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The map label for this gene is cps5C

Identifier: 126209043

GI number: 126209043

Start: 1805186

End: 1806334

Strand: Reverse

Name: cps5C

Synonym: APL_1579

Alternate gene names: NA

Gene position: 1806334-1805186 (Counterclockwise)

Preceding gene: 126209044

Following gene: 126209042

Centisome position: 79.42

GC content: 28.11

Gene sequence:

>1149_bases
ATGTTAAAAAAATATCAGCCTTTTGATTTAAGAAAAATAAATGAAGGCCACTCTAGTAATGCTAAGTTAGTTTTACATTC
TGAGGCCTGTAATATAGATGCTAAAATCTCTAAGTTTTTCTGTTCACAAGATGACATTAATTTAGAAAACTTTATTGCAA
CATTTACTGATAACTATAAAGCACCAGAAGTATATACGGCGATTTTAAAGAATTGTTGTATTACACCTAGAGCACCTAAG
CTACCAAGATATTGGGGGATATTTTTTGAAGAAAATAATATTCCCTACTATGTATTTAATTTTTTAAGTTCTGAAGCTAA
AAAAAGATTCAATGATGCTAAATATTTTTACTTAGAAGATGATGATAGAATTTCCCTTGATTTAGAGAAAGTTAATAAAA
TTCATATTTCAGGGCTTAGTGTATGGTTTTATACTTTTCGTAATGTAGATCATTTTTTACGAGAATGTTTGCCTTCATTA
GTTACATTAAAACAGATGGGATATGACTTTAGTGCTTTGAACTTTATTTGTCCTGAAATATTACCTGATATTATTGATTT
TCTATGTGATTTTGGGATAGATAGAAGAAATATTATCAGCCTTGATTATCAATGGTTATCGTTTGATGAATTAATTATTC
CTTGTTTTAGTACGTTTGGACATCTGCATACACCAACAAAATATTATACTGAAATTACTAATTACCCTATTATTAACTCT
AAATCTAGAGAGGATATAAAAAGAATTTATGTATCTAGAGCGAATGCTAAAATGCGTAGAGTCATAAATGAAGATGTTAT
TGTTTCCGAACTGATTGCTAGGGGCTTTTCTATCATTGAACCTGGAAATTATTCTAAGCTGGAACAACGAGAGATTTTTT
CAAATGCGGAAGTAGTTATTGGTCCACATGGGATGGGAATAGCTAATAGTGTTTTTTCGAAAAATCTAAAAGCAATTTTA
GAAATAATGAATACTGACTATCACAGAATTAGTTATTTTAGAACTGCTCAATTAAAAGGTTGTTTATATGCTGCTTACTA
TGTAAATCCTTTACCATTAGATGCTTCATATAATAATAATTATGGAGATATAGTTATACATAAAACAAAATTTCTCAATT
TTTTAGATTCAATATTAAAAGAAATATAA

Upstream 100 bases:

>100_bases
AATTTAGAAACAATCCTCGACAATTCTTTGCAGATTCTAGGAATCCAGTTATTAGAAGTTTAATGTATTTTTTCCCTTAT
AAATAATATAGGTCTAATTT

Downstream 100 bases:

>100_bases
TTAAAGAACTTTAATTTTAGATTTACTTTACTAAGTGGAATTAAAATCATGACAATTTTAAATAAAATCGTAAAAGTTGG
CAATATTGAAGTGGCGAATG

Product: region 2 capsular polysaccharide biosynthesis protein

Products: NA

Alternate protein names: Capsular Polysaccharide Biosynthesis Protein; Capsular Polysaccharide Biosynthesis Protein- Like Protein; TPR Repeat-Containing Protein; Region 2 Capsular Polysaccharide Biosynthesis Protein

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MLKKYQPFDLRKINEGHSSNAKLVLHSEACNIDAKISKFFCSQDDINLENFIATFTDNYKAPEVYTAILKNCCITPRAPK
LPRYWGIFFEENNIPYYVFNFLSSEAKKRFNDAKYFYLEDDDRISLDLEKVNKIHISGLSVWFYTFRNVDHFLRECLPSL
VTLKQMGYDFSALNFICPEILPDIIDFLCDFGIDRRNIISLDYQWLSFDELIIPCFSTFGHLHTPTKYYTEITNYPIINS
KSREDIKRIYVSRANAKMRRVINEDVIVSELIARGFSIIEPGNYSKLEQREIFSNAEVVIGPHGMGIANSVFSKNLKAIL
EIMNTDYHRISYFRTAQLKGCLYAAYYVNPLPLDASYNNNYGDIVIHKTKFLNFLDSILKEI

