Click here to switch to the map view.

The map label for this gene is fucA [H]

Identifier: 126209151

GI number: 126209151

Start: 1917906

End: 1918556

Strand: Direct

Name: fucA [H]

Synonym: APL_1687

Alternate gene names: 126209151

Gene position: 1917906-1918556 (Clockwise)

Preceding gene: 126209150

Following gene: 126209152

Centisome position: 84.32

GC content: 44.7

Gene sequence:

>651_bases
ATGAATCGCAGAGAACTAGCTCGACAAATCATCGATACTTGCCTTGAAATGACACGTCTCGGTTTAAACCAAGGGACGGC
AGGTAATGTTAGCGTACGTTATCAAGACGGTATGCTGATTACCCCGACTGGTACGCCGTACGAACAAATGACCGAAGACA
GTATCGTTTATGTGGATAAAGACGGTAAACACGAAGACGGTAAGTTACCGTCAAGCGAATGGCAATTCCATTTAGCCGTG
TATGAAGCACGTCCGGAATTAAATGCGGTCGTGCATAATCACGCATTGAATTGCGCCGCCGCTTCTATCCTCGGCGAAGA
TATTCCGGCTATTCACTATATGATTGCTTGTACCGGAACCGATCATATTCCATGCGTACCTTATGCGACTTTCGGCACAC
ACAAATTAGCCGATTATGTGCGTGAGGGAATCAAACAAAGTAAAGCGATTTTACTGGCGCATCACGGCTTAATTACCGCA
GATAAAACCTTGGATAAAGCGTTAGGTATCGCTCATGAGGTTGAAGTGATTGCCGAGTGGTATTTAAAACTGCTTGCAAC
AGGCAGACCGCTTCCGACGTTATCCAAAGAAGAGATGCAAACCGTATTGGAAAAATTCAAATCTTACGGTTCTTGGGTCG
AAGAAAAATAA

Upstream 100 bases:

>100_bases
CGAAATACGGCAACATCATCATCAAAAAAGGGGTTACGCCCGTTAAATAAAAATTTACACCATTAACAGAATTCATCATA
AAAAATTAAAGGAGTTCACT

Downstream 100 bases:

>100_bases
ATGTAATCGAGAAATGTAATGACATCTTCATAAACAACGAAAAAGGAACGTCCTATGACAGCTAAAGTTCTTGAGAAAAA
ATTTGTGGTGCCATTTATCC

Product: L-fuculose phosphate aldolase

Products: NA

Alternate protein names: L-fuculose-1-phosphate aldolase [H]

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MNRRELARQIIDTCLEMTRLGLNQGTAGNVSVRYQDGMLITPTGTPYEQMTEDSIVYVDKDGKHEDGKLPSSEWQFHLAV
YEARPELNAVVHNHALNCAAASILGEDIPAIHYMIACTGTDHIPCVPYATFGTHKLADYVREGIKQSKAILLAHHGLITA
DKTLDKALGIAHEVEVIAEWYLKLLATGRPLPTLSKEEMQTVLEKFKSYGSWVEEK

Sequences:

>Translated_216_residues
MNRRELARQIIDTCLEMTRLGLNQGTAGNVSVRYQDGMLITPTGTPYEQMTEDSIVYVDKDGKHEDGKLPSSEWQFHLAV
YEARPELNAVVHNHALNCAAASILGEDIPAIHYMIACTGTDHIPCVPYATFGTHKLADYVREGIKQSKAILLAHHGLITA
DKTLDKALGIAHEVEVIAEWYLKLLATGRPLPTLSKEEMQTVLEKFKSYGSWVEEK
>Mature_216_residues
MNRRELARQIIDTCLEMTRLGLNQGTAGNVSVRYQDGMLITPTGTPYEQMTEDSIVYVDKDGKHEDGKLPSSEWQFHLAV
YEARPELNAVVHNHALNCAAASILGEDIPAIHYMIACTGTDHIPCVPYATFGTHKLADYVREGIKQSKAILLAHHGLITA
DKTLDKALGIAHEVEVIAEWYLKLLATGRPLPTLSKEEMQTVLEKFKSYGSWVEEK

Specific function: Fucose metabolism; third step. [C]

COG id: COG0235

COG function: function code G; Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldolase class II family. AraD/FucA subfamily [H]

Homologues:

Organism=Escherichia coli, GI1789164, Length=215, Percent_Identity=66.5116279069767, Blast_Score=307, Evalue=3e-85,
Organism=Escherichia coli, GI1789094, Length=198, Percent_Identity=33.3333333333333, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI1790642, Length=125, Percent_Identity=35.2, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1786247, Length=225, Percent_Identity=28, Blast_Score=61, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001303
- InterPro:   IPR004782 [H]

Pfam domain/function: PF00596 Aldolase_II [H]

EC number: =4.1.2.17 [H]

Molecular weight: Translated: 24061; Mature: 24061

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRRELARQIIDTCLEMTRLGLNQGTAGNVSVRYQDGMLITPTGTPYEQMTEDSIVYVDK
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEECCCCCCHHHHCCCCEEEEEC
DGKHEDGKLPSSEWQFHLAVYEARPELNAVVHNHALNCAAASILGEDIPAIHYMIACTGT
CCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC
DHIPCVPYATFGTHKLADYVREGIKQSKAILLAHHGLITADKTLDKALGIAHEVEVIAEW
CCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCEECHHHHHHHHCHHHHHHHHHHH
YLKLLATGRPLPTLSKEEMQTVLEKFKSYGSWVEEK
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNRRELARQIIDTCLEMTRLGLNQGTAGNVSVRYQDGMLITPTGTPYEQMTEDSIVYVDK
CCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCEEECCCCCCHHHHCCCCEEEEEC
DGKHEDGKLPSSEWQFHLAVYEARPELNAVVHNHALNCAAASILGEDIPAIHYMIACTGT
CCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCC
DHIPCVPYATFGTHKLADYVREGIKQSKAILLAHHGLITADKTLDKALGIAHEVEVIAEW
CCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEECCCEECHHHHHHHHCHHHHHHHHHHH
YLKLLATGRPLPTLSKEEMQTVLEKFKSYGSWVEEK
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]