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The map label for this gene is tonB1

Identifier: 126209035

GI number: 126209035

Start: 1798680

End: 1799420

Strand: Reverse

Name: tonB1

Synonym: APL_1571

Alternate gene names: NA

Gene position: 1799420-1798680 (Counterclockwise)

Preceding gene: 126209036

Following gene: 126209034

Centisome position: 79.11

GC content: 37.79

Gene sequence:

>741_bases
ATGAAAAGAAGTTTTTATCATTTTTTTATCATCTTGGCTGTAAGTCTGATCCATCTAGGAGTAGCATATTCAATCTCACG
ATTTTCCTGGGACAAAAATCTTGCTCTCTTTGGAGGACTAAAAAATTTACACATGATAGAAGTTAATTTAGGTGTTGAAG
AGTCCCTTACGGTAAATACACCCTTAAAACCTAAAATAGCAGAACCACCTGAAGAATTTTTAAATACTACAGTAAAAGAT
GTGACTCAGTCAAACTTAGCCCCCAAATTAGCAGTTCCTAAAAAAAAGCCTCCCTCAAAGGAAGTAAAAAAAGCGCCTGA
AAAGATCATGAAAAAACATGAGACAAAGAAAGATGTTTCTCCAACAAACAAAAGCAGTCGTACTCAGCAGCCGATCCAAC
AAGGAAATCCAAATGGTATAAATGGAAGCAAATCAACCTATGGAAATGCCAAAGTCGATGCCTCCCTTGGTGCTGGTTAT
GGCAATGCAATGCGAGGGCGTTGCTCTGATATTTCAGATGAATCTGATGATGTCGGTAGTGTGAAATTGAAAGTTACTAT
TGGAGCAAACGGCAAAGCAATCAATGTTGAAATTTTATCTTCTTCAGGCATCAAGCGCCTAGATAACCAAGCTAGCAGAA
TGGCAACAGGACATACGTATCAACCGGCAAAAATTAATGGGAATACTATTGTAGGCAGTGTAACTTTCAATATTCATTTT
AAATGTGGTGCAGCAGCCTAA

Upstream 100 bases:

>100_bases
TTACATAAAAAGTAAAAAACATTTGCAAATCTTACAATTTTCAATTTAAAATAAACGATAATGATTTTCATTAACTTAAG
ATGCAAGTAAAAATAGAGAT

Downstream 100 bases:

>100_bases
ATTATTTGAGGAAATTAATTTATGAATTTAACAGAACTTATCAAACAACAAGATATTGTACTCTCGGTATCTTTCTTCAT
ATTAGTTTTTATGAGTATTT

Product: periplasmic protein

Products: NA

Alternate protein names: Periplasmic Protein

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MKRSFYHFFIILAVSLIHLGVAYSISRFSWDKNLALFGGLKNLHMIEVNLGVEESLTVNTPLKPKIAEPPEEFLNTTVKD
VTQSNLAPKLAVPKKKPPSKEVKKAPEKIMKKHETKKDVSPTNKSSRTQQPIQQGNPNGINGSKSTYGNAKVDASLGAGY
GNAMRGRCSDISDESDDVGSVKLKVTIGANGKAINVEILSSSGIKRLDNQASRMATGHTYQPAKINGNTIVGSVTFNIