| Definition | Burkholderia mallei NCTC 10247 chromosome II, complete genome. |
|---|---|
| Accession | NC_009079 |
| Length | 2,352,693 |
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The map label for this gene is 126445801
Identifier: 126445801
GI number: 126445801
Start: 184994
End: 186031
Strand: Reverse
Name: 126445801
Synonym: BMA10247_A0217
Alternate gene names: NA
Gene position: 186031-184994 (Counterclockwise)
Preceding gene: 126446827
Following gene: 126446977
Centisome position: 7.91
GC content: 73.7
Gene sequence:
>1038_bases GTGCAGAATGCGCCGGTCGATCACGTTCGGGAGCAGGCGATGGCGAATTTGGATATGGCGCTCGTGGTAGGCGCGGCAGG CGGAATCGGCGGCGAAATGGTTCGGGCGCTGCGCGGCGCGGGCTGGCGCGTGAGGGCGCTCGCGCGCTCGGCGCCGCCGG GCGACGGCGCGGCCGACATCGACTGGCGGCTCGGCGACGCGTCGAATCCGCACGACGTCGCCGAGGCCGCTCGCGGCTGC GCGGCAATCGTGCATGCGGTCAATCCGCCCGGCTATCGCCGCTGGAGCGAGTGGGTGCTGCCGATGCTGGAGAACACGAT CGCGGCCGCGAAACGCGAGCGCGCGACGATCGTGCTGCCCGGCACCGTCTACAACTACGGGCCGGATGCGGGCGGCCTGT TGCGCGAGGATTCGCCGCAACGCCCGCTGACCCGCAAGGGCGCGATCCGCGTGGAAATGGAGCGGCGCCTGCGCGATGCC ACGGAGGCCGGCGCGCGCGTGCTGATCGTGCGAGCGGGCGACTTCTTCGGCCCCGGCGCCCGCAACAACTGGTTCTCGCA GGGCCTCGTGAAGCCCGGCCGCCCCGTGCGGACCGTGCGCGCGCCCGGGCGCGCGGGCGTCGGCCACCAGTGGGCGTATC TCCCCGACGTCGCGCAGGCGATGGTCGAATTGCTCGCGCGCCGCGACGCGCTCGACGCGTTCTCGTGCTTTCATCTGGCC GGCCACTGGGACGCCGACGGCACGCGAATGAGCGCCGCGATCCGCGCCGCCGCGGCGCGGCGCTCGGGCGTCGAGCCGCG CGTCGCCGCCTTCCCGTGGTGGCTCGTCACGCTCGCGTCGCCGTTCGTCGAGACCTTGCGCGAAATGCGCGAGATGCGCT ATCTGTGGCGCGAAGCGGTGCGCCTGGACAATGCAAGGCTCGTCGCCGCGCTCGGCCGCGAGCCGCACACGCCGCTCGAA GCCGCGGTCGAGACGACGCTCGACGCGCTCGGCTGCCTGAACGGCCGCGCTTCGCGCGCCGCGCCGTCGGTGCGCTGA
Upstream 100 bases:
>100_bases GCCGAGGAACGAACGGTACAGCTCCCAACCGATTTCCGAGCCCATACGAAAATGTATAGCCACCAAACGAATTTCGGTAA TTTTAATCGAGCGGCGCGCG
Downstream 100 bases:
>100_bases CACCGCGGCCCCGGCGATGCCGGGCCGCTCGCGCGGGCCGGCCCCGCGGCTCGGTGCGCCCCGCGCTCATGCGGCGAGGC GTCGCTCGCGCGCCCACCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NAD-Dependent Epimerase/Dehydratase Family Protein; Nucleoside-Diphosphate-Sugar Epimerase; NAD Dependent Epimerase/Dehydratase Family Protein; Sugar Dehydratase/Epimerase; Epimerase; NmrA-Like Family; Nucleoside-Diphosphate-Sugar Epimerases; NmrA-Like Protein/Nucleoside-Diphosphate-Sugar Epimerase; NmrA Family Protein; Short-Chain Dehydrogenase/Reductase SDR; NAD Dependent Epimerase; NAD Dependent Epimerase/Dehydratase Family; 3-Beta Hydroxysteroid Dehydrogenase; Saccharopine Dehydrogenase
Number of amino acids: Translated: 345; Mature: 345
Protein sequence:
>345_residues MQNAPVDHVREQAMANLDMALVVGAAGGIGGEMVRALRGAGWRVRALARSAPPGDGAADIDWRLGDASNPHDVAEAARGC AAIVHAVNPPGYRRWSEWVLPMLENTIAAAKRERATIVLPGTVYNYGPDAGGLLREDSPQRPLTRKGAIRVEMERRLRDA TEAGARVLIVRAGDFFGPGARNNWFSQGLVKPGRPVRTVRAPGRAGVGHQWAYLPDVAQAMVELLARRDALDAFSCFHLA GHWDADGTRMSAAIRAAAARRSGVEPRVAAFPWWLVTLASPFVETLREMREMRYLWREAVRLDNARLVAALGREPHTPLE AAVETTLDALGCLNGRASRAAPSVR
Sequences:
>Translated_345_residues MQNAPVDHVREQAMANLDMALVVGAAGGIGGEMVRALRGAGWRVRALARSAPPGDGAADIDWRLGDASNPHDVAEAARGC AAIVHAVNPPGYRRWSEWVLPMLENTIAAAKRERATIVLPGTVYNYGPDAGGLLREDSPQRPLTRKGAIRVEMERRLRDA TEAGARVLIVRAGDFFGPGARNNWFSQGLVKPGRPVRTVRAPGRAGVGHQWAYLPDVAQAMVELLARRDALDAFSCFHLA GHWDADGTRMSAAIRAAAARRSGVEPRVAAFPWWLVTLASPFVETLREMREMRYLWREAVRLDNARLVAALGREPHTPLE AAVETTLDALGCLNGRASRAAPSVR >Mature_345_residues MQNAPVDHVREQAMANLDMALVVGAAGGIGGEMVRALRGAGWRVRALARSAPPGDGAADIDWRLGDASNPHDVAEAARGC AAIVHAVNPPGYRRWSEWVLPMLENTIAAAKRERATIVLPGTVYNYGPDAGGLLREDSPQRPLTRKGAIRVEMERRLRDA TEAGARVLIVRAGDFFGPGARNNWFSQGLVKPGRPVRTVRAPGRAGVGHQWAYLPDVAQAMVELLARRDALDAFSCFHLA GHWDADGTRMSAAIRAAAARRSGVEPRVAAFPWWLVTLASPFVETLREMREMRYLWREAVRLDNARLVAALGREPHTPLE AAVETTLDALGCLNGRASRAAPSVR
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37416; Mature: 37416
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNAPVDHVREQAMANLDMALVVGAAGGIGGEMVRALRGAGWRVRALARSAPPGDGAADI CCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCEEEHHHHCCCCCCCCCCC DWRLGDASNPHDVAEAARGCAAIVHAVNPPGYRRWSEWVLPMLENTIAAAKRERATIVLP EEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEC GTVYNYGPDAGGLLREDSPQRPLTRKGAIRVEMERRLRDATEAGARVLIVRAGDFFGPGA CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCEEEEEECCCCCCCCC RNNWFSQGLVKPGRPVRTVRAPGRAGVGHQWAYLPDVAQAMVELLARRDALDAFSCFHLA CCCHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC GHWDADGTRMSAAIRAAAARRSGVEPRVAAFPWWLVTLASPFVETLREMREMRYLWREAV CCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLDNARLVAALGREPHTPLEAAVETTLDALGCLNGRASRAAPSVR HCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MQNAPVDHVREQAMANLDMALVVGAAGGIGGEMVRALRGAGWRVRALARSAPPGDGAADI CCCCCHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHCCCCEEEHHHHCCCCCCCCCCC DWRLGDASNPHDVAEAARGCAAIVHAVNPPGYRRWSEWVLPMLENTIAAAKRERATIVLP EEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEC GTVYNYGPDAGGLLREDSPQRPLTRKGAIRVEMERRLRDATEAGARVLIVRAGDFFGPGA CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCEEEEEECCCCCCCCC RNNWFSQGLVKPGRPVRTVRAPGRAGVGHQWAYLPDVAQAMVELLARRDALDAFSCFHLA CCCHHHCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC GHWDADGTRMSAAIRAAAARRSGVEPRVAAFPWWLVTLASPFVETLREMREMRYLWREAV CCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLDNARLVAALGREPHTPLEAAVETTLDALGCLNGRASRAAPSVR HCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA