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The map label for this gene is cps5B

Identifier: 126209044

GI number: 126209044

Start: 1806349

End: 1807929

Strand: Reverse

Name: cps5B

Synonym: APL_1580

Alternate gene names: NA

Gene position: 1807929-1806349 (Counterclockwise)

Preceding gene: 126209045

Following gene: 126209043

Centisome position: 79.49

GC content: 27.01

Gene sequence:

>1581_bases
ATGTCCATTTCTATTCTAGTACCTGATTCTTTACACATTAACAAAAGAAACTTTAGTTCATTCTTCAGTTGGATTGAGAA
AAATAAAATAAATATCCATTTTGAAAATAATAATAAAGATTGGATTTCATTATATGGTGTTTACGATTCAAAATTGGGTA
TTCTATATGAGAAAATAGATATTCTTACTAAGATTGAAGAAGAGGAATTATTTGCTTTTTGTGTTTATGATCTAAATATT
TTCAATATTTGTAGAGCTGAATTATTATCTTTAGTAGCCACAAGACCCGAATGGTATAATGAAGATTATCCTAATAACTT
AAGAGAAATATACAAAAAACTCTATACTAATAATCGAAGTGAATTATTGCAAAACATGGCTGCTGCTTGGTATTGGGTTG
ATTTCTGGAAAAAACGCCTATCTGAGTTAAAACAATTCTCTCATTGTTGTGTATTTTCAGGAGGTTTAATTTATCAAAAA
TCTTTGATTGAGTTATTAAAATATACTCCAACTAAAGTTATGGTTATGGAAAGCCTATTTACAGGAAACGAATATTATTG
TGAGGAACGTTATTCATCAATTGCTAATAATAGCGATATTAAACATTTAGCTATTTTTAACTCTTATAAAAAAACATTTA
GTTCAAAAAGTGAATATGATAAGGAACGAATGAAAGCTATTAATAAGTTCCTATTAATGAAAAATAAGAATGTCCAACAA
CCTACTGATTCTGAAATATTAGTATTTAAACAACAAAAACCAATAATTACTATTATTGGACAAGTGATAAATGATTTTTC
AGTCCTAGAATATAAAGGGAGAGGACTATCAACAATTAAAATCTATAAAGAACTTATATCTAAACTATCAGAGAATGGAT
TTAATGTAGTATTAAAAACTCACCCTTGGGAAGAGAAAAAAAATAATATCCGTACATCTTTAACTAAAAATATAATAGAA
GAATTTCTAAAAAATCTAACTGAGAATCAACAAGAATGTATAAAAATAGTTGATCACTATTCAATAAAGAAATTATTTAA
ACAATCTGATTTTATTATTAGTTTAAATTCTCAAGGGCTCCTTGAAGCTGCATTTGATGGTATAAAACCTATACAGTTAG
GTAATGCTTTTTATGGAAAAAAAGGATTCACGTACGATTATGACTTTTTAGATATTGATCAATTGGTAAATGACTTAGTA
GTAAATAAACTTACTCCAACACTATCTTTAGAAGAGTTTGATTTGTTCGAAGAGTTCATTACTATATTATTACAAAAGCA
TGCTGTTTCTATTCACGCCTCTGGCGTAAGTGTTTTATCTAGAAAATTTAATTTACCTACTATTATACCATTAGTAGAAA
ATGTCCCTAAGGAGAAGTCTAAAACAACATTACCTACTCAAAAAGATGTGGTAAAAAAGGAAAATACAACAATTGTTAAT
ATGGTTGAGTTACCTAAAGTAGTTCCACAAAGTGATAAGAATAGGAAATATCAAAAATTTAGAAACAATCCTCGACAATT
CTTTGCAGATTCTAGGAATCCAGTTATTAGAAGTTTAATGTATTTTTTCCCTTATAAATAA

Upstream 100 bases:

>100_bases
TAGATTTTTCACTAAAACAGTCTCCAAGTTTAGCAATTTCTTGGGAGAAATGTATTCAACAAAATATTTTAGTTTATAAA
AAAATAATTAAGGGTTAATT

Downstream 100 bases:

>100_bases
TATAGGTCTAATTTATGTTAAAAAAATATCAGCCTTTTGATTTAAGAAAAATAAATGAAGGCCACTCTAGTAATGCTAAG
TTAGTTTTACATTCTGAGGC

Product: region 2 capsular polysaccharide biosynthesis protein

Products: NA

Alternate protein names: Capsular Polysaccharide Biosynthesis Protein

Number of amino acids: Translated: 526; Mature: 525

Protein sequence:

>526_residues
MSISILVPDSLHINKRNFSSFFSWIEKNKINIHFENNNKDWISLYGVYDSKLGILYEKIDILTKIEEEELFAFCVYDLNI
FNICRAELLSLVATRPEWYNEDYPNNLREIYKKLYTNNRSELLQNMAAAWYWVDFWKKRLSELKQFSHCCVFSGGLIYQK
SLIELLKYTPTKVMVMESLFTGNEYYCEERYSSIANNSDIKHLAIFNSYKKTFSSKSEYDKERMKAINKFLLMKNKNVQQ
PTDSEILVFKQQKPIITIIGQVINDFSVLEYKGRGLSTIKIYKELISKLSENGFNVVLKTHPWEEKKNNIRTSLTKNIIE
EFLKNLTENQQECIKIVDHYSIKKLFKQSDFIISLNSQGLLEAAFDGIKPIQLGNAFYGKKGFTYDYDFLDIDQLVNDLV
VNKLTPTLSLEEFDLFEEFITILLQKHAVSIHASGVSVLSRKFNLPTIIPLVENVPKEKSKTTLPTQKDVVKKENTTIVN
MVELPKVVPQSDKNRKYQKFRNNPRQFFADSRNPVIRSLMYFFPYK

Sequences:

>Translated_526_residues
MSISILVPDSLHINKRNFSSFFSWIEKNKINIHFENNNKDWISLYGVYDSKLGILYEKIDILTKIEEEELFAFCVYDLNI
FNICRAELLSLVATRPEWYNEDYPNNLREIYKKLYTNNRSELLQNMAAAWYWVDFWKKRLSELKQFSHCCVFSGGLIYQK
SLIELLKYTPTKVMVMESLFTGNEYYCEERYSSIANNSDIKHLAIFNSYKKTFSSKSEYDKERMKAINKFLLMKNKNVQQ
PTDSEILVFKQQKPIITIIGQVINDFSVLEYKGRGLSTIKIYKELISKLSENGFNVVLKTHPWEEKKNNIRTSLTKNIIE
EFLKNLTENQQECIKIVDHYSIKKLFKQSDFIISLNSQGLLEAAFDGIKPIQLGNAFYGKKGFTYDYDFLDIDQLVNDLV
VNKLTPTLSLEEFDLFEEFITILLQKHAVSIHASGVSVLSRKFNLPTIIPLVENVPKEKSKTTLPTQKDVVKKENTTIVN
MVELPKVVPQSDKNRKYQKFRNNPRQFFADSRNPVIRSLMYFFPYK
>Mature_525_residues
SISILVPDSLHINKRNFSSFFSWIEKNKINIHFENNNKDWISLYGVYDSKLGILYEKIDILTKIEEEELFAFCVYDLNIF
NICRAELLSLVATRPEWYNEDYPNNLREIYKKLYTNNRSELLQNMAAAWYWVDFWKKRLSELKQFSHCCVFSGGLIYQKS
LIELLKYTPTKVMVMESLFTGNEYYCEERYSSIANNSDIKHLAIFNSYKKTFSSKSEYDKERMKAINKFLLMKNKNVQQP
TDSEILVFKQQKPIITIIGQVINDFSVLEYKGRGLSTIKIYKELISKLSENGFNVVLKTHPWEEKKNNIRTSLTKNIIEE
FLKNLTENQQECIKIVDHYSIKKLFKQSDFIISLNSQGLLEAAFDGIKPIQLGNAFYGKKGFTYDYDFLDIDQLVNDLVV
NKLTPTLSLEEFDLFEEFITILLQKHAVSIHASGVSVLSRKFNLPTIIPLVENVPKEKSKTTLPTQKDVVKKENTTIVNM
VELPKVVPQSDKNRKYQKFRNNPRQFFADSRNPVIRSLMYFFPYK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61680; Mature: 61549

