| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126452071
Identifier: 126452071
GI number: 126452071
Start: 1323218
End: 1324669
Strand: Direct
Name: 126452071
Synonym: BURPS1106A_1353
Alternate gene names: NA
Gene position: 1323218-1324669 (Clockwise)
Preceding gene: 126453199
Following gene: 126454847
Centisome position: 33.18
GC content: 68.32
Gene sequence:
>1452_bases GTGCGCGGCGCGCACGCATCGCCCGCGCCGCACGCGGGCCGGCGAACAAAAGTCGACAACGTGCGGCCGCGCGTTTCTAT AGAATCGTCGATCCTTACATATCGTTTTCAGCGAACGGACATGCGCTGCCCGCGCGGCGCGGCGCGCAACACGCGGTATC CGGCGCGTGTCGTTCGTCCGTCCTTTCATCGCAACACGCATCCGCCACCCATGGTTCGACACGCATTCGCATCGACGCCG GCGCCGAGCCGCGCCGCTTCCGTCTCCATCCTCCATCCTCGCGCGCTGGCGAGCATCGCGCTCGCCAGCGCCGTTGCATT GACCGCGGCGGGTTGCGGTGAACGCGCGGAGCCGCGGCGCGACGGCGCGACGCCCGTGCTGAGCGCATCGTTCAGGCCGA AGAGCGGGTTCGTCGTGCCCGTCTCGATCGCGGGCAAGACTTATCACTTTCTCGTCGATACGGGGGCGAGCCATACGGCG ATCGACAATCGGCTCGCGCAGTCGATCACGCGGCCGTCGACCGACGAGCAGATTCCGATCGCGTACCGGACGATGCTCGA AAAAGGCCTGACGACCGCGGACGGCGTGCTGCCGCGCGAGCGCGTGCGTCTCTGGCAGCCGCTGCCGATCGCGCTCGGCA GCTACCAGGTGCCGAGCTTCTACCCGTGGCTCGGTCTCGATCTATCGTTGCTGTCGCAGGTGCTGGGCACGCAGATCGAC GGCATCGTCGGCATCGAGATCTTTCGCCAACTGAGCTGGGTCGCCGACAATCGCAGCGGCACGCTGACCGTCTGGCGCCA TCCGCCCGCCGCGCAGCGCTTCGCGCATTGCGTCCCGTACCAGGACAGCTTCGGGCAGTCGCCCGCCGTGAGCGTCGATT TCCGCGATCGATGGACGATGTTCCGCTTCGATACCGGCGCGCGCTATTCGATCGCCTCCGCGCCGACGCTCGCGTACCTC GCGAGCCACAAGGCCGCGATGCCGCTCGGCGGCACGGTGCCCAGCATGTCGGCGAACGGCGTCGGCGAGTCGCGCGACCA TTTCGTGAGCGGACTGTCGTTCGACGGCCGGCCCGTCGGCCGCCTGCGCGTCGCCGAAGGCGGCGGCGACATGCTCGGGA TGAACTTTCTCGCGCGGCTCGACCGCTACATGTTCGTGCCGAGCACGATGGAGTTCTGCTACGACGCAGGCCGCTTCACG CAAGACGATCCGCAGCCGCTGCGCACGATCGCGATCCGCTTCGTCGACGGCCGCGTCGAGCTGTTTCACAACCGGCCGGA GGACCTGCGCCGCTACGGCCTCGAAAACGGCGACGTGCTCGTCGAGATCGACGGCAAGCGCGTCGAGGCGCCGGCGATCG ACGACGTGCGCGACCGCTTGAGCACCGCGCCCGCGGGTTCGCTCGATATCGTCGTCGAACGAGGAGGTTCGCGCCGCGCC GTGCGGATTTGA
Upstream 100 bases:
>100_bases GGCAGGCCCGCGCAGGCCCGCGCCGTTGAGCGGCGGGGCGAGCGTCGCGCGATTCGGGCGCCGTGCTCCGATGTTCTCCT ATGTCCGACCGCGCGCGGCA
Downstream 100 bases:
>100_bases CGCACGTCATGAACGGGGCCGCGCACGCGGCCGCGGGCGATGCGTTTCACGCGTCGCGACGCCCCCGACACGCGCGCGAT CGACGCGCGTAACGCCTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 483; Mature: 483
Protein sequence:
>483_residues MRGAHASPAPHAGRRTKVDNVRPRVSIESSILTYRFQRTDMRCPRGAARNTRYPARVVRPSFHRNTHPPPMVRHAFASTP APSRAASVSILHPRALASIALASAVALTAAGCGERAEPRRDGATPVLSASFRPKSGFVVPVSIAGKTYHFLVDTGASHTA IDNRLAQSITRPSTDEQIPIAYRTMLEKGLTTADGVLPRERVRLWQPLPIALGSYQVPSFYPWLGLDLSLLSQVLGTQID GIVGIEIFRQLSWVADNRSGTLTVWRHPPAAQRFAHCVPYQDSFGQSPAVSVDFRDRWTMFRFDTGARYSIASAPTLAYL ASHKAAMPLGGTVPSMSANGVGESRDHFVSGLSFDGRPVGRLRVAEGGGDMLGMNFLARLDRYMFVPSTMEFCYDAGRFT QDDPQPLRTIAIRFVDGRVELFHNRPEDLRRYGLENGDVLVEIDGKRVEAPAIDDVRDRLSTAPAGSLDIVVERGGSRRA VRI
Sequences:
>Translated_483_residues MRGAHASPAPHAGRRTKVDNVRPRVSIESSILTYRFQRTDMRCPRGAARNTRYPARVVRPSFHRNTHPPPMVRHAFASTP APSRAASVSILHPRALASIALASAVALTAAGCGERAEPRRDGATPVLSASFRPKSGFVVPVSIAGKTYHFLVDTGASHTA IDNRLAQSITRPSTDEQIPIAYRTMLEKGLTTADGVLPRERVRLWQPLPIALGSYQVPSFYPWLGLDLSLLSQVLGTQID GIVGIEIFRQLSWVADNRSGTLTVWRHPPAAQRFAHCVPYQDSFGQSPAVSVDFRDRWTMFRFDTGARYSIASAPTLAYL ASHKAAMPLGGTVPSMSANGVGESRDHFVSGLSFDGRPVGRLRVAEGGGDMLGMNFLARLDRYMFVPSTMEFCYDAGRFT QDDPQPLRTIAIRFVDGRVELFHNRPEDLRRYGLENGDVLVEIDGKRVEAPAIDDVRDRLSTAPAGSLDIVVERGGSRRA VRI >Mature_483_residues MRGAHASPAPHAGRRTKVDNVRPRVSIESSILTYRFQRTDMRCPRGAARNTRYPARVVRPSFHRNTHPPPMVRHAFASTP APSRAASVSILHPRALASIALASAVALTAAGCGERAEPRRDGATPVLSASFRPKSGFVVPVSIAGKTYHFLVDTGASHTA IDNRLAQSITRPSTDEQIPIAYRTMLEKGLTTADGVLPRERVRLWQPLPIALGSYQVPSFYPWLGLDLSLLSQVLGTQID GIVGIEIFRQLSWVADNRSGTLTVWRHPPAAQRFAHCVPYQDSFGQSPAVSVDFRDRWTMFRFDTGARYSIASAPTLAYL ASHKAAMPLGGTVPSMSANGVGESRDHFVSGLSFDGRPVGRLRVAEGGGDMLGMNFLARLDRYMFVPSTMEFCYDAGRFT QDDPQPLRTIAIRFVDGRVELFHNRPEDLRRYGLENGDVLVEIDGKRVEAPAIDDVRDRLSTAPAGSLDIVVERGGSRRA VRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53006; Mature: 53006
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: PS00141 ASP_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGAHASPAPHAGRRTKVDNVRPRVSIESSILTYRFQRTDMRCPRGAARNTRYPARVVRP CCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEEECCCCCCCCCCCCCCCCCHHHCCC SFHRNTHPPPMVRHAFASTPAPSRAASVSILHPRALASIALASAVALTAAGCGERAEPRR CCCCCCCCCHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCC DGATPVLSASFRPKSGFVVPVSIAGKTYHFLVDTGASHTAIDNRLAQSITRPSTDEQIPI CCCCCEEECCCCCCCCCEEEEEECCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCH AYRTMLEKGLTTADGVLPRERVRLWQPLPIALGSYQVPSFYPWLGLDLSLLSQVLGTQID HHHHHHHHCCCCCCCCCCHHHHHHCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHCCCCC GIVGIEIFRQLSWVADNRSGTLTVWRHPPAAQRFAHCVPYQDSFGQSPAVSVDFRDRWTM CCHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHCCCCHHHCCCCCEEEEEECCCEEE FRFDTGARYSIASAPTLAYLASHKAAMPLGGTVPSMSANGVGESRDHFVSGLSFDGRPVG EEECCCCCEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCC RLRVAEGGGDMLGMNFLARLDRYMFVPSTMEFCYDAGRFTQDDPQPLRTIAIRFVDGRVE EEEEECCCCCHHHHHHHHHHHHHEECCCHHHHHHCCCCCCCCCCHHHEEEEEEEECCEEE LFHNRPEDLRRYGLENGDVLVEIDGKRVEAPAIDDVRDRLSTAPAGSLDIVVERGGSRRA EECCCCHHHHHHCCCCCCEEEEECCCEECCCCHHHHHHHHHCCCCCCEEEEEECCCCCCE VRI ECC >Mature Secondary Structure MRGAHASPAPHAGRRTKVDNVRPRVSIESSILTYRFQRTDMRCPRGAARNTRYPARVVRP CCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEEEEECCCCCCCCCCCCCCCCCHHHCCC SFHRNTHPPPMVRHAFASTPAPSRAASVSILHPRALASIALASAVALTAAGCGERAEPRR CCCCCCCCCHHHHHHHHCCCCCCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCC DGATPVLSASFRPKSGFVVPVSIAGKTYHFLVDTGASHTAIDNRLAQSITRPSTDEQIPI CCCCCEEECCCCCCCCCEEEEEECCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCH AYRTMLEKGLTTADGVLPRERVRLWQPLPIALGSYQVPSFYPWLGLDLSLLSQVLGTQID HHHHHHHHCCCCCCCCCCHHHHHHCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHCCCCC GIVGIEIFRQLSWVADNRSGTLTVWRHPPAAQRFAHCVPYQDSFGQSPAVSVDFRDRWTM CCHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHCCCCHHHCCCCCEEEEEECCCEEE FRFDTGARYSIASAPTLAYLASHKAAMPLGGTVPSMSANGVGESRDHFVSGLSFDGRPVG EEECCCCCEEECCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCC RLRVAEGGGDMLGMNFLARLDRYMFVPSTMEFCYDAGRFTQDDPQPLRTIAIRFVDGRVE EEEEECCCCCHHHHHHHHHHHHHEECCCHHHHHHCCCCCCCCCCHHHEEEEEEEECCEEE LFHNRPEDLRRYGLENGDVLVEIDGKRVEAPAIDDVRDRLSTAPAGSLDIVVERGGSRRA EECCCCHHHHHHCCCCCCEEEEECCCEECCCCHHHHHHHHHCCCCCCEEEEEECCCCCCE VRI ECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA