Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

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The map label for this gene is 126452506

Identifier: 126452506

GI number: 126452506

Start: 1300231

End: 1301385

Strand: Direct

Name: 126452506

Synonym: BURPS1106A_1331

Alternate gene names: NA

Gene position: 1300231-1301385 (Clockwise)

Preceding gene: 126453140

Following gene: 126451932

Centisome position: 32.6

GC content: 65.63

Gene sequence:

>1155_bases
ATGACTCTCTCGATTACGAGCAATTTCGATGCGGGCGCGATCGACGTCGTATCGTGCGAGCGCGCGGACGCGATCCGGCT
GCGCGTGCGCGGCGACAATCGCTCCGAATTCGCGCAGTGGTTCTACTTCCGGCTGACGGGCGCGCGCGGCGAGCGTTGCG
TGATGACATTCGAGAACGCGAACGACTGCGCGTATCCGGCCGGCTGGCGCGACTATCGCGCGGTCGCGAGCTACGACCGG
GTCAACTGGTTCCGCGTGCCGACGTCGTACGACGGGCAGATGCTGACGATCGATCATACGCCCGAATTCGACAGCATCCA
TTACGCGTATTTCGAGCCGTACAGCGAAGAGCGCCATTCCGAATTTCTCGGCGCGGTGCAGCAGATGCCGCAGGCGAGTG
TCGTCGAGCTGGGGCGCACGGTCGAAGGGCGGCCGATGTCGCTCGTCGTGCTCGGCACACCCGACGAAGCGGGCGCCGCG
AAGAAGAAAGTGTGGATCATCGCGCGCCAGCATCCGGGCGAATCGATGGCGGAATGGTTTATCGAGGGGCTCGTGAAGCG
GCTCGTCGGCTGGGGCGACTGGTCGGGCGATCCGGTCGCGCGCAAGCTGTACGACCATGCGACGTTCTACGTCGTGCCGA
ACATGAATCCGGACGGCAGCGTGCACGGCAACTTGCGCACGAACGCCGCCGGCGCGAACCTGAATCGCGAGTGGATGGAG
CCGGATGCCGAGCGCAGCCCCGAAGTGCTCGTCGTGCGCGATGCGATCCACGCGATCGGCTGCGATCTGTTTTTCGACAT
CCACGGCGACGAGGATCTGCCGTACGTGTTCGCGGCGGGCTCGGAGATGCTGCCCGGCTTCACCGAGCAGCAGCGCGTCG
AGCAGAGCGCGTTCATCGATTCGTTCAAGCGCGCGAGCCCCGATTTCCAGGACGAGCACGGCTATCCGCCCGGCAAGTAC
AGGGAGGACGCGCTCAAGCTCGCGTCGAAGTACATCGGCCATCGGTTCGGCTGCCTGTCGCTGACGCTCGAGATGCCGTT
CAAGGACAACGCGAATCTGCCCGACGAGCACGTCGGCTGGAACGGCGCGCGCAGCGCGTCGCTCGGCGCGGCGATGCTGG
GCGCGATCCTCGAGCACGTGCGGGCCTTTGCCTGA

Upstream 100 bases:

>100_bases
AACGACGACACCTATGTGTTCCGCCGCCGGGCGGGCGCTTGAATAGGCGGCTATCGGCGTATTCGGCGGCCCGGCGCGGC
CGCCGCAACCAGGAGATGCA

Downstream 100 bases:

>100_bases
GCGCGGCCCGAGCGCTCCTCCCGGTGCGGTGGATACGCGCATCGGGTCTGCATGAAAAAGCCGGAGCGGCGTTGTCGCGC
TCCGGCTTTTTTGCGTCGGG

Product: zinc carboxypeptidase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 383

Protein sequence:

>384_residues
MTLSITSNFDAGAIDVVSCERADAIRLRVRGDNRSEFAQWFYFRLTGARGERCVMTFENANDCAYPAGWRDYRAVASYDR
VNWFRVPTSYDGQMLTIDHTPEFDSIHYAYFEPYSEERHSEFLGAVQQMPQASVVELGRTVEGRPMSLVVLGTPDEAGAA
KKKVWIIARQHPGESMAEWFIEGLVKRLVGWGDWSGDPVARKLYDHATFYVVPNMNPDGSVHGNLRTNAAGANLNREWME
PDAERSPEVLVVRDAIHAIGCDLFFDIHGDEDLPYVFAAGSEMLPGFTEQQRVEQSAFIDSFKRASPDFQDEHGYPPGKY
REDALKLASKYIGHRFGCLSLTLEMPFKDNANLPDEHVGWNGARSASLGAAMLGAILEHVRAFA

Sequences:

>Translated_384_residues
MTLSITSNFDAGAIDVVSCERADAIRLRVRGDNRSEFAQWFYFRLTGARGERCVMTFENANDCAYPAGWRDYRAVASYDR
VNWFRVPTSYDGQMLTIDHTPEFDSIHYAYFEPYSEERHSEFLGAVQQMPQASVVELGRTVEGRPMSLVVLGTPDEAGAA
KKKVWIIARQHPGESMAEWFIEGLVKRLVGWGDWSGDPVARKLYDHATFYVVPNMNPDGSVHGNLRTNAAGANLNREWME
PDAERSPEVLVVRDAIHAIGCDLFFDIHGDEDLPYVFAAGSEMLPGFTEQQRVEQSAFIDSFKRASPDFQDEHGYPPGKY
REDALKLASKYIGHRFGCLSLTLEMPFKDNANLPDEHVGWNGARSASLGAAMLGAILEHVRAFA
>Mature_383_residues
TLSITSNFDAGAIDVVSCERADAIRLRVRGDNRSEFAQWFYFRLTGARGERCVMTFENANDCAYPAGWRDYRAVASYDRV
NWFRVPTSYDGQMLTIDHTPEFDSIHYAYFEPYSEERHSEFLGAVQQMPQASVVELGRTVEGRPMSLVVLGTPDEAGAAK
KKVWIIARQHPGESMAEWFIEGLVKRLVGWGDWSGDPVARKLYDHATFYVVPNMNPDGSVHGNLRTNAAGANLNREWMEP
DAERSPEVLVVRDAIHAIGCDLFFDIHGDEDLPYVFAAGSEMLPGFTEQQRVEQSAFIDSFKRASPDFQDEHGYPPGKYR
EDALKLASKYIGHRFGCLSLTLEMPFKDNANLPDEHVGWNGARSASLGAAMLGAILEHVRAFA

Specific function: Unknown

COG id: COG2866

COG function: function code E; Predicted carboxypeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI190194403, Length=352, Percent_Identity=26.7045454545455, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI222352158, Length=326, Percent_Identity=26.6871165644172, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI120444924, Length=330, Percent_Identity=26.6666666666667, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI31657119, Length=311, Percent_Identity=27.3311897106109, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI170763513, Length=330, Percent_Identity=23.9393939393939, Blast_Score=87, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI115533904, Length=364, Percent_Identity=25, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI193202888, Length=179, Percent_Identity=29.0502793296089, Blast_Score=86, Evalue=4e-17,
Organism=Drosophila melanogaster, GI28571179, Length=288, Percent_Identity=26.3888888888889, Blast_Score=88, Evalue=9e-18,
Organism=Drosophila melanogaster, GI24641847, Length=288, Percent_Identity=26.3888888888889, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI161077807, Length=288, Percent_Identity=26.3888888888889, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24641845, Length=288, Percent_Identity=26.3888888888889, Blast_Score=87, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000834 [H]

Pfam domain/function: PF00246 Peptidase_M14 [H]

EC number: NA

Molecular weight: Translated: 43076; Mature: 42944

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLSITSNFDAGAIDVVSCERADAIRLRVRGDNRSEFAQWFYFRLTGARGERCVMTFENA
CEEEEECCCCCCCEEEEECCCCCEEEEEEECCCHHHHHHEEEEEEECCCCCEEEEEECCC
NDCAYPAGWRDYRAVASYDRVNWFRVPTSYDGQMLTIDHTPEFDSIHYAYFEPYSEERHS
CCCCCCCCCHHHHHHHCCCCCEEEECCCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHH
EFLGAVQQMPQASVVELGRTVEGRPMSLVVLGTPDEAGAAKKKVWIIARQHPGESMAEWF
HHHHHHHHCCCHHHHHHCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHH
IEGLVKRLVGWGDWSGDPVARKLYDHATFYVVPNMNPDGSVHGNLRTNAAGANLNREWME
HHHHHHHHHCCCCCCCCHHHHHHHCCEEEEEECCCCCCCCEECCEECCCCCCCCCHHHCC
PDAERSPEVLVVRDAIHAIGCDLFFDIHGDEDLPYVFAAGSEMLPGFTEQQRVEQSAFID
CCCCCCCCEEEEECHHHHHCCEEEEEECCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHH
SFKRASPDFQDEHGYPPGKYREDALKLASKYIGHRFGCLSLTLEMPFKDNANLPDEHVGW
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCHHHCCC
NGARSASLGAAMLGAILEHVRAFA
CCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TLSITSNFDAGAIDVVSCERADAIRLRVRGDNRSEFAQWFYFRLTGARGERCVMTFENA
EEEEECCCCCCCEEEEECCCCCEEEEEEECCCHHHHHHEEEEEEECCCCCEEEEEECCC
NDCAYPAGWRDYRAVASYDRVNWFRVPTSYDGQMLTIDHTPEFDSIHYAYFEPYSEERHS
CCCCCCCCCHHHHHHHCCCCCEEEECCCCCCCEEEEEECCCCCCCEEEEEECCCCHHHHH
EFLGAVQQMPQASVVELGRTVEGRPMSLVVLGTPDEAGAAKKKVWIIARQHPGESMAEWF
HHHHHHHHCCCHHHHHHCCCCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHH
IEGLVKRLVGWGDWSGDPVARKLYDHATFYVVPNMNPDGSVHGNLRTNAAGANLNREWME
HHHHHHHHHCCCCCCCCHHHHHHHCCEEEEEECCCCCCCCEECCEECCCCCCCCCHHHCC
PDAERSPEVLVVRDAIHAIGCDLFFDIHGDEDLPYVFAAGSEMLPGFTEQQRVEQSAFID
CCCCCCCCEEEEECHHHHHCCEEEEEECCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHH
SFKRASPDFQDEHGYPPGKYREDALKLASKYIGHRFGCLSLTLEMPFKDNANLPDEHVGW
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCHHHCCC
NGARSASLGAAMLGAILEHVRAFA
CCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8320209 [H]