Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

Click here to switch to the map view.

The map label for this gene is yibF [C]

Identifier: 126454209

GI number: 126454209

Start: 1296556

End: 1297212

Strand: Direct

Name: yibF [C]

Synonym: BURPS1106A_1327

Alternate gene names: 126454209

Gene position: 1296556-1297212 (Clockwise)

Preceding gene: 126454706

Following gene: 126453140

Centisome position: 32.51

GC content: 63.01

Gene sequence:

>657_bases
ATGCTGCGGCTTTGTGGTTTTCCAGTGTCCAATTATTACAACAAGGTCAAGTTCGTCCTGCTCGAGCACGACATTCCGTT
CGAAGCGTCGATCGTCAGCGTCCCGATCAAGGACCCCGCGTTTTTGGCCGATACGCCGCTCGGCAAGGTGCCGTATCTGA
TGACCGAGCACGGCTCGCTGTGCGAATCGCAGGCGATCATCGAATATCTTGCCGCGATTCATCCCGACAAGCCCATTTTC
CCGGCCGATCCGTTCGCGGCGGCGAAGGCGCGCGAGATCACGGCGGTGCTCGAGCTGTACCTCGAATGGAACGTGCGCGA
ACTGTTTCCGGAGGCGTTCTTCGGCGGCAAGGTGAGCGACGGCACGAAGGCGCACGTCGAGAAGCGCATGCCGCGCGCGC
TGGACGGTTTCAAGCGGCTCGCGAAATTTTCGCCGTACGTGCTCGGCGATACGTTCTGCATTGCCGACATCGCCGCGTTC
ATCCATCTGCCGGTCGTCGCGCTCGCGACGAAGGCGATCTACGGCCGCGATTTCGTCGTCGACGCGGGGATCGACTGGAA
GGCGTACGTGAAGCGCATCGAGGAAGCGCGGCCGGCCGCGAAGCGCGTGAGCGACGAGCGCAAGGCGTTCGTCGCGGGGC
TCGCGAAGCCGGGCTGA

Upstream 100 bases:

>100_bases
CGAAGTTGCTTTAGACTAGCATGAACGTGCTTTTCGGCGTCACGTCGCCCGATGCGCGGGATACATCGCGCGCCCCTTTC
CCATGATGAAGGAGACTTCG

Downstream 100 bases:

>100_bases
CGCGGCGCGTGCAGCGTGCGCGACGGTGCGCGCGGGCGGCGCGCCGTCTTGCGCGCCGCGCGGGCGCGTGCCGCTGCGCG
CGGTGGCGCGTCGGCGGTGC

Product: glutathione S-transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MLRLCGFPVSNYYNKVKFVLLEHDIPFEASIVSVPIKDPAFLADTPLGKVPYLMTEHGSLCESQAIIEYLAAIHPDKPIF
PADPFAAAKAREITAVLELYLEWNVRELFPEAFFGGKVSDGTKAHVEKRMPRALDGFKRLAKFSPYVLGDTFCIADIAAF
IHLPVVALATKAIYGRDFVVDAGIDWKAYVKRIEEARPAAKRVSDERKAFVAGLAKPG

Sequences:

>Translated_218_residues
MLRLCGFPVSNYYNKVKFVLLEHDIPFEASIVSVPIKDPAFLADTPLGKVPYLMTEHGSLCESQAIIEYLAAIHPDKPIF
PADPFAAAKAREITAVLELYLEWNVRELFPEAFFGGKVSDGTKAHVEKRMPRALDGFKRLAKFSPYVLGDTFCIADIAAF
IHLPVVALATKAIYGRDFVVDAGIDWKAYVKRIEEARPAAKRVSDERKAFVAGLAKPG
>Mature_218_residues
MLRLCGFPVSNYYNKVKFVLLEHDIPFEASIVSVPIKDPAFLADTPLGKVPYLMTEHGSLCESQAIIEYLAAIHPDKPIF
PADPFAAAKAREITAVLELYLEWNVRELFPEAFFGGKVSDGTKAHVEKRMPRALDGFKRLAKFSPYVLGDTFCIADIAAF
IHLPVVALATKAIYGRDFVVDAGIDWKAYVKRIEEARPAAKRVSDERKAFVAGLAKPG

Specific function: Conjugation of reduced glutathione to a wide number of exogenous and endogenous hydrophobic electrophiles [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GST N-terminal domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010987
- InterPro:   IPR004045
- InterPro:   IPR017933
- InterPro:   IPR004046
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]

EC number: =2.5.1.18 [H]

Molecular weight: Translated: 24156; Mature: 24156

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRLCGFPVSNYYNKVKFVLLEHDIPFEASIVSVPIKDPAFLADTPLGKVPYLMTEHGSL
CCEEECCCHHHHHCEEEEEEEECCCCCCCEEEEECCCCCCEECCCCCCCCCEEECCCCCH
CESQAIIEYLAAIHPDKPIFPADPFAAAKAREITAVLELYLEWNVRELFPEAFFGGKVSD
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC
GTKAHVEKRMPRALDGFKRLAKFSPYVLGDTFCIADIAAFIHLPVVALATKAIYGRDFVV
CHHHHHHHHCHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
DAGIDWKAYVKRIEEARPAAKRVSDERKAFVAGLAKPG
ECCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLRLCGFPVSNYYNKVKFVLLEHDIPFEASIVSVPIKDPAFLADTPLGKVPYLMTEHGSL
CCEEECCCHHHHHCEEEEEEEECCCCCCCEEEEECCCCCCEECCCCCCCCCEEECCCCCH
CESQAIIEYLAAIHPDKPIFPADPFAAAKAREITAVLELYLEWNVRELFPEAFFGGKVSD
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCC
GTKAHVEKRMPRALDGFKRLAKFSPYVLGDTFCIADIAAFIHLPVVALATKAIYGRDFVV
CHHHHHHHHCHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
DAGIDWKAYVKRIEEARPAAKRVSDERKAFVAGLAKPG
ECCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11900268 [H]