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The map label for this gene is cobC [C]

Identifier: 126451705

GI number: 126451705

Start: 1015425

End: 1016024

Strand: Direct

Name: cobC [C]

Synonym: BURPS1106A_1039

Alternate gene names: 126451705

Gene position: 1015425-1016024 (Clockwise)

Preceding gene: 126452810

Following gene: 126451503

Centisome position: 25.46

GC content: 74.83

Gene sequence:

>600_bases
ATGGATGTCGTCCTGATCCGCCATCCGGCGGTCGCGCTCGGCACGGGCGTCTGCTACGGCGCGAGCGACGTGCCGCTCGC
GGCCGGCGCGGCGGCGGGCGCGGCCGGCATTCGGCGGCGGCTGCGCTCGCTCGGCGTCGCGCGCGCGTCGCGCGTGTGGT
CGAGCCCGCTCGCGCGCTGCGCGGACGTCGCGCGCGCGCTGGCGGGCGGCGTGCGCGCGCCGCTCGAGATCGATCCGCGC
CTGCGCGAAATCGATTTCGGCGCGTGGGAGATGCAAAGCTGGGACGCGATCGGCCGCGACGCGCTCGATCGATGGAGTGC
CGATCTGATGCACGCGCGCGAGCACGGCGGGGAGAGCGCCGCGCAGTTCGTCGCGCGCGTGCGGCCTGCGTTCGCGACGC
TCGCCGTCGCGGCGCGCACGAGCTGGGTGCTCACGCATGCGGGCGTGATCCGCGCGCTGGCGTCGCACGCGCTCGATGCG
CCGCTCGACGCGATGCTCGCGCGGCCGATCGCGATGGGCGGCATCGTATGGTTGCGGTGCGACGAAGGTGGCGACAGCGA
TTGCGCTCGCGGCTGGCGAATCGCGCATTGGGACGAATGA

Upstream 100 bases:

>100_bases
TCGCGCGTTATCTCGACGCGCGCATCGGCGGCTATACCGGCGATTGTCTCGGCTTCGCGCAGCAGGTGTTCGAGCTGTCG
ATCTATCTGGCGATGCTCGG

Downstream 100 bases:

>100_bases
CGCGCGCGCTCGCGCGTCCCGCCGCGTCGTCGGGCGCATCGCGATTGCCGCCGCTCCAGGCGGGCGGGCGCGGCGCGCCG
CTTCGGCGACGGCGGTTTGC

Product: alpha-ribazole phosphatase

Products: NA

Alternate protein names: Alpha-Ribazole Phosphatase; Phosphoglycerate Mutase Family Protein; Phosphoglycerate/Bisphosphoglycerate Mutase; Alpha-Ribazole-5-Phosphate Phosphatase; Alpha-Ribazole-5`-Phosphate Phosphatase CobC; Phosphoglycerate Mutase 2 Protein; Phosphoglycerate Mutase Protein; Alpha-Ribazole-5-Phosphate Phosphohydrolase; Phosphoglycerate Mutase Family

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MDVVLIRHPAVALGTGVCYGASDVPLAAGAAAGAAGIRRRLRSLGVARASRVWSSPLARCADVARALAGGVRAPLEIDPR
LREIDFGAWEMQSWDAIGRDALDRWSADLMHAREHGGESAAQFVARVRPAFATLAVAARTSWVLTHAGVIRALASHALDA
PLDAMLARPIAMGGIVWLRCDEGGDSDCARGWRIAHWDE

Sequences:

>Translated_199_residues
MDVVLIRHPAVALGTGVCYGASDVPLAAGAAAGAAGIRRRLRSLGVARASRVWSSPLARCADVARALAGGVRAPLEIDPR
LREIDFGAWEMQSWDAIGRDALDRWSADLMHAREHGGESAAQFVARVRPAFATLAVAARTSWVLTHAGVIRALASHALDA
PLDAMLARPIAMGGIVWLRCDEGGDSDCARGWRIAHWDE
>Mature_199_residues
MDVVLIRHPAVALGTGVCYGASDVPLAAGAAAGAAGIRRRLRSLGVARASRVWSSPLARCADVARALAGGVRAPLEIDPR
LREIDFGAWEMQSWDAIGRDALDRWSADLMHAREHGGESAAQFVARVRPAFATLAVAARTSWVLTHAGVIRALASHALDA
PLDAMLARPIAMGGIVWLRCDEGGDSDCARGWRIAHWDE

Specific function: Converts N1-(5-Phospho-Alpha-D-Ribosyl)-5,6- Dimethylbenzimidazole Into N1-Alpha-D-Ribosyl-5,6- Dimethylbenzimidazole; Involved In The Assembly Of The Nucleotide Loop Of Cobalamin. [C]

COG id: COG0406

COG function: function code G; Fructose-2,6-bisphosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.3.73 [C]

Molecular weight: Translated: 21162; Mature: 21162

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDVVLIRHPAVALGTGVCYGASDVPLAAGAAAGAAGIRRRLRSLGVARASRVWSSPLARC
CCEEEEECCCHHHHCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADVARALAGGVRAPLEIDPRLREIDFGAWEMQSWDAIGRDALDRWSADLMHAREHGGESA
HHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
AQFVARVRPAFATLAVAARTSWVLTHAGVIRALASHALDAPLDAMLARPIAMGGIVWLRC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEEE
DEGGDSDCARGWRIAHWDE
CCCCCHHHHCCCCCCCCCC
>Mature Secondary Structure
MDVVLIRHPAVALGTGVCYGASDVPLAAGAAAGAAGIRRRLRSLGVARASRVWSSPLARC
CCEEEEECCCHHHHCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADVARALAGGVRAPLEIDPRLREIDFGAWEMQSWDAIGRDALDRWSADLMHAREHGGESA
HHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
AQFVARVRPAFATLAVAARTSWVLTHAGVIRALASHALDAPLDAMLARPIAMGGIVWLRC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEEE
DEGGDSDCARGWRIAHWDE
CCCCCHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA