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The map label for this gene is dcyD [H]

Identifier: 126442481

GI number: 126442481

Start: 1610548

End: 1611612

Strand: Reverse

Name: dcyD [H]

Synonym: BURPS668_A1672

Alternate gene names: 126442481

Gene position: 1611612-1610548 (Counterclockwise)

Preceding gene: 126444869

Following gene: 126443369

Centisome position: 51.53

GC content: 73.8

Gene sequence:

>1065_bases
ATGAGCCGCACACGCCTGCTTTCCGAACTGGTTCCCGGGCTCGACACGCTCGTCAGGCCGCTCGATCTGCTCGCGCGGCC
CACGCCGGTGACCGAGGAGCCGGAGCTCGCGCGTCGCTGGGGGCAGGCCGGCCTGTGGATCAAGCGCGACGATCTCGCGA
ATCCGCTCTACGGCGGCAGCAAGGTCCGCACGCTCGAGTTCTTCCTCGGCCGCGCGCGCGCGCAACGCGCGGACGGTATC
GTCACGATGGGGCCCTATGGCAGTCATCAGTTGCTCGCGACCGCGGTGTTCGGCCGGCGGACCGGTTTTCTCACGCGCGG
CGTCGCGACGCCGCAGCCCGACGTGCCGGAGATCGCGCTGAACCGCCGGCTGCTGCCCGCGTACGGAATGGAGGTGATGC
GCTGCGCGAGCTTCGCCGCGGTGCCCGCCGCGCTGCTGCGCGCGCGGCTCAAGCCGCTCGGCGCCGGGCGGCCGTTCTGG
ATTCCGCCCGGCGCGAATCACCCGCTCGGCGTGATGGGCGTCGTCGAGGGCGCGCTCGAAGTCGCGCAGGCGATCCGCGC
GGGCAGCCTGCCGGTTCCGGACGACGTCGTCGTGCCCACCGGCACCTGCGCGACGGCGGCGGGCGTCTACCTGGGCTTCG
CGCTCGCCGGGCTCGACGTGCGGGTCGTCGCGGTGAGGATGGTGCCGATGATCGTCACCGGGCCGGCGAAGCTGCTGCGC
ATGGCCCGGCAGACCGAGCGGCTGCTGCGCCGCTACGGCCTGACGGCGCCCGCGCGCTGGGGCGATCTGCTGTGGACCAA
CGATCATGCGGGGCCGAGCTATGGGCGCGCCGGCCTCGTCGCCGAGCGCGCGCGCGCCGACGTCGCGCAATTCGGCGCGT
TCCGCACCGAGACCACCTACACCGCGAAGACGCTCGCGCTGCTCGCGGGCGGCGGCCTGCAGCGGCGGCGGGTGCTGTTC
TGGAACACCTACAGCGCGATCGACCCCGACCCGTCGCGCGATGCCGGCGGCGCATGCGCGTGGCCCGACGGCGAGCCCTC
TGCCCATTCCGCAACCGCACCGTAG

Upstream 100 bases:

>100_bases
CGCGCGTCGCGGACATGCTCGGCACGCGGCCCGCGGCCGGCGCGCTCGCGGCCGAATTGACACGGCTCGGCCTCGGCGCC
GCGCCGCCGGGAGGACATCG

Downstream 100 bases:

>100_bases
GAGATGCCGAAGTGACGAAGTCGACGATCGTTCGTTCGCGGCCGGCGCAGTCGGTCCTGGATTTCGGAATCGTGGCGCCC
GGCCGCGCCGGCCCCGCCGT

Product: 1-aminocyclopropane-1-carboxylate deaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 353

Protein sequence:

>354_residues
MSRTRLLSELVPGLDTLVRPLDLLARPTPVTEEPELARRWGQAGLWIKRDDLANPLYGGSKVRTLEFFLGRARAQRADGI
VTMGPYGSHQLLATAVFGRRTGFLTRGVATPQPDVPEIALNRRLLPAYGMEVMRCASFAAVPAALLRARLKPLGAGRPFW
IPPGANHPLGVMGVVEGALEVAQAIRAGSLPVPDDVVVPTGTCATAAGVYLGFALAGLDVRVVAVRMVPMIVTGPAKLLR
MARQTERLLRRYGLTAPARWGDLLWTNDHAGPSYGRAGLVAERARADVAQFGAFRTETTYTAKTLALLAGGGLQRRRVLF
WNTYSAIDPDPSRDAGGACAWPDGEPSAHSATAP

Sequences:

>Translated_354_residues
MSRTRLLSELVPGLDTLVRPLDLLARPTPVTEEPELARRWGQAGLWIKRDDLANPLYGGSKVRTLEFFLGRARAQRADGI
VTMGPYGSHQLLATAVFGRRTGFLTRGVATPQPDVPEIALNRRLLPAYGMEVMRCASFAAVPAALLRARLKPLGAGRPFW
IPPGANHPLGVMGVVEGALEVAQAIRAGSLPVPDDVVVPTGTCATAAGVYLGFALAGLDVRVVAVRMVPMIVTGPAKLLR
MARQTERLLRRYGLTAPARWGDLLWTNDHAGPSYGRAGLVAERARADVAQFGAFRTETTYTAKTLALLAGGGLQRRRVLF
WNTYSAIDPDPSRDAGGACAWPDGEPSAHSATAP
>Mature_353_residues
SRTRLLSELVPGLDTLVRPLDLLARPTPVTEEPELARRWGQAGLWIKRDDLANPLYGGSKVRTLEFFLGRARAQRADGIV
TMGPYGSHQLLATAVFGRRTGFLTRGVATPQPDVPEIALNRRLLPAYGMEVMRCASFAAVPAALLRARLKPLGAGRPFWI
PPGANHPLGVMGVVEGALEVAQAIRAGSLPVPDDVVVPTGTCATAAGVYLGFALAGLDVRVVAVRMVPMIVTGPAKLLRM
ARQTERLLRRYGLTAPARWGDLLWTNDHAGPSYGRAGLVAERARADVAQFGAFRTETTYTAKTLALLAGGGLQRRRVLFW
NTYSAIDPDPSRDAGGACAWPDGEPSAHSATAP

Specific function: Catalyzes the alpha,beta-elimination reaction of D- cysteine and of several D-cysteine derivatives. It could be a defense mechanism against D-cysteine [H]

COG id: COG2515

COG function: function code E; 1-aminocyclopropane-1-carboxylate deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ACC deaminase/D-cysteine desulfhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082000, Length=314, Percent_Identity=28.9808917197452, Blast_Score=96, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005966
- InterPro:   IPR001926 [H]

Pfam domain/function: PF00291 PALP [H]

EC number: =4.4.1.15 [H]

Molecular weight: Translated: 37912; Mature: 37781

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRTRLLSELVPGLDTLVRPLDLLARPTPVTEEPELARRWGQAGLWIKRDDLANPLYGGS
CCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCCC
KVRTLEFFLGRARAQRADGIVTMGPYGSHQLLATAVFGRRTGFLTRGVATPQPDVPEIAL
HHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCHHHH
NRRLLPAYGMEVMRCASFAAVPAALLRARLKPLGAGRPFWIPPGANHPLGVMGVVEGALE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCHHHHHHHHHHH
VAQAIRAGSLPVPDDVVVPTGTCATAAGVYLGFALAGLDVRVVAVRMVPMIVTGPAKLLR
HHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHH
MARQTERLLRRYGLTAPARWGDLLWTNDHAGPSYGRAGLVAERARADVAQFGAFRTETTY
HHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHH
TAKTLALLAGGGLQRRRVLFWNTYSAIDPDPSRDAGGACAWPDGEPSAHSATAP
HHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SRTRLLSELVPGLDTLVRPLDLLARPTPVTEEPELARRWGQAGLWIKRDDLANPLYGGS
CHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCCCC
KVRTLEFFLGRARAQRADGIVTMGPYGSHQLLATAVFGRRTGFLTRGVATPQPDVPEIAL
HHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHCCCEECCCCCCCCCCCHHHH
NRRLLPAYGMEVMRCASFAAVPAALLRARLKPLGAGRPFWIPPGANHPLGVMGVVEGALE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCHHHHHHHHHHH
VAQAIRAGSLPVPDDVVVPTGTCATAAGVYLGFALAGLDVRVVAVRMVPMIVTGPAKLLR
HHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHH
MARQTERLLRRYGLTAPARWGDLLWTNDHAGPSYGRAGLVAERARADVAQFGAFRTETTY
HHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHH
TAKTLALLAGGGLQRRRVLFWNTYSAIDPDPSRDAGGACAWPDGEPSAHSATAP
HHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA