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The map label for this gene is ybjE [C]

Identifier: 126209036

GI number: 126209036

Start: 1799696

End: 1799944

Strand: Reverse

Name: ybjE [C]

Synonym: APL_1572

Alternate gene names: 126209036

Gene position: 1799944-1799696 (Counterclockwise)

Preceding gene: 126209037

Following gene: 126209035

Centisome position: 79.14

GC content: 39.76

Gene sequence:

>249_bases
ATGTACGGCAGCATTGCATTTTTTAACGAACTGTCTCGTGAAATTTTCTGTTTATTTGCCATCCCATTTTTTATGCGCTA
CTTTCCATCGACCGCTGTTGGACTCGGTGGCGCAACCGCATTAGATGCAACGTTGCCGATTATCCAAAAGTCAGGTAGTA
TTCAAGTTGTGCCATTAGCCATCAGCTTTGGCTTTATCATCAACTTAGTCGTGCCAATTTTATTAGCATTTTTTATTGGA
TTAACATAA

Upstream 100 bases:

>100_bases
TTGTGCTTGTGTATTAGATTTGTCGATAATTAAAACCTTTGCCTCTGGCTTTGGTTGGTACTCTCTTTCAAGCGTATTAG
TTTATGATGCCTGAGGACCA

Downstream 100 bases:

>100_bases
CAAATACGCTCAAGCGATCTGTTTTTGTGGAAATTTTACAAAAACAGACTGCTTATTGAATCTTACGCTAACGTAATTAG
ATCATAAAACCCTAACTAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MYGSIAFFNELSREIFCLFAIPFFMRYFPSTAVGLGGATALDATLPIIQKSGSIQVVPLAISFGFIINLVVPILLAFFIG
LT

Sequences:

>Translated_82_residues
MYGSIAFFNELSREIFCLFAIPFFMRYFPSTAVGLGGATALDATLPIIQKSGSIQVVPLAISFGFIINLVVPILLAFFIG
LT
>Mature_82_residues
MYGSIAFFNELSREIFCLFAIPFFMRYFPSTAVGLGGATALDATLPIIQKSGSIQVVPLAISFGFIINLVVPILLAFFIG
LT

Specific function: Unknown

COG id: COG2431

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ybjE [H]

Homologues:

Organism=Escherichia coli, GI87081795, Length=76, Percent_Identity=53.9473684210526, Blast_Score=86, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005642
- ProDom:   PD022789 [H]

Pfam domain/function: PF03956 DUF340 [H]

EC number: NA

Molecular weight: Translated: 8880; Mature: 8880

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYGSIAFFNELSREIFCLFAIPFFMRYFPSTAVGLGGATALDATLPIIQKSGSIQVVPLA
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHCCCCCEEEEEHH
ISFGFIINLVVPILLAFFIGLT
HHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYGSIAFFNELSREIFCLFAIPFFMRYFPSTAVGLGGATALDATLPIIQKSGSIQVVPLA
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHCCCCCEEEEEHH
ISFGFIINLVVPILLAFFIGLT
HHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]