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISILVPDSLHINKRNFSSFFSWIEKNKINIHFENNNKDWISLYGVYDSKLGILYEKID
CEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEECCCHHHHHHHHH
ILTKIEEEELFAFCVYDLNIFNICRAELLSLVATRPEWYNEDYPNNLREIYKKLYTNNRS
HHHHCCHHHEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHH
ELLQNMAAAWYWVDFWKKRLSELKQFSHCCVFSGGLIYQKSLIELLKYTPTKVMVMESLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHCCCHHHHHHHHHH
TGNEYYCEERYSSIANNSDIKHLAIFNSYKKTFSSKSEYDKERMKAINKFLLMKNKNVQQ
CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCC
PTDSEILVFKQQKPIITIIGQVINDFSVLEYKGRGLSTIKIYKELISKLSENGFNVVLKT
CCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEC
HPWEEKKNNIRTSLTKNIIEEFLKNLTENQQECIKIVDHYSIKKLFKQSDFIISLNSQGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCH
LEAAFDGIKPIQLGNAFYGKKGFTYDYDFLDIDQLVNDLVVNKLTPTLSLEEFDLFEEFI
HHHHHCCCCEEEECCCEECCCCCEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
TILLQKHAVSIHASGVSVLSRKFNLPTIIPLVENVPKEKSKTTLPTQKDVVKKENTTIVN
HHHHHHHHHEEECCHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCEEEE
MVELPKVVPQSDKNRKYQKFRNNPRQFFADSRNPVIRSLMYFFPYK
HHHHCCCCCCCCCCCHHHHHHCCCHHHHCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
SISILVPDSLHINKRNFSSFFSWIEKNKINIHFENNNKDWISLYGVYDSKLGILYEKID
EEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEEEEECCCHHHHHHHHH
ILTKIEEEELFAFCVYDLNIFNICRAELLSLVATRPEWYNEDYPNNLREIYKKLYTNNRS
HHHHCCHHHEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHH
ELLQNMAAAWYWVDFWKKRLSELKQFSHCCVFSGGLIYQKSLIELLKYTPTKVMVMESLF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHCCCHHHHHHHHHH
TGNEYYCEERYSSIANNSDIKHLAIFNSYKKTFSSKSEYDKERMKAINKFLLMKNKNVQQ
CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCC
PTDSEILVFKQQKPIITIIGQVINDFSVLEYKGRGLSTIKIYKELISKLSENGFNVVLKT
CCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEC
HPWEEKKNNIRTSLTKNIIEEFLKNLTENQQECIKIVDHYSIKKLFKQSDFIISLNSQGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCH
LEAAFDGIKPIQLGNAFYGKKGFTYDYDFLDIDQLVNDLVVNKLTPTLSLEEFDLFEEFI
HHHHHCCCCEEEECCCEECCCCCEECCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
TILLQKHAVSIHASGVSVLSRKFNLPTIIPLVENVPKEKSKTTLPTQKDVVKKENTTIVN
HHHHHHHHHEEECCHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHCCCCEEEE
MVELPKVVPQSDKNRKYQKFRNNPRQFFADSRNPVIRSLMYFFPYK
HHHHCCCCCCCCCCCHHHHHHCCCHHHHCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA