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The map label for this gene is yrhP [H]

Identifier: 126451862

GI number: 126451862

Start: 152975

End: 153610

Strand: Direct

Name: yrhP [H]

Synonym: BURPS1106A_0162

Alternate gene names: 126451862

Gene position: 152975-153610 (Clockwise)

Preceding gene: 126454119

Following gene: 126452704

Centisome position: 3.84

GC content: 66.82

Gene sequence:

>636_bases
ATGTTCGGCATCACCCATCTTGGCTTGTTCATGGCGGCGGTCTTTCTGCTGAACATCACGCCGGGGCCCGACACCGCGTA
CATCGTCGGCCGCAGCGTCGCGCAGGGGCGCGGCGCCGGCCTCATGTCCGCGCTCGGCATCTCGGCCGGCTGCTGCGTGC
ACGTGCTCGCATGCGCTTTCGGCCTGACGGCGGTGCTCGCCGCGTCGGCCACCGCGTTCACGGTGATCAAGGTCGTCGGC
GCGGCCTATCTCGTCTATCTGGGCGTGCGTCTCATCTTCGCCAAGCAGGAGCCGGCGGCCGAGCGGCCCGCGCGGCGAGG
CGCGGACAAATCGCTGCGCCAGCTGTTCATGCAGGGGTTCCTGACCAATGTGCTGAACCCGAAGGTGGTGCTGTTCTTCG
TGTCGTTCTTTCCTCAGTTCGTATCGGTCGACAGCAACCACAAGGTGCTCGCGTTCCTGACGCTCGGCGCGGTGTTCCTC
GCGATGAGCACCGTGTGGTCGTGCACCGTGGCGTGGGTCGCGGGCACCGTCACGCGACGTTTTGCCGGCAAGCCTGGTGT
GAAGAAATGGCTCGACCGCGGTGTCGGCAGCGCATTCGTCGGCCTGGGCGTCAAGCTCGCGACGTCGACGCGCTGA

Upstream 100 bases:

>100_bases
TCATCGGAATCGCGCGCGCCGCGCAATCGGCCGAACGGCCAGGTCGCGGCGCGCCGGGCGCGCGCGTAGAATTCTCTGAC
ACCAGCATCGAGGGAGCGGC

Downstream 100 bases:

>100_bases
GGATTGAATTTTCTCGAAACGTTCTTATCTAACAGATCGCTTACAATCATGCGCCGCCGCCGCTCGCGCGTGCGGTGCGA
TCCCCGCAGACGGATAAGGA

Product: LysE family translocator protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MFGITHLGLFMAAVFLLNITPGPDTAYIVGRSVAQGRGAGLMSALGISAGCCVHVLACAFGLTAVLAASATAFTVIKVVG
AAYLVYLGVRLIFAKQEPAAERPARRGADKSLRQLFMQGFLTNVLNPKVVLFFVSFFPQFVSVDSNHKVLAFLTLGAVFL
AMSTVWSCTVAWVAGTVTRRFAGKPGVKKWLDRGVGSAFVGLGVKLATSTR

Sequences:

>Translated_211_residues
MFGITHLGLFMAAVFLLNITPGPDTAYIVGRSVAQGRGAGLMSALGISAGCCVHVLACAFGLTAVLAASATAFTVIKVVG
AAYLVYLGVRLIFAKQEPAAERPARRGADKSLRQLFMQGFLTNVLNPKVVLFFVSFFPQFVSVDSNHKVLAFLTLGAVFL
AMSTVWSCTVAWVAGTVTRRFAGKPGVKKWLDRGVGSAFVGLGVKLATSTR
>Mature_211_residues
MFGITHLGLFMAAVFLLNITPGPDTAYIVGRSVAQGRGAGLMSALGISAGCCVHVLACAFGLTAVLAASATAFTVIKVVG
AAYLVYLGVRLIFAKQEPAAERPARRGADKSLRQLFMQGFLTNVLNPKVVLFFVSFFPQFVSVDSNHKVLAFLTLGAVFL
AMSTVWSCTVAWVAGTVTRRFAGKPGVKKWLDRGVGSAFVGLGVKLATSTR

Specific function: Unknown

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

Organism=Escherichia coli, GI1788099, Length=211, Percent_Identity=26.5402843601896, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI48994979, Length=200, Percent_Identity=25.5, Blast_Score=75, Evalue=2e-15,
Organism=Escherichia coli, GI48994978, Length=192, Percent_Identity=29.1666666666667, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1786522, Length=163, Percent_Identity=28.2208588957055, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004778
- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 22264; Mature: 22264

Theoretical pI: Translated: 11.08; Mature: 11.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGITHLGLFMAAVFLLNITPGPDTAYIVGRSVAQGRGAGLMSALGISAGCCVHVLACAF
CCCHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHCCCCCHHHHHHCCCHHHHHHHHHHHH
GLTAVLAASATAFTVIKVVGAAYLVYLGVRLIFAKQEPAAERPARRGADKSLRQLFMQGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHH
LTNVLNPKVVLFFVSFFPQFVSVDSNHKVLAFLTLGAVFLAMSTVWSCTVAWVAGTVTRR
HHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAGKPGVKKWLDRGVGSAFVGLGVKLATSTR
HCCCCCHHHHHHCCCCHHHHHCCEEECCCCC
>Mature Secondary Structure
MFGITHLGLFMAAVFLLNITPGPDTAYIVGRSVAQGRGAGLMSALGISAGCCVHVLACAF
CCCHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHCCCCCHHHHHHCCCHHHHHHHHHHHH
GLTAVLAASATAFTVIKVVGAAYLVYLGVRLIFAKQEPAAERPARRGADKSLRQLFMQGF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHHHHH
LTNVLNPKVVLFFVSFFPQFVSVDSNHKVLAFLTLGAVFLAMSTVWSCTVAWVAGTVTRR
HHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAGKPGVKKWLDRGVGSAFVGLGVKLATSTR
HCCCCCHHHHHHCCCCHHHHHCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377; 9308178 [H]