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The map label for this gene is pgaD

Identifier: 126209384

GI number: 126209384

Start: 2161556

End: 2161840

Strand: Direct

Name: pgaD

Synonym: APL_1924

Alternate gene names: NA

Gene position: 2161556-2161840 (Clockwise)

Preceding gene: 126209383

Following gene: 126209386

Centisome position: 95.04

GC content: 35.79

Gene sequence:

>285_bases
ATGTCGGTGCAACAATTACAGAAATTAATGATTATTAACAAAACTAAACAACTCGGTTGGTGGATTCGTTTAAAAAGCTT
GTTTATCACTTTGCTGACTTGGGGCATTTGGTTAGTGATGGCATTTATGATTTGGCAATATCGAAACAGCCTTTTAGATT
CACCGGTCATTGATATTTATTATATCGGAGAGGTTATTCTGTTTATCTTTGCCGTGGTGTTTACTTTGATCTTTTTGACG
GTGTGTTGGTCGTATCTGGCTAAAAGTCGCCATAAAAAACCTTAA

Upstream 100 bases:

>100_bases
AGCCTAAATACGATTACTTTACTGTGCGGTATCCCAAAAGCGATTTTCCGAAATAAAACCAAACTAGCGGTATGGACCAG
TCCTGATAGAGGAGTTTAAT

Downstream 100 bases:

>100_bases
GACGACATACGAACCGATCAAATAGAAAAGCGGTTGAATTTGCAAAAAATCTTGTAAATTCAACCGCTTGTTTATTATTA
GTGATGACTGATTATATCAC

Product: biofilm PGA synthesis protein pgaD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 93

Protein sequence:

>94_residues
MSVQQLQKLMIINKTKQLGWWIRLKSLFITLLTWGIWLVMAFMIWQYRNSLLDSPVIDIYYIGEVILFIFAVVFTLIFLT
VCWSYLAKSRHKKP

Sequences:

>Translated_94_residues
MSVQQLQKLMIINKTKQLGWWIRLKSLFITLLTWGIWLVMAFMIWQYRNSLLDSPVIDIYYIGEVILFIFAVVFTLIFLT
VCWSYLAKSRHKKP
>Mature_93_residues
SVQQLQKLMIINKTKQLGWWIRLKSLFITLLTWGIWLVMAFMIWQYRNSLLDSPVIDIYYIGEVILFIFAVVFTLIFLTV
CWSYLAKSRHKKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11273; Mature: 11142

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVQQLQKLMIINKTKQLGWWIRLKSLFITLLTWGIWLVMAFMIWQYRNSLLDSPVIDIY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
YIGEVILFIFAVVFTLIFLTVCWSYLAKSRHKKP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SVQQLQKLMIINKTKQLGWWIRLKSLFITLLTWGIWLVMAFMIWQYRNSLLDSPVIDIY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
YIGEVILFIFAVVFTLIFLTVCWSYLAKSRHKKP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA