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The map label for this gene is cobQ [H]

Identifier: 126451503

GI number: 126451503

Start: 1020675

End: 1022282

Strand: Direct

Name: cobQ [H]

Synonym: BURPS1106A_1045

Alternate gene names: 126451503

Gene position: 1020675-1022282 (Clockwise)

Preceding gene: 126451705

Following gene: 126451717

Centisome position: 25.59

GC content: 72.14

Gene sequence:

>1608_bases
ATGCGGCCTTCGCCATTTGCCGCGCGCCGCGCGTCGCGCCATTCGTTCACGATGATTGCCAACGCCAACGCCAACGCCAA
CGCCAACGCCAACGCCAACGCCAACGCCAACGCCAACGCCAACGCCGCCCGTCCGCGCGGCACGCTGATGATCCAGGGCA
CGACGTCCGACGCGGGCAAGAGCACGCTCGTCGCGGGCCTGTGCCGGCTCGCGCGCCGCACGGGCGCGCGCGTCGCGCCG
TTCAAGCCGCAGAACATGGCGCTCAACAGCGCGGTGACGGCGAACGGCGGCGAGATCGGCCGCGCGCAGGCGCTGCAGGC
ACTCGCGGCGGGCATCGAAGCGCATACCGATCTGAACCCGGTGCTGCTGAAGCCGACGGGCGATCGCGGCGCGCAGGTGA
TCATCCACGGCAAGGCGCGCGCGAACCTGGACGCGCGCGCCTATCACGACTACAAGCCGACCGCGATGCGGGCGGTGCTC
GAATCGTACGGCCGGCTGCGCGGCGCGTACGACGCGGTGATCGTCGAAGGGGCGGGCAGCCCTGCCGAGATCAACCTGCG
CGAAGGCGATATCGCGAACATGGGTTTCGCCGAAGCGGTCGATTGCCCGGTCGTGCTCGTCGCGGACATCGATCGCGGCG
GCGTGTTCGCGCATCTCGTCGGCACGCTCGCGTGCCTGTCGGACAGCGAGCGCGCGCGCGTGCGCGGCTTCGTGATCAAC
CGCTTTCGCGGCGATCCGGCACTGCTCGAGCCGGGGCTGCGCTGGCTCGAGGCGCGGACCGGCAAGCCCGTGCTCGGCGT
GCTGCCCTATTTGCACGGGCTCACGCTCGACGCCGAGGACATGCTGCCCGCGAGCGCGCGCACGTCGGCGGCGCGGCGCG
ACGCGGGCGTGCTGCGCATCGTCGTGCCCGCGTTGCCGCGCATCAGCAACCATACCGATTTCGACGCGTTGCGCGCGCAT
CCGCGCGTCGATTTCACGTACTGGAGGCGCGGGCCCGTGCCCGACGCCGATCTGCTGATCCTGCCCGGCTCGAAGAACGT
GCTCGCCGATCTCGCGTGGCTGCGCGACGCGGGCTGGGACGCGCTGATCAAGCGCCATCTGCGCTACGGCGGCAAGGTGA
TCGGCATCTGCGGCGGCATGCAGATGCTCGGCCGCACGCTGGCCGATCCGCACGGTGTCGAGGGCGCGGCCGGCGCGACG
AGCGCGGGCCTCGGCCTGCTCGACTACGCGACGACGCTGACCCCGGAGAAGACGCTCGTCAACGCGGCGGGGCGGCTCGC
GTTCGGCGGCGACGCGCGCGTCGCGGGCTACGAGATCCATATGGGCCGAACCGAAGGGCCGGCGCTCGCGTCGCCCGCGC
TCATGCTCGCGGGGCGCGGCGGCGAGCGGCCCGACGGCGCGGTGTCGGCGGACGGGCAGATTCTCGCGACCTACCTGCAC
GGGCTTTTCGACACGCCGCACGCATGCGCGGCGCTGCTCGAATGGGCGGGGCTCGACGGCGCGGAGGCGCTCGACTATCC
GGCGCTGCGCGAGGCGTCGCTCGAGCGGCTCGCCGACACGTTCGCCGAGCATCTCGATCTCGATCGCGTGTTCGCGGCGT
TCGCGTGA

Upstream 100 bases:

>100_bases
CGAGCCGTTCGGCGTGCGCGCTCTTGCCCGAGCGCGCGCCGCCGAGAACGAAGGTGAGGTCGCGCGGAATCATCGCGTGA
TTGTAACGGGCCGCGCGATA

Downstream 100 bases:

>100_bases
CGGGCGGGCGGCATTGGCTCCGCCGCGGAGGGCAAGGAGCGCGGGGCGGGCGTCGAGCGCCGTGGCGTGGGGCTCCGACT
TGTTAAGAGCGGAGCGCGGG

Product: cobyric acid synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 535; Mature: 535

Protein sequence:

>535_residues
MRPSPFAARRASRHSFTMIANANANANANANANANANANANAARPRGTLMIQGTTSDAGKSTLVAGLCRLARRTGARVAP
FKPQNMALNSAVTANGGEIGRAQALQALAAGIEAHTDLNPVLLKPTGDRGAQVIIHGKARANLDARAYHDYKPTAMRAVL
ESYGRLRGAYDAVIVEGAGSPAEINLREGDIANMGFAEAVDCPVVLVADIDRGGVFAHLVGTLACLSDSERARVRGFVIN
RFRGDPALLEPGLRWLEARTGKPVLGVLPYLHGLTLDAEDMLPASARTSAARRDAGVLRIVVPALPRISNHTDFDALRAH
PRVDFTYWRRGPVPDADLLILPGSKNVLADLAWLRDAGWDALIKRHLRYGGKVIGICGGMQMLGRTLADPHGVEGAAGAT
SAGLGLLDYATTLTPEKTLVNAAGRLAFGGDARVAGYEIHMGRTEGPALASPALMLAGRGGERPDGAVSADGQILATYLH
GLFDTPHACAALLEWAGLDGAEALDYPALREASLERLADTFAEHLDLDRVFAAFA

Sequences:

>Translated_535_residues
MRPSPFAARRASRHSFTMIANANANANANANANANANANANAARPRGTLMIQGTTSDAGKSTLVAGLCRLARRTGARVAP
FKPQNMALNSAVTANGGEIGRAQALQALAAGIEAHTDLNPVLLKPTGDRGAQVIIHGKARANLDARAYHDYKPTAMRAVL
ESYGRLRGAYDAVIVEGAGSPAEINLREGDIANMGFAEAVDCPVVLVADIDRGGVFAHLVGTLACLSDSERARVRGFVIN
RFRGDPALLEPGLRWLEARTGKPVLGVLPYLHGLTLDAEDMLPASARTSAARRDAGVLRIVVPALPRISNHTDFDALRAH
PRVDFTYWRRGPVPDADLLILPGSKNVLADLAWLRDAGWDALIKRHLRYGGKVIGICGGMQMLGRTLADPHGVEGAAGAT
SAGLGLLDYATTLTPEKTLVNAAGRLAFGGDARVAGYEIHMGRTEGPALASPALMLAGRGGERPDGAVSADGQILATYLH
GLFDTPHACAALLEWAGLDGAEALDYPALREASLERLADTFAEHLDLDRVFAAFA
>Mature_535_residues
MRPSPFAARRASRHSFTMIANANANANANANANANANANANAARPRGTLMIQGTTSDAGKSTLVAGLCRLARRTGARVAP
FKPQNMALNSAVTANGGEIGRAQALQALAAGIEAHTDLNPVLLKPTGDRGAQVIIHGKARANLDARAYHDYKPTAMRAVL
ESYGRLRGAYDAVIVEGAGSPAEINLREGDIANMGFAEAVDCPVVLVADIDRGGVFAHLVGTLACLSDSERARVRGFVIN
RFRGDPALLEPGLRWLEARTGKPVLGVLPYLHGLTLDAEDMLPASARTSAARRDAGVLRIVVPALPRISNHTDFDALRAH
PRVDFTYWRRGPVPDADLLILPGSKNVLADLAWLRDAGWDALIKRHLRYGGKVIGICGGMQMLGRTLADPHGVEGAAGAT
SAGLGLLDYATTLTPEKTLVNAAGRLAFGGDARVAGYEIHMGRTEGPALASPALMLAGRGGERPDGAVSADGQILATYLH
GLFDTPHACAALLEWAGLDGAEALDYPALREASLERLADTFAEHLDLDRVFAAFA