Sequences:

>Translated_382_residues
MLKKYQPFDLRKINEGHSSNAKLVLHSEACNIDAKISKFFCSQDDINLENFIATFTDNYKAPEVYTAILKNCCITPRAPK
LPRYWGIFFEENNIPYYVFNFLSSEAKKRFNDAKYFYLEDDDRISLDLEKVNKIHISGLSVWFYTFRNVDHFLRECLPSL
VTLKQMGYDFSALNFICPEILPDIIDFLCDFGIDRRNIISLDYQWLSFDELIIPCFSTFGHLHTPTKYYTEITNYPIINS
KSREDIKRIYVSRANAKMRRVINEDVIVSELIARGFSIIEPGNYSKLEQREIFSNAEVVIGPHGMGIANSVFSKNLKAIL
EIMNTDYHRISYFRTAQLKGCLYAAYYVNPLPLDASYNNNYGDIVIHKTKFLNFLDSILKEI
>Mature_382_residues
MLKKYQPFDLRKINEGHSSNAKLVLHSEACNIDAKISKFFCSQDDINLENFIATFTDNYKAPEVYTAILKNCCITPRAPK
LPRYWGIFFEENNIPYYVFNFLSSEAKKRFNDAKYFYLEDDDRISLDLEKVNKIHISGLSVWFYTFRNVDHFLRECLPSL
VTLKQMGYDFSALNFICPEILPDIIDFLCDFGIDRRNIISLDYQWLSFDELIIPCFSTFGHLHTPTKYYTEITNYPIINS
KSREDIKRIYVSRANAKMRRVINEDVIVSELIARGFSIIEPGNYSKLEQREIFSNAEVVIGPHGMGIANSVFSKNLKAIL
EIMNTDYHRISYFRTAQLKGCLYAAYYVNPLPLDASYNNNYGDIVIHKTKFLNFLDSILKEI

Specific function: Unknown

COG id: COG4421

COG function: function code G; Capsular polysaccharide biosynthesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44503; Mature: 44503

Theoretical pI: Translated: 6.98; Mature: 6.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKYQPFDLRKINEGHSSNAKLVLHSEACNIDAKISKFFCSQDDINLENFIATFTDNYK
CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCC
APEVYTAILKNCCITPRAPKLPRYWGIFFEENNIPYYVFNFLSSEAKKRFNDAKYFYLED
CHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHCCCCEEEEEEC
DDRISLDLEKVNKIHISGLSVWFYTFRNVDHFLRECLPSLVTLKQMGYDFSALNFICPEI
CCEEEEEHHHCCEEEECHHEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LPDIIDFLCDFGIDRRNIISLDYQWLSFDELIIPCFSTFGHLHTPTKYYTEITNYPIINS
HHHHHHHHHHCCCCCCEEEEEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCC
KSREDIKRIYVSRANAKMRRVINEDVIVSELIARGFSIIEPGNYSKLEQREIFSNAEVVI
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHCCCCEEE
GPHGMGIANSVFSKNLKAILEIMNTDYHRISYFRTAQLKGCLYAAYYVNPLPLDASYNNN
CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCC
YGDIVIHKTKFLNFLDSILKEI
CCCEEEEHHHHHHHHHHHHHHC
>Mature Secondary Structure
MLKKYQPFDLRKINEGHSSNAKLVLHSEACNIDAKISKFFCSQDDINLENFIATFTDNYK
CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCHHHHHHHHCCCCC
APEVYTAILKNCCITPRAPKLPRYWGIFFEENNIPYYVFNFLSSEAKKRFNDAKYFYLED
CHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHCCCCEEEEEEC
DDRISLDLEKVNKIHISGLSVWFYTFRNVDHFLRECLPSLVTLKQMGYDFSALNFICPEI
CCEEEEEHHHCCEEEECHHEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LPDIIDFLCDFGIDRRNIISLDYQWLSFDELIIPCFSTFGHLHTPTKYYTEITNYPIINS
HHHHHHHHHHCCCCCCEEEEEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCC
KSREDIKRIYVSRANAKMRRVINEDVIVSELIARGFSIIEPGNYSKLEQREIFSNAEVVI
CCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHCCCCEEE
GPHGMGIANSVFSKNLKAILEIMNTDYHRISYFRTAQLKGCLYAAYYVNPLPLDASYNNN
CCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCC
YGDIVIHKTKFLNFLDSILKEI
CCCEEEEHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA