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The map label for this gene is ywcH [H]

Identifier: 126443369

GI number: 126443369

Start: 1609589

End: 1610536

Strand: Reverse

Name: ywcH [H]

Synonym: BURPS668_A1671

Alternate gene names: 126443369

Gene position: 1610536-1609589 (Counterclockwise)

Preceding gene: 126442481

Following gene: 126444233

Centisome position: 51.5

GC content: 74.05

Gene sequence:

>948_bases
GTGACGAAGTCGACGATCGTTCGTTCGCGGCCGGCGCAGTCGGTCCTGGATTTCGGAATCGTGGCGCCCGGCCGCGCCGG
CCCCGCCGTGCTCGCGGACAGCCTCGAGCTCGCCGGCCGGCTCGATCGGCTCGGCTATCACCGGCTCTGGCTGTCCGAGC
ATCACGAATCCCATTTCTGCTGGGCGGTGCCGGAAGTGATGGTCGCGGCGCTCGCGCAGCGCACGCGCGCGCTGCGCATC
GGCACGGCGGCCGTGCTGCTGCCGGTGCGCAATCCGTTGCTGCTCGCGGAGAGCTTTCGCGTGCTCGAGGCGCTCACGCC
CGGGCGCATCGATCTCGGCGTGTGCGCGGCGGTGCCGCTCGACCCCGTCGCGCTGGCCGCGCTCGCCGAGCGGCCGGAGC
CGGACGTCGCCGCGCTGATGGCGAGCTTCGACGGGCGGCTCGGCGTGCTGCTCGACTATCTGCGCGGGCGCTTTCCCGAC
GGGCACCGCTTCGCGTGCGGCGCGACGCCGCCGTTCGTCGACGCGCCGCCCGTATGGGTGATGGGCTCGGGCCCGGGCAG
CGCGGCGACGGCCGCGGCACGCGGCGCGCACTACGCGTACTCGCTGTTCCACAAGGGCAGCCGGCGGGACCCGGCGGTGC
CGGCCGCCTATCGCGAGCGGCGCCCGGACGGCCGCGTCGCGCTGGCCGTGAGCTGCATCAGCGCGGACACGGCCGCCGCC
GCGGCCGCGCAGCGCCGGCTCGTCGAAGGCTGGTTGCGCGACGACATGCGCGTCGTGCTCAGCGGCACCCACGACGATTG
CCGCGAGCAGGTGCTCGCGCTCGCGCAGCGGTTCCGCGCGGACGAAGTCATCCTGCTGCATTTGTGGCACGACCCCGCGC
GCCGTGTCGACGCGATCGAGGCGATGGCGTCGCTGATTCATCCGTTAGCCGAACCGGTGCGCGCATGA

Upstream 100 bases:

>100_bases
CGATCGACCCCGACCCGTCGCGCGATGCCGGCGGCGCATGCGCGTGGCCCGACGGCGAGCCCTCTGCCCATTCCGCAACC
GCACCGTAGGAGATGCCGAA

Downstream 100 bases:

>100_bases
CGGCGATCGTTCCCGCCGCCGCGGCGGCAGCGACGATGGTCGACATCGTGCGCGCGCGCGCCGACCGGCAGCCCGATCGG
CCCGCGTACACGTATCTGCC

Product: luciferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 314

Protein sequence:

>315_residues
MTKSTIVRSRPAQSVLDFGIVAPGRAGPAVLADSLELAGRLDRLGYHRLWLSEHHESHFCWAVPEVMVAALAQRTRALRI
GTAAVLLPVRNPLLLAESFRVLEALTPGRIDLGVCAAVPLDPVALAALAERPEPDVAALMASFDGRLGVLLDYLRGRFPD
GHRFACGATPPFVDAPPVWVMGSGPGSAATAAARGAHYAYSLFHKGSRRDPAVPAAYRERRPDGRVALAVSCISADTAAA
AAAQRRLVEGWLRDDMRVVLSGTHDDCREQVLALAQRFRADEVILLHLWHDPARRVDAIEAMASLIHPLAEPVRA

Sequences:

>Translated_315_residues
MTKSTIVRSRPAQSVLDFGIVAPGRAGPAVLADSLELAGRLDRLGYHRLWLSEHHESHFCWAVPEVMVAALAQRTRALRI
GTAAVLLPVRNPLLLAESFRVLEALTPGRIDLGVCAAVPLDPVALAALAERPEPDVAALMASFDGRLGVLLDYLRGRFPD
GHRFACGATPPFVDAPPVWVMGSGPGSAATAAARGAHYAYSLFHKGSRRDPAVPAAYRERRPDGRVALAVSCISADTAAA
AAAQRRLVEGWLRDDMRVVLSGTHDDCREQVLALAQRFRADEVILLHLWHDPARRVDAIEAMASLIHPLAEPVRA
>Mature_314_residues
TKSTIVRSRPAQSVLDFGIVAPGRAGPAVLADSLELAGRLDRLGYHRLWLSEHHESHFCWAVPEVMVAALAQRTRALRIG
TAAVLLPVRNPLLLAESFRVLEALTPGRIDLGVCAAVPLDPVALAALAERPEPDVAALMASFDGRLGVLLDYLRGRFPDG
HRFACGATPPFVDAPPVWVMGSGPGSAATAAARGAHYAYSLFHKGSRRDPAVPAAYRERRPDGRVALAVSCISADTAAAA
AAQRRLVEGWLRDDMRVVLSGTHDDCREQVLALAQRFRADEVILLHLWHDPARRVDAIEAMASLIHPLAEPVRA

Specific function: Unknown

COG id: COG2141

COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To bacterial alkanal monooxygenase alpha and beta chains [H]

Homologues:

Organism=Escherichia coli, GI1789551, Length=202, Percent_Identity=34.1584158415842, Blast_Score=101, Evalue=7e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR019949 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: NA

Molecular weight: Translated: 33958; Mature: 33826

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKSTIVRSRPAQSVLDFGIVAPGRAGPAVLADSLELAGRLDRLGYHRLWLSEHHESHFC
CCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
WAVPEVMVAALAQRTRALRIGTAAVLLPVRNPLLLAESFRVLEALTPGRIDLGVCAAVPL
EHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEECCCC
DPVALAALAERPEPDVAALMASFDGRLGVLLDYLRGRFPDGHRFACGATPPFVDAPPVWV
CHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCEEE
MGSGPGSAATAAARGAHYAYSLFHKGSRRDPAVPAAYRERRPDGRVALAVSCISADTAAA
EECCCCCHHHHHHHCHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCEEEEEEECCCHHHHH
AAAQRRLVEGWLRDDMRVVLSGTHDDCREQVLALAQRFRADEVILLHLWHDPARRVDAIE
HHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHH
AMASLIHPLAEPVRA
HHHHHHHHHHHHHCC
>Mature Secondary Structure 
TKSTIVRSRPAQSVLDFGIVAPGRAGPAVLADSLELAGRLDRLGYHRLWLSEHHESHFC
CCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
WAVPEVMVAALAQRTRALRIGTAAVLLPVRNPLLLAESFRVLEALTPGRIDLGVCAAVPL
EHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEEECCCC
DPVALAALAERPEPDVAALMASFDGRLGVLLDYLRGRFPDGHRFACGATPPFVDAPPVWV
CHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCEEE
MGSGPGSAATAAARGAHYAYSLFHKGSRRDPAVPAAYRERRPDGRVALAVSCISADTAAA
EECCCCCHHHHHHHCHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCEEEEEEECCCHHHHH
AAAQRRLVEGWLRDDMRVVLSGTHDDCREQVLALAQRFRADEVILLHLWHDPARRVDAIE
HHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHH
AMASLIHPLAEPVRA
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]