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The map label for this gene is 126453352

Identifier: 126453352

GI number: 126453352

Start: 2017921

End: 2018562

Strand: Reverse

Name: 126453352

Synonym: BURPS1106A_2034

Alternate gene names: NA

Gene position: 2018562-2017921 (Counterclockwise)

Preceding gene: 126452202

Following gene: 126454659

Centisome position: 50.61

GC content: 70.09

Gene sequence:

>642_bases
ATGAAAACGAACGATTTCATCGACATGCTGGCGGCGGGCGTCACACCCGTCGAGCGCGGCGTCCCGGCCAGGCGCCTGGG
CAGTGCGCTTGCCGTCGCTGCGGTGGGCGCCGTGCTGCTGATGACGATTGCGTTCGGCGTGCGCCCCGATCTGTCGGCCG
TGATGCGCACGCCGATCTTCTGGGCGAAGCTCGCGTTTCCGATTTGCGTGGCGGCAGGCGCGATCATGGCGACCGTACGG
CTCGCCCGCCCCGGCGCGACCGTCGGTGCGGGCCGGCTGGTGGTCGGCGTCGGCATCGCGGCGGTCTGGATCGCGGGCCT
TTATGCGGTCGCGACGGCCGCATTCGGCGACCGGCTCGCGGTCGTGCTCGGTCAGACGTGGCGCGTGTGTCCGTTCAACA
TCGTTCTGCTGTCGGCGCCCGGTTTCGTTGCGATGTTCGTCGCAATCCGGGGGTTGGCGCCCACGCGGTTGCGTACCGCG
GGCGCGGCGGCGGGGCTCGCCGCGAGTGCGATCGCGACGATCGCCTACTGCTTCCACTGCCCGGAAATGAGCCCGGCATT
CTGGGGCGTCTGGTATCTGCTCGGGATGGCGTTGCCGGCCGCACTCGGCGCACTCGTCGCTCCGATCTGGCTGCGCTGGT
GA

Upstream 100 bases:

>100_bases
TTGCCGAGGCGGCGCAACTGATCGGTGCGTCCGAATCCGTCGTCAAGGTCAGCATTCACAGGGGACTGAAGGCGCTCGCG
GCGCGCGTGCGAGGAGTGGT

Downstream 100 bases:

>100_bases
GGGGCTGGGGCGCCGTGCCTACCAGCGCAGCCAGATCGGGGCAAGCATCGCACCGAGAGCCACCGTTAGCATGAGCGACA
ACATGTACCAGACACCCCAG

Product: putative transmembrane protein DUF1109

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 213; Mature: 213

Protein sequence:

>213_residues
MKTNDFIDMLAAGVTPVERGVPARRLGSALAVAAVGAVLLMTIAFGVRPDLSAVMRTPIFWAKLAFPICVAAGAIMATVR
LARPGATVGAGRLVVGVGIAAVWIAGLYAVATAAFGDRLAVVLGQTWRVCPFNIVLLSAPGFVAMFVAIRGLAPTRLRTA
GAAAGLAASAIATIAYCFHCPEMSPAFWGVWYLLGMALPAALGALVAPIWLRW

Sequences:

>Translated_213_residues
MKTNDFIDMLAAGVTPVERGVPARRLGSALAVAAVGAVLLMTIAFGVRPDLSAVMRTPIFWAKLAFPICVAAGAIMATVR
LARPGATVGAGRLVVGVGIAAVWIAGLYAVATAAFGDRLAVVLGQTWRVCPFNIVLLSAPGFVAMFVAIRGLAPTRLRTA
GAAAGLAASAIATIAYCFHCPEMSPAFWGVWYLLGMALPAALGALVAPIWLRW
>Mature_213_residues
MKTNDFIDMLAAGVTPVERGVPARRLGSALAVAAVGAVLLMTIAFGVRPDLSAVMRTPIFWAKLAFPICVAAGAIMATVR
LARPGATVGAGRLVVGVGIAAVWIAGLYAVATAAFGDRLAVVLGQTWRVCPFNIVLLSAPGFVAMFVAIRGLAPTRLRTA
GAAAGLAASAIATIAYCFHCPEMSPAFWGVWYLLGMALPAALGALVAPIWLRW

Specific function: Unknown

COG id: COG4944

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22018; Mature: 22018

Theoretical pI: Translated: 11.25; Mature: 11.25

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTNDFIDMLAAGVTPVERGVPARRLGSALAVAAVGAVLLMTIAFGVRPDLSAVMRTPIF
CCCHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHH
WAKLAFPICVAAGAIMATVRLARPGATVGAGRLVVGVGIAAVWIAGLYAVATAAFGDRLA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
VVLGQTWRVCPFNIVLLSAPGFVAMFVAIRGLAPTRLRTAGAAAGLAASAIATIAYCFHC
HHHCCCCCCCCEEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
PEMSPAFWGVWYLLGMALPAALGALVAPIWLRW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKTNDFIDMLAAGVTPVERGVPARRLGSALAVAAVGAVLLMTIAFGVRPDLSAVMRTPIF
CCCHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCHHH
WAKLAFPICVAAGAIMATVRLARPGATVGAGRLVVGVGIAAVWIAGLYAVATAAFGDRLA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
VVLGQTWRVCPFNIVLLSAPGFVAMFVAIRGLAPTRLRTAGAAAGLAASAIATIAYCFHC
HHHCCCCCCCCEEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
PEMSPAFWGVWYLLGMALPAALGALVAPIWLRW
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA