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The map label for this gene is yvdC [H]

Identifier: 126209418

GI number: 126209418

Start: 2194123

End: 2194446

Strand: Direct

Name: yvdC [H]

Synonym: APL_1964

Alternate gene names: 126209418

Gene position: 2194123-2194446 (Clockwise)

Preceding gene: 126209416

Following gene: 126209424

Centisome position: 96.47

GC content: 40.74

Gene sequence:

>324_bases
ATGCAGATTCAAGATTATCAAAATTGGGTCAGAGAGTTTTATCAGACACAGGGCTGGTATCGTTACAATCCGTTTATTCG
AGTGAACTTTTTAAGCGAAGAAGTCGGTGAAGTGGCGCGGGCGGTACGAGCGATTGAAATCGGTCGAGATCGTCCGGATG
AAACCGAAGCCTCTTGCCAAGAAAAAAGAGCGTGTTTGATCGAAGAACTGGGCGATGTGCTAGATAATTTGTTTATTTTG
GCGGATAAATACGATATTTCGATTGAAGAAGTGATTGAAAAGCATCAAGCAAAATTCATTAAGCGTTATGTAAAAGACGA
ATAA

Upstream 100 bases:

>100_bases
TTTCCTACGTTTGCGCCGCAATAAACGGTAATATTCATTGGCTTTCCTATTTTTTCCGATTAAACTGAAACTATTATGAC
AAGCCAAACAGGGAAATACA

Downstream 100 bases:

>100_bases
AAAAAGACCGAAGACCGCTTGTTAGCATTAACAAGCGGTCTGATTTCATTAACATTTAGCGAGTGCCATAAACGACAATG
GTTTTACCGTGTGCTGAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MQIQDYQNWVREFYQTQGWYRYNPFIRVNFLSEEVGEVARAVRAIEIGRDRPDETEASCQEKRACLIEELGDVLDNLFIL
ADKYDISIEEVIEKHQAKFIKRYVKDE

Sequences:

>Translated_107_residues
MQIQDYQNWVREFYQTQGWYRYNPFIRVNFLSEEVGEVARAVRAIEIGRDRPDETEASCQEKRACLIEELGDVLDNLFIL
ADKYDISIEEVIEKHQAKFIKRYVKDE
>Mature_107_residues
MQIQDYQNWVREFYQTQGWYRYNPFIRVNFLSEEVGEVARAVRAIEIGRDRPDETEASCQEKRACLIEELGDVLDNLFIL
ADKYDISIEEVIEKHQAKFIKRYVKDE

Specific function: Unknown

COG id: COG1694

COG function: function code R; Predicted pyrophosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011411
- InterPro:   IPR004518 [H]

Pfam domain/function: PF03819 MazG [H]

EC number: NA

Molecular weight: Translated: 12824; Mature: 12824

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIQDYQNWVREFYQTQGWYRYNPFIRVNFLSEEVGEVARAVRAIEIGRDRPDETEASCQ
CCCHHHHHHHHHHHHCCCEEEECCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
EKRACLIEELGDVLDNLFILADKYDISIEEVIEKHQAKFIKRYVKDE
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQIQDYQNWVREFYQTQGWYRYNPFIRVNFLSEEVGEVARAVRAIEIGRDRPDETEASCQ
CCCHHHHHHHHHHHHCCCEEEECCEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
EKRACLIEELGDVLDNLFILADKYDISIEEVIEKHQAKFIKRYVKDE
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]