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The map label for this gene is cc4 [H]

Identifier: 126454847

GI number: 126454847

Start: 1325089

End: 1325799

Strand: Direct

Name: cc4 [H]

Synonym: BURPS1106A_1355

Alternate gene names: 126454847

Gene position: 1325089-1325799 (Clockwise)

Preceding gene: 126452071

Following gene: 126452004

Centisome position: 33.22

GC content: 72.01

Gene sequence:

>711_bases
GTGACCTCGAGACCCACCGCTGTACTTGCCGTACTGTGCGGCTTGCTGAGCCAGACGGCGCTATCCCAGGAACCGCAGAC
CGAGCGCGCGCCCGACACGATGGAGGCGCGCGTGCTGGCGTGCGCCGCGTGCCACGGCCGGCAGGGCGAGGGGACGTCGA
ACGACTACTTTCCGCGCCTGTCCGGCAAGCCCGCCGGCTATCTGTACAACCAGCTCGTCGCGTTCCGCGACGGCCGGCGC
AAGTATCCGCCGATGAACTACCTGCTCGCGTATCTGCCCGACGCGTACCTGCGCAAGATCGCCGATCACTTCGCGAGCCG
GCGGCCGCCGTTCCCGACGATCGCGGCGCCCGCCGCCGCGCCGGCGGTGCTCGAGCGGGGCCGGCTGCTCGTCAAGTCGG
GCGACCCCTCGCACAAGATTCCCGCGTGCGCGTCGTGCCACGGCGCGTCGCTGACGGGCATGGAGCCCGCCGTGCCGGGC
CTGCTCGGCCTGCATGCCGAATACCTGAGCGCGCAGCTCGGCGCATGGCGTTACGGCACGCGCACGTCGATCGCGCCGGA
CTGCATGCAGCAGGTCGCGTCGCGCCTCACCGACACGGACGTGACCGCCATCTCCGCGTGGCTCGCTTCGCAGCCCGCGC
CCGCGAACCCGTCGCCCGCCCCCGCGGGCTCGCTCGACATGCCGCTCGCATGCGGTAGCGAACCGCGTTAA

Upstream 100 bases:

>100_bases
TGAAAGCGATGGTGCCGCCGACGTACCCGCTTCCCCCACGGGCCGCAGGGGCGGCTCGCGTCGCTGGCGGGAACTGCACG
CCTTCCCGGAGAGGATGACA

Downstream 100 bases:

>100_bases
TGGAGGCCTCGGTGCACAAGCATTTGATCGTCAAATTCCGCAGCGCGTGCGCGAATGCCGCGCTCGGGCTGCTCGCGGCG
ACGCTCGCCGCATCCGCCGT

Product: putative cytochrome c

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MTSRPTAVLAVLCGLLSQTALSQEPQTERAPDTMEARVLACAACHGRQGEGTSNDYFPRLSGKPAGYLYNQLVAFRDGRR
KYPPMNYLLAYLPDAYLRKIADHFASRRPPFPTIAAPAAAPAVLERGRLLVKSGDPSHKIPACASCHGASLTGMEPAVPG
LLGLHAEYLSAQLGAWRYGTRTSIAPDCMQQVASRLTDTDVTAISAWLASQPAPANPSPAPAGSLDMPLACGSEPR

Sequences:

>Translated_236_residues
MTSRPTAVLAVLCGLLSQTALSQEPQTERAPDTMEARVLACAACHGRQGEGTSNDYFPRLSGKPAGYLYNQLVAFRDGRR
KYPPMNYLLAYLPDAYLRKIADHFASRRPPFPTIAAPAAAPAVLERGRLLVKSGDPSHKIPACASCHGASLTGMEPAVPG
LLGLHAEYLSAQLGAWRYGTRTSIAPDCMQQVASRLTDTDVTAISAWLASQPAPANPSPAPAGSLDMPLACGSEPR
>Mature_235_residues
TSRPTAVLAVLCGLLSQTALSQEPQTERAPDTMEARVLACAACHGRQGEGTSNDYFPRLSGKPAGYLYNQLVAFRDGRRK
YPPMNYLLAYLPDAYLRKIADHFASRRPPFPTIAAPAAAPAVLERGRLLVKSGDPSHKIPACASCHGASLTGMEPAVPGL
LGLHAEYLSAQLGAWRYGTRTSIAPDCMQQVASRLTDTDVTAISAWLASQPAPANPSPAPAGSLDMPLACGSEPR

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 25042; Mature: 24911

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSRPTAVLAVLCGLLSQTALSQEPQTERAPDTMEARVLACAACHGRQGEGTSNDYFPRL
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
SGKPAGYLYNQLVAFRDGRRKYPPMNYLLAYLPDAYLRKIADHFASRRPPFPTIAAPAAA
CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHH
PAVLERGRLLVKSGDPSHKIPACASCHGASLTGMEPAVPGLLGLHAEYLSAQLGAWRYGT
HHHHHCCEEEEECCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
RTSIAPDCMQQVASRLTDTDVTAISAWLASQPAPANPSPAPAGSLDMPLACGSEPR
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TSRPTAVLAVLCGLLSQTALSQEPQTERAPDTMEARVLACAACHGRQGEGTSNDYFPRL
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCC
SGKPAGYLYNQLVAFRDGRRKYPPMNYLLAYLPDAYLRKIADHFASRRPPFPTIAAPAAA
CCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHH
PAVLERGRLLVKSGDPSHKIPACASCHGASLTGMEPAVPGLLGLHAEYLSAQLGAWRYGT
HHHHHCCEEEEECCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
RTSIAPDCMQQVASRLTDTDVTAISAWLASQPAPANPSPAPAGSLDMPLACGSEPR
CCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]