Specific function: Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation [H]

COG id: COG1492

COG function: function code H; Cobyric acid synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GATase cobBQ-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR017929
- InterPro:   IPR004459
- InterPro:   IPR011698 [H]

Pfam domain/function: PF01656 CbiA; PF07685 GATase_3 [H]

EC number: NA

Molecular weight: Translated: 56341; Mature: 56341

Theoretical pI: Translated: 8.24; Mature: 8.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPSPFAARRASRHSFTMIANANANANANANANANANANANAARPRGTLMIQGTTSDAGK
CCCCCCHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCH
STLVAGLCRLARRTGARVAPFKPQNMALNSAVTANGGEIGRAQALQALAAGIEAHTDLNP
HHHHHHHHHHHHHCCCCCCCCCCCCCEECCEEECCCCCCHHHHHHHHHHHHHHHCCCCCC
VLLKPTGDRGAQVIIHGKARANLDARAYHDYKPTAMRAVLESYGRLRGAYDAVIVEGAGS
EEEEECCCCCCEEEEECCCCCCCCHHEECCCCHHHHHHHHHHHHHHCCCEEEEEEECCCC
PAEINLREGDIANMGFAEAVDCPVVLVADIDRGGVFAHLVGTLACLSDSERARVRGFVIN
CCEEEECCCCCCCCCCHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHEEEEE
RFRGDPALLEPGLRWLEARTGKPVLGVLPYLHGLTLDAEDMLPASARTSAARRDAGVLRI
ECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHCCCEEEE
VVPALPRISNHTDFDALRAHPRVDFTYWRRGPVPDADLLILPGSKNVLADLAWLRDAGWD
EECCCCCCCCCCCHHHHHCCCCCCEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHCCHH
ALIKRHLRYGGKVIGICGGMQMLGRTLADPHGVEGAAGATSAGLGLLDYATTLTPEKTLV
HHHHHHHHHCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHH
NAAGRLAFGGDARVAGYEIHMGRTEGPALASPALMLAGRGGERPDGAVSADGQILATYLH
HHCCCEEECCCCEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHH
GLFDTPHACAALLEWAGLDGAEALDYPALREASLERLADTFAEHLDLDRVFAAFA
HHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHCC
>Mature Secondary Structure
MRPSPFAARRASRHSFTMIANANANANANANANANANANANAARPRGTLMIQGTTSDAGK
CCCCCCHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCH
STLVAGLCRLARRTGARVAPFKPQNMALNSAVTANGGEIGRAQALQALAAGIEAHTDLNP
HHHHHHHHHHHHHCCCCCCCCCCCCCEECCEEECCCCCCHHHHHHHHHHHHHHHCCCCCC
VLLKPTGDRGAQVIIHGKARANLDARAYHDYKPTAMRAVLESYGRLRGAYDAVIVEGAGS
EEEEECCCCCCEEEEECCCCCCCCHHEECCCCHHHHHHHHHHHHHHCCCEEEEEEECCCC
PAEINLREGDIANMGFAEAVDCPVVLVADIDRGGVFAHLVGTLACLSDSERARVRGFVIN
CCEEEECCCCCCCCCCHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHEEEEE
RFRGDPALLEPGLRWLEARTGKPVLGVLPYLHGLTLDAEDMLPASARTSAARRDAGVLRI
ECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHCCCEEEE
VVPALPRISNHTDFDALRAHPRVDFTYWRRGPVPDADLLILPGSKNVLADLAWLRDAGWD
EECCCCCCCCCCCHHHHHCCCCCCEEEECCCCCCCCCEEEECCCCHHHHHHHHHHHCCHH
ALIKRHLRYGGKVIGICGGMQMLGRTLADPHGVEGAAGATSAGLGLLDYATTLTPEKTLV
HHHHHHHHHCCEEEEEECCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHH
NAAGRLAFGGDARVAGYEIHMGRTEGPALASPALMLAGRGGERPDGAVSADGQILATYLH
HHCCCEEECCCCEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHH
GLFDTPHACAALLEWAGLDGAEALDYPALREASLERLADTFAEHLDLDRVFAAFA
HHCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA