Click here to switch to the map view.

The map label for this gene is oruR [H]

Identifier: 126446827

GI number: 126446827

Start: 186988

End: 188040

Strand: Reverse

Name: oruR [H]

Synonym: BMA10247_A0219

Alternate gene names: 126446827

Gene position: 188040-186988 (Counterclockwise)

Preceding gene: 126445761

Following gene: 126445801

Centisome position: 7.99

GC content: 72.93

Gene sequence:

>1053_bases
ATGACGCGGCGTTCGACGAAAGACAACCTGGGCCTGCGCCGGCCGACGATTCCGGTCGCGTACCTGCGGCATCTGCTGAC
GGTGTTCGAGGAGCGCGGCATCGACGCGCGCGACGCCCGCGCGGGCACCGGCCTGCGCGACGACGTGCTCGGCGAGCCGG
ACGCGCGCATCGCGCCGTCGCAATGGGGGCGGCTCGTGCTGAACGCGATCCGGCTGAGCGGCGACGAGGGCATCGGCTTC
GAGCTCGGGCTGCGGCTGCGGATGTCGGTGCACGGCTTTCTCGGCTACGCGGCGTTGACGGCCGCCGACCTGCGGGCGTC
GCTGCTCGTCAATGCGCGCTACTTCCGGATGCGCAACCGCCAATACCGGCTGCACTACGCGGAGCGTGACGACGGCGCGA
CGCTTTCGCTGCACGGCGTGCAGGCGAGCCCCGTGCTCCAGCATCATGCGATGTTCGAGATCGTGCTGACCGGGATCGCG
CAGAACGTCGGCACGGTGGCCGGGCGCGCCGATCCGCCGATCGAGCTGCAGTTCGCCTGGCCGGAACCCGACTACTACGC
GCGCTATCGCGACCGCCTGCCGCCCGTGCGCTTCGGCTGCGCGGCGAACGCGGTGTGGGTGTCGCGCGACGCGCTCGACT
GGCCGCTGCCGCTCGCGGACGACGTCGCGCACCGGCAGGCGCTCGCGCAGGTCGAGCGCGAATACGCGGACGTGCGCCAC
GAGGAGGGCGACCTCGTCGCGCGCGTGCGCGCCGAGCTCACGCTGACGGCACACGGCTATCCGGGGCCGGACGCGCTCGC
GCGGCGCCTGCTGATGTCGACGCGCACGCTGCGCCGGCGGCTGCTCGACGCGGGCTGCGGCTATCGCGCGCTCGTCGACG
AGGCGCGGCTGCGCGACGCGCGCCGGCTGCTGCGCGCGTCGGATCTCGATCTGAAGACGATCGCGGCGCGGCTGCAGTTC
AACGATCCGGCGAATTTCACGCGCGCGTTCCGCAAGTGGACGGGGCTCACGCCGAGCGCGTACCGGGAAGCGGGCGGCGG
CGACGAGCGATAG

Upstream 100 bases:

>100_bases
CGCGCGCACCGCTTGTCCGTGAGGGCGCAAATAGCCATAATGCTTGTCATTTGTGGCCAATCTTGGCCATTCCCAGCCAC
TTCGAAACCTCGGCGGCACG

Downstream 100 bases:

>100_bases
CCGGCGCGCGCTGCTCGTCGACATACGCGTCGAGCCCTTCGGCCAGCGCATCGAACGCCGCCCGGCAGCGCGGGCTCCCG
CGCAGGTCCTCGTGCATCGT

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 349

Protein sequence:

>350_residues
MTRRSTKDNLGLRRPTIPVAYLRHLLTVFEERGIDARDARAGTGLRDDVLGEPDARIAPSQWGRLVLNAIRLSGDEGIGF
ELGLRLRMSVHGFLGYAALTAADLRASLLVNARYFRMRNRQYRLHYAERDDGATLSLHGVQASPVLQHHAMFEIVLTGIA
QNVGTVAGRADPPIELQFAWPEPDYYARYRDRLPPVRFGCAANAVWVSRDALDWPLPLADDVAHRQALAQVEREYADVRH
EEGDLVARVRAELTLTAHGYPGPDALARRLLMSTRTLRRRLLDAGCGYRALVDEARLRDARRLLRASDLDLKTIAARLQF
NDPANFTRAFRKWTGLTPSAYREAGGGDER

Sequences:

>Translated_350_residues
MTRRSTKDNLGLRRPTIPVAYLRHLLTVFEERGIDARDARAGTGLRDDVLGEPDARIAPSQWGRLVLNAIRLSGDEGIGF
ELGLRLRMSVHGFLGYAALTAADLRASLLVNARYFRMRNRQYRLHYAERDDGATLSLHGVQASPVLQHHAMFEIVLTGIA
QNVGTVAGRADPPIELQFAWPEPDYYARYRDRLPPVRFGCAANAVWVSRDALDWPLPLADDVAHRQALAQVEREYADVRH
EEGDLVARVRAELTLTAHGYPGPDALARRLLMSTRTLRRRLLDAGCGYRALVDEARLRDARRLLRASDLDLKTIAARLQF
NDPANFTRAFRKWTGLTPSAYREAGGGDER
>Mature_349_residues
TRRSTKDNLGLRRPTIPVAYLRHLLTVFEERGIDARDARAGTGLRDDVLGEPDARIAPSQWGRLVLNAIRLSGDEGIGFE
LGLRLRMSVHGFLGYAALTAADLRASLLVNARYFRMRNRQYRLHYAERDDGATLSLHGVQASPVLQHHAMFEIVLTGIAQ
NVGTVAGRADPPIELQFAWPEPDYYARYRDRLPPVRFGCAANAVWVSRDALDWPLPLADDVAHRQALAQVEREYADVRHE
EGDLVARVRAELTLTAHGYPGPDALARRLLMSTRTLRRRLLDAGCGYRALVDEARLRDARRLLRASDLDLKTIAARLQFN
DPANFTRAFRKWTGLTPSAYREAGGGDER

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 39297; Mature: 39166

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRRSTKDNLGLRRPTIPVAYLRHLLTVFEERGIDARDARAGTGLRDDVLGEPDARIAPS
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCHH
QWGRLVLNAIRLSGDEGIGFELGLRLRMSVHGFLGYAALTAADLRASLLVNARYFRMRNR
HHHHHHHHHHHHCCCCCCCCEECEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QYRLHYAERDDGATLSLHGVQASPVLQHHAMFEIVLTGIAQNVGTVAGRADPPIELQFAW
EEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC
PEPDYYARYRDRLPPVRFGCAANAVWVSRDALDWPLPLADDVAHRQALAQVEREYADVRH
CCCHHHHHHHHCCCCEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
EEGDLVARVRAELTLTAHGYPGPDALARRLLMSTRTLRRRLLDAGCGYRALVDEARLRDA
CCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
RRLLRASDLDLKTIAARLQFNDPANFTRAFRKWTGLTPSAYREAGGGDER
HHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCC
>Mature Secondary Structure 
TRRSTKDNLGLRRPTIPVAYLRHLLTVFEERGIDARDARAGTGLRDDVLGEPDARIAPS
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCHH
QWGRLVLNAIRLSGDEGIGFELGLRLRMSVHGFLGYAALTAADLRASLLVNARYFRMRNR
HHHHHHHHHHHHCCCCCCCCEECEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
QYRLHYAERDDGATLSLHGVQASPVLQHHAMFEIVLTGIAQNVGTVAGRADPPIELQFAW
EEEEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEC
PEPDYYARYRDRLPPVRFGCAANAVWVSRDALDWPLPLADDVAHRQALAQVEREYADVRH
CCCHHHHHHHHCCCCEEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
EEGDLVARVRAELTLTAHGYPGPDALARRLLMSTRTLRRRLLDAGCGYRALVDEARLRDA
CCCCCEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
RRLLRASDLDLKTIAARLQFNDPANFTRAFRKWTGLTPSAYREAGGGDER
HHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]