| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
Click here to switch to the map view.
The map label for this gene is 126209045
Identifier: 126209045
GI number: 126209045
Start: 1807932
End: 1808897
Strand: Reverse
Name: 126209045
Synonym: APL_1581
Alternate gene names: NA
Gene position: 1808897-1807932 (Counterclockwise)
Preceding gene: 126209050
Following gene: 126209044
Centisome position: 79.53
GC content: 29.61
Gene sequence:
>966_bases ATGTCTAGCATAATGACTCGTCCTATAATTAATCATGTAATGTCTAGAGATATTCAAAGTGGCATATTTAGTTCTATTTT AGAATATTTTACTGATTTTGGTTCCAATGAATTTCAACATATTGTCAGTGTATCTCCAATACCTGAAGCTAAAGTTTATC ACTATCACCGTCCACACCTAGAAGAAAAATTATTACCTAATTCTGTTTGTACAGTACATCATGACCTCAATGATCCAGAT CCTTGGCATGCTAAGTATAGATTTATTCCTAGATATATGGAAGCTGGGGCTATAATTTGTTTAAATTACACTCAAAAAGA AATTTTAATATCTCAGGGACTTCCGGAACATAAGTTATTTGTGATTCCTCACGGATATAATCAAAAAGTATTATTTCCTA AGAAAATTAAAGAAATATCAAGTACAGATAAAATTACCTTAGGAATTGCTTCACGGAGATATGGTAGAAGAGTAAAAGGA GATGCATATTTATTTGAATTAGCAAAAAGATTAAATCCAGACCATTTTAAATTTATTTTTGTTGGTAAAGATAGACAATA TAGTGCCTTAGAAATGCAAGATCTAGGATTTGAAGCTCAAGTATATGAAAGATTGCCATATAGAATGTTTCAAAGTTTTT ATAATAATATTGATGTACTACTTATGTGTAGTAGTCATGAAGGTGGACCTGCAAATATCCCCGAAGCATTAGCTACTGGG ACACCTATATTTTCATCTAACATAGGTATACCTAAGGATGTTGTTATTAATTATAAGAATGGGTTGATTCTAACCTTAGA TCCAGATATAGATGCTGAACAGATTAATTTTATTTGCCTTGAAAAACCAAATATATTTGAAAATATATTAGATTTTTCAC TAAAACAGTCTCCAAGTTTAGCAATTTCTTGGGAGAAATGTATTCAACAAAATATTTTAGTTTATAAAAAAATAATTAAG GGTTAA
Upstream 100 bases:
>100_bases GTTGATAAATTTCTCATTTATATTTATGAAATTCCGATGAAAAATTTATCAACTATCTAGGGTAACTCCATAACGTATTC GTATTTCAGGAGTATTTTTA
Downstream 100 bases:
>100_bases TTATGTCCATTTCTATTCTAGTACCTGATTCTTTACACATTAACAAAAGAAACTTTAGTTCATTCTTCAGTTGGATTGAG AAAAATAAAATAAATATCCA
Product: putative glycosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MSSIMTRPIINHVMSRDIQSGIFSSILEYFTDFGSNEFQHIVSVSPIPEAKVYHYHRPHLEEKLLPNSVCTVHHDLNDPD PWHAKYRFIPRYMEAGAIICLNYTQKEILISQGLPEHKLFVIPHGYNQKVLFPKKIKEISSTDKITLGIASRRYGRRVKG DAYLFELAKRLNPDHFKFIFVGKDRQYSALEMQDLGFEAQVYERLPYRMFQSFYNNIDVLLMCSSHEGGPANIPEALATG TPIFSSNIGIPKDVVINYKNGLILTLDPDIDAEQINFICLEKPNIFENILDFSLKQSPSLAISWEKCIQQNILVYKKIIK G
Sequences:
>Translated_321_residues MSSIMTRPIINHVMSRDIQSGIFSSILEYFTDFGSNEFQHIVSVSPIPEAKVYHYHRPHLEEKLLPNSVCTVHHDLNDPD PWHAKYRFIPRYMEAGAIICLNYTQKEILISQGLPEHKLFVIPHGYNQKVLFPKKIKEISSTDKITLGIASRRYGRRVKG DAYLFELAKRLNPDHFKFIFVGKDRQYSALEMQDLGFEAQVYERLPYRMFQSFYNNIDVLLMCSSHEGGPANIPEALATG TPIFSSNIGIPKDVVINYKNGLILTLDPDIDAEQINFICLEKPNIFENILDFSLKQSPSLAISWEKCIQQNILVYKKIIK G >Mature_320_residues SSIMTRPIINHVMSRDIQSGIFSSILEYFTDFGSNEFQHIVSVSPIPEAKVYHYHRPHLEEKLLPNSVCTVHHDLNDPDP WHAKYRFIPRYMEAGAIICLNYTQKEILISQGLPEHKLFVIPHGYNQKVLFPKKIKEISSTDKITLGIASRRYGRRVKGD AYLFELAKRLNPDHFKFIFVGKDRQYSALEMQDLGFEAQVYERLPYRMFQSFYNNIDVLLMCSSHEGGPANIPEALATGT PIFSSNIGIPKDVVINYKNGLILTLDPDIDAEQINFICLEKPNIFENILDFSLKQSPSLAISWEKCIQQNILVYKKIIKG
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36897; Mature: 36766
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSIMTRPIINHVMSRDIQSGIFSSILEYFTDFGSNEFQHIVSVSPIPEAKVYHYHRPHL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEECCCCCCCCEEECCCCCH EEKLLPNSVCTVHHDLNDPDPWHAKYRFIPRYMEAGAIICLNYTQKEILISQGLPEHKLF HHHCCCCCEEEEECCCCCCCCCCHHHEECHHHHCCCEEEEEECCHHHHHHHCCCCCCEEE VIPHGYNQKVLFPKKIKEISSTDKITLGIASRRYGRRVKGDAYLFELAKRLNPDHFKFIF EEECCCCCCEECHHHHHHCCCCCEEEEEEHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEE VGKDRQYSALEMQDLGFEAQVYERLPYRMFQSFYNNIDVLLMCSSHEGGPANIPEALATG EECCCCCCEEHHHHCCCHHHHHHHCHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHCC TPIFSSNIGIPKDVVINYKNGLILTLDPDIDAEQINFICLEKPNIFENILDFSLKQSPSL CCEEECCCCCCCEEEEEECCCEEEEECCCCCHHHEEEEEECCCHHHHHHHHHHHCCCCCE AISWEKCIQQNILVYKKIIKG EEEHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SSIMTRPIINHVMSRDIQSGIFSSILEYFTDFGSNEFQHIVSVSPIPEAKVYHYHRPHL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEECCCCCCCCEEECCCCCH EEKLLPNSVCTVHHDLNDPDPWHAKYRFIPRYMEAGAIICLNYTQKEILISQGLPEHKLF HHHCCCCCEEEEECCCCCCCCCCHHHEECHHHHCCCEEEEEECCHHHHHHHCCCCCCEEE VIPHGYNQKVLFPKKIKEISSTDKITLGIASRRYGRRVKGDAYLFELAKRLNPDHFKFIF EEECCCCCCEECHHHHHHCCCCCEEEEEEHHHHHCCCCCCHHHHHHHHHHCCCCCEEEEE VGKDRQYSALEMQDLGFEAQVYERLPYRMFQSFYNNIDVLLMCSSHEGGPANIPEALATG EECCCCCCEEHHHHCCCHHHHHHHCHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHCC TPIFSSNIGIPKDVVINYKNGLILTLDPDIDAEQINFICLEKPNIFENILDFSLKQSPSL CCEEECCCCCCCEEEEEECCCEEEEECCCCCHHHEEEEEECCCHHHHHHHHHHHCCCCCE AISWEKCIQQNILVYKKIIKG EEEHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA