDVPELTPANIEATFTQLYGARGDMFERGVLECFRQLSWNYKSNEP
FRFSRRIILKYLFSGGFLNYRATDKLDDLIRVFFVLDGKPEPDHRHGAHVLVAGDRQSRRTEAENDYFHLRWFKNGNAHL
TFKRPDLVEQMNRILAKHYPNALAAEAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30651; Mature: 30651

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSNDLVPSISIANLGNQRVAVVQRVRAALDLLGEAQQLAKSANLGFPRLVLDESYGCRG
CCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC
RPIITGEYAKRDEAEAAMVRIIDIRGWDYLLSQSGLRTFMDSKAREQWSNQIAEGDVPEL
CCEEECCCCCCCHHHEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
TPANIEATFTQLYGARGDMFERGVLECFRQLSWNYKSNEPFRFSRRIILKYLFSGGFLNY
CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEC
RATDKLDDLIRVFFVLDGKPEPDHRHGAHVLVAGDRQSRRTEAENDYFHLRWFKNGNAHL
CCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHCCCCCCCEEEEEEEECCCEEE
TFKRPDLVEQMNRILAKHYPNALAAEAR
EECCCHHHHHHHHHHHHHCCCCHHCCCC
>Mature Secondary Structure
MDSNDLVPSISIANLGNQRVAVVQRVRAALDLLGEAQQLAKSANLGFPRLVLDESYGCRG
CCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC
RPIITGEYAKRDEAEAAMVRIIDIRGWDYLLSQSGLRTFMDSKAREQWSNQIAEGDVPEL
CCEEECCCCCCCHHHEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
TPANIEATFTQLYGARGDMFERGVLECFRQLSWNYKSNEPFRFSRRIILKYLFSGGFLNY
CCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCEEC
RATDKLDDLIRVFFVLDGKPEPDHRHGAHVLVAGDRQSRRTEAENDYFHLRWFKNGNAHL
CCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHCCCCCCCEEEEEEEECCCEEE
TFKRPDLVEQMNRILAKHYPNALAAEAR
EECCCHHHHHHHHHHHHHCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA