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The map label for this gene is bkdR [H]

Identifier: 126447872

GI number: 126447872

Start: 660020

End: 660484

Strand: Reverse

Name: bkdR [H]

Synonym: BMA10247_A0711

Alternate gene names: 126447872

Gene position: 660484-660020 (Counterclockwise)

Preceding gene: 126447480

Following gene: 126446156

Centisome position: 28.07

GC content: 67.1

Gene sequence:

>465_bases
ATGATCGAACTCGACAAAACCGACCGCGCCATTCTCGCCGCAGTGCAGCTCGACGGCCGCATCCCGGTCGCCCGCCTCGC
CGATTCGGTGGGCCTGAGCGAAACGCCGTGCGCGCGCCGGCTCAAACGCCTCGAAAGCGACGGCTACATCGAACGCTATC
GCGCGCAGCTCTCGCGCAACGCGCTTGGCTTCGGCGTCGTCGCGTTCGTGCTGCTGCGCTGCTCGGTTCACGATCGCAGC
GTCGCGAACCGCTTCGAGCGCGAGGTGCTCGGCATTCCGCGCATCCTGTCGTGCCACAACGTGTCGGGGTCCGCCGACTA
TCTGCTGCAAGTGGTCGCGCACGATCTCGACGACTACGGCACGTTCCTGCGCGAGACGCTGCGCGTGCTGCCCGGCGTCA
CGTCGATCGAATCGGCGCTGTCGCTGCGCGAGGTGAAACGCGAGGCCGAACTGCCGATTCCGTGA

Upstream 100 bases:

>100_bases
CCCCGCTCGACGAGCGCTTTTTGGCTAATTTGGCCGACCGATGCACCAAACTGATTGGAATACACTAATAGAAACCGATT
TCTTAGAGCTTTCCCACAAC

Downstream 100 bases:

>100_bases
ACGACGCCGCGAACGGCTCCGTCGCCGCATCCGCGGCTGCCCATGGCGCGGGTGGGCCGGCTGCGGCCGGCCCTGTGTCC
TCCGCGTCCTCCGCGTCCTC

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MIELDKTDRAILAAVQLDGRIPVARLADSVGLSETPCARRLKRLESDGYIERYRAQLSRNALGFGVVAFVLLRCSVHDRS
VANRFEREVLGIPRILSCHNVSGSADYLLQVVAHDLDDYGTFLRETLRVLPGVTSIESALSLREVKREAELPIP

Sequences:

>Translated_154_residues
MIELDKTDRAILAAVQLDGRIPVARLADSVGLSETPCARRLKRLESDGYIERYRAQLSRNALGFGVVAFVLLRCSVHDRS
VANRFEREVLGIPRILSCHNVSGSADYLLQVVAHDLDDYGTFLRETLRVLPGVTSIESALSLREVKREAELPIP
>Mature_154_residues
MIELDKTDRAILAAVQLDGRIPVARLADSVGLSETPCARRLKRLESDGYIERYRAQLSRNALGFGVVAFVLLRCSVHDRS
VANRFEREVLGIPRILSCHNVSGSADYLLQVVAHDLDDYGTFLRETLRVLPGVTSIESALSLREVKREAELPIP

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=35.3333333333333, Blast_Score=105, Evalue=1e-24,
Organism=Escherichia coli, GI1787116, Length=151, Percent_Identity=39.0728476821192, Blast_Score=99, Evalue=1e-22,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17129; Mature: 17129

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIELDKTDRAILAAVQLDGRIPVARLADSVGLSETPCARRLKRLESDGYIERYRAQLSRN
CCCCCCCCHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHC
ALGFGVVAFVLLRCSVHDRSVANRFEREVLGIPRILSCHNVSGSADYLLQVVAHDLDDYG
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHH
TFLRETLRVLPGVTSIESALSLREVKREAELPIP
HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MIELDKTDRAILAAVQLDGRIPVARLADSVGLSETPCARRLKRLESDGYIERYRAQLSRN
CCCCCCCCHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHC
ALGFGVVAFVLLRCSVHDRSVANRFEREVLGIPRILSCHNVSGSADYLLQVVAHDLDDYG
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHH
TFLRETLRVLPGVTSIESALSLREVKREAELPIP
HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]