Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

Click here to switch to the map view.

The map label for this gene is 126452720

Identifier: 126452720

GI number: 126452720

Start: 817157

End: 817906

Strand: Direct

Name: 126452720

Synonym: BURPS1106A_0835

Alternate gene names: NA

Gene position: 817157-817906 (Clockwise)

Preceding gene: 126454072

Following gene: 126452104

Centisome position: 20.49

GC content: 68.67

Gene sequence:

>750_bases
ATGCTCGCACGCCTGTCCGCCACCGACCGTTTCGCCCTCGCGCAGGGTTTCCGCGACTTTTCCCCGACGCTGATGGCGAT
CCTGTCGTGGGGGCTCGTCACCGGCATCGCAATGAGCAAATCGGTGCTGACGACGGGGCAGGCGCTCGGCATGTCGATCC
TCGTCTACGCGGGCTCGTCGCAACTCGCCGTGCTGCCGCTGTTCGCCGCGAAGCTGCCGGTCTGGACGATTCTCCTGACG
GCCGCGATGGTGAACATGCGCTTCGTGATCTTCAGCGCGGGGCTCGCACCCCATTTCTCGTATCTGCCGCTGTGGCGGCG
CCTCGCGATCGGTTATTTCAACGGCGACGTGATCTATCTGCTGTTCCAGAAGCAGGGCTTCGCCGCGGGCCACGTGCCCG
GCAAGGAGGCGTACTTCTGGGGGATGGCGCTCACGAGCTGGTTCGCGTGGCAGGCTTCGTCGCTCGTCGGCATCGCGCTC
GCGAGCGCGTTTCCCGACAGTTGGGGGCTCGCGCTCGCCGGCACGCTCGCGCTGATTCCGATCATGGTCTCGGCGATCTC
GAACCGCTCGACGCTCGCGGCCGTCGCGGTGGCGGGGATCGTGTCGCTCGTCGCGTTCGATCTGCCGTACCGGCTCGCGC
TGCCGCTCGCGGTGGTCGCGGCGCTCGCGGCGGGCAGCGCCGCCGACTGGTTCGTCGAGCGCGCCGACTGGCTGCGCATC
CGCGCGGCGCACACGGAGGACGCCGAATGA

Upstream 100 bases:

>100_bases
ACGGCGCTATAATCAACGCGCAATCTGCGTGAAAAAATAACGGACGGCGGCGCGCGACGCGCCCGAGCGTCCGGCTTTTC
GCCTTCGCGGCGCCTCCCCG

Downstream 100 bases:

>100_bases
GCGACTGGCAGGTCTGGCTCGCGATCGCCGGGATGACGCTCGTCACCGCGATCACGCGCGCGCTCTTCCTCGCGGGCGGC
GAGCGCACGGTGCTGCCCGA

Product: AzlC family protein

Products: NA

Alternate protein names: Branched-Chain Amino Acid Permease; AzlC-Like; Branched-Chain Amino Acid Transport Protein AzlC; AzlC-Like Protein; Inner Membrane Protein; AzlC Protein; Branched Chain Amino Acid Efflux Pump LivE; Inner Membrane Protein YgaZ; AzlC Family; Azaleucine Resistance Protein AzlC; Integral Membrane Protein; Azlc Family Protein; Amino Acid Permease; Branched Chain Amino Acid ABC Transporter

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MLARLSATDRFALAQGFRDFSPTLMAILSWGLVTGIAMSKSVLTTGQALGMSILVYAGSSQLAVLPLFAAKLPVWTILLT
AAMVNMRFVIFSAGLAPHFSYLPLWRRLAIGYFNGDVIYLLFQKQGFAAGHVPGKEAYFWGMALTSWFAWQASSLVGIAL
ASAFPDSWGLALAGTLALIPIMVSAISNRSTLAAVAVAGIVSLVAFDLPYRLALPLAVVAALAAGSAADWFVERADWLRI
RAAHTEDAE

Sequences:

>Translated_249_residues
MLARLSATDRFALAQGFRDFSPTLMAILSWGLVTGIAMSKSVLTTGQALGMSILVYAGSSQLAVLPLFAAKLPVWTILLT
AAMVNMRFVIFSAGLAPHFSYLPLWRRLAIGYFNGDVIYLLFQKQGFAAGHVPGKEAYFWGMALTSWFAWQASSLVGIAL
ASAFPDSWGLALAGTLALIPIMVSAISNRSTLAAVAVAGIVSLVAFDLPYRLALPLAVVAALAAGSAADWFVERADWLRI
RAAHTEDAE
>Mature_249_residues
MLARLSATDRFALAQGFRDFSPTLMAILSWGLVTGIAMSKSVLTTGQALGMSILVYAGSSQLAVLPLFAAKLPVWTILLT
AAMVNMRFVIFSAGLAPHFSYLPLWRRLAIGYFNGDVIYLLFQKQGFAAGHVPGKEAYFWGMALTSWFAWQASSLVGIAL
ASAFPDSWGLALAGTLALIPIMVSAISNRSTLAAVAVAGIVSLVAFDLPYRLALPLAVVAALAAGSAADWFVERADWLRI
RAAHTEDAE

Specific function: Unknown

COG id: COG1296

COG function: function code E; Predicted branched-chain amino acid permease (azaleucine resistance)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26571; Mature: 26571

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLARLSATDRFALAQGFRDFSPTLMAILSWGLVTGIAMSKSVLTTGQALGMSILVYAGSS
CCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCEEEEEEECCC
QLAVLPLFAAKLPVWTILLTAAMVNMRFVIFSAGLAPHFSYLPLWRRLAIGYFNGDVIYL
CEEHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHEEECCCEEEE
LFQKQGFAAGHVPGKEAYFWGMALTSWFAWQASSLVGIALASAFPDSWGLALAGTLALIP
EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
IMVSAISNRSTLAAVAVAGIVSLVAFDLPYRLALPLAVVAALAAGSAADWFVERADWLRI
HHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEE
RAAHTEDAE
EECCCCCCC
>Mature Secondary Structure
MLARLSATDRFALAQGFRDFSPTLMAILSWGLVTGIAMSKSVLTTGQALGMSILVYAGSS
CCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCEEEEEEECCC
QLAVLPLFAAKLPVWTILLTAAMVNMRFVIFSAGLAPHFSYLPLWRRLAIGYFNGDVIYL
CEEHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHEEECCCEEEE
LFQKQGFAAGHVPGKEAYFWGMALTSWFAWQASSLVGIALASAFPDSWGLALAGTLALIP
EEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
IMVSAISNRSTLAAVAVAGIVSLVAFDLPYRLALPLAVVAALAAGSAADWFVERADWLRI
HHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEE
RAAHTEDAE
EECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA