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The map label for this gene is yaaA [C]

Identifier: 126453140

GI number: 126453140

Start: 1299390

End: 1300172

Strand: Direct

Name: yaaA [C]

Synonym: BURPS1106A_1330

Alternate gene names: 126453140

Gene position: 1299390-1300172 (Clockwise)

Preceding gene: 126454209

Following gene: 126452506

Centisome position: 32.58

GC content: 66.03

Gene sequence:

>783_bases
ATGATAATCGTTCTCTCCCCGGCGAAATCGCTCGACTACGAAACTCCGCCTCACGTTTCCCACCACACGCAGCCCCAGTT
CGCCGATGACGCGGCCGCGCTGATCGACGAGCTGCGCCGGCTGTCGCCGCAGCAGATCGCCACGCTGATGAGCATCTCCG
ACCCGCTCGCGCGCCTGAATTTCCAGCGCTACGCCGACTGGTCGCGCGCGTCGACGCCGGCGAACGCGAAGCAGGCGGTG
CTCGCATTCAACGGCGACGTCTACGAGGGCCTCGACGCACGCTCGCTGTCGCCCGATGATCTCGACTACGCGCAGCGGCA
TGTTCGCGTGCTCTCGGGGCTCTACGGGCTGCTGCGGCCGCTCGACCTGCTGCAGCCGTACCGGCTCGAGATGGGCACGC
GTTTTTCGAACGCGCGCGGCAAGGATCTGTACGCGTTTTGGGGCGAGCGGATCACGCATGCGCTGAACGCCGAGCTGAAG
ACGCGCGTCGGGGCCTCGCGCGTGCTCGTCAATTGCGCGTCGGCCGAGTATTTCAAGTCGGTGAAGCCGAAGCTGCTCGA
CGCGCGCGTCGTCACGCCGGTGTTCGAGGATTGGAAGGACGGCCGCTACAAGATCATCAGCTTTCATGCGAAGCGCGCGC
GCGGACTGATGGCGCGCTATGTCGTCGAAGGGCGGATCGACTCGCCCGACGCGCTGAAGGATTTCGCCTCGGAAGGCTAC
GCGTTCGACGCATCCGCGTCGAACGACGACACCTATGTGTTCCGCCGCCGGGCGGGCGCTTGA

Upstream 100 bases:

>100_bases
GCACCACGCGGCGACCGGCGCGGGGAGCGTCGGAGCTGGGCATTCGTTACAATCGGTGGTTTTCGTCTGATTGCGCGGCA
CGGCGTGCCGGCGAGCCTCT

Downstream 100 bases:

>100_bases
ATAGGCGGCTATCGGCGTATTCGGCGGCCCGGCGCGGCCGCCGCAACCAGGAGATGCAATGACTCTCTCGATTACGAGCA
ATTTCGATGCGGGCGCGATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MIIVLSPAKSLDYETPPHVSHHTQPQFADDAAALIDELRRLSPQQIATLMSISDPLARLNFQRYADWSRASTPANAKQAV
LAFNGDVYEGLDARSLSPDDLDYAQRHVRVLSGLYGLLRPLDLLQPYRLEMGTRFSNARGKDLYAFWGERITHALNAELK
TRVGASRVLVNCASAEYFKSVKPKLLDARVVTPVFEDWKDGRYKIISFHAKRARGLMARYVVEGRIDSPDALKDFASEGY
AFDASASNDDTYVFRRRAGA

Sequences:

>Translated_260_residues
MIIVLSPAKSLDYETPPHVSHHTQPQFADDAAALIDELRRLSPQQIATLMSISDPLARLNFQRYADWSRASTPANAKQAV
LAFNGDVYEGLDARSLSPDDLDYAQRHVRVLSGLYGLLRPLDLLQPYRLEMGTRFSNARGKDLYAFWGERITHALNAELK
TRVGASRVLVNCASAEYFKSVKPKLLDARVVTPVFEDWKDGRYKIISFHAKRARGLMARYVVEGRIDSPDALKDFASEGY
AFDASASNDDTYVFRRRAGA
>Mature_260_residues
MIIVLSPAKSLDYETPPHVSHHTQPQFADDAAALIDELRRLSPQQIATLMSISDPLARLNFQRYADWSRASTPANAKQAV
LAFNGDVYEGLDARSLSPDDLDYAQRHVRVLSGLYGLLRPLDLLQPYRLEMGTRFSNARGKDLYAFWGERITHALNAELK
TRVGASRVLVNCASAEYFKSVKPKLLDARVVTPVFEDWKDGRYKIISFHAKRARGLMARYVVEGRIDSPDALKDFASEGY
AFDASASNDDTYVFRRRAGA

Specific function: Unknown

COG id: COG3022

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0246 family [H]

Homologues:

Organism=Escherichia coli, GI1786187, Length=256, Percent_Identity=56.25, Blast_Score=310, Evalue=6e-86,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005583 [H]

Pfam domain/function: PF03883 DUF328 [H]

EC number: NA

Molecular weight: Translated: 29184; Mature: 29184

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIVLSPAKSLDYETPPHVSHHTQPQFADDAAALIDELRRLSPQQIATLMSISDPLARLN
CEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
FQRYADWSRASTPANAKQAVLAFNGDVYEGLDARSLSPDDLDYAQRHVRVLSGLYGLLRP
HHHHCCHHHCCCCCCCCEEEEEECCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LDLLQPYRLEMGTRFSNARGKDLYAFWGERITHALNAELKTRVGASRVLVNCASAEYFKS
HHHHCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
VKPKLLDARVVTPVFEDWKDGRYKIISFHAKRARGLMARYVVEGRIDSPDALKDFASEGY
CCHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
AFDASASNDDTYVFRRRAGA
EEECCCCCCCCEEEEECCCC
>Mature Secondary Structure
MIIVLSPAKSLDYETPPHVSHHTQPQFADDAAALIDELRRLSPQQIATLMSISDPLARLN
CEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
FQRYADWSRASTPANAKQAVLAFNGDVYEGLDARSLSPDDLDYAQRHVRVLSGLYGLLRP
HHHHCCHHHCCCCCCCCEEEEEECCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LDLLQPYRLEMGTRFSNARGKDLYAFWGERITHALNAELKTRVGASRVLVNCASAEYFKS
HHHHCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
VKPKLLDARVVTPVFEDWKDGRYKIISFHAKRARGLMARYVVEGRIDSPDALKDFASEGY
CCHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
AFDASASNDDTYVFRRRAGA
EEECCCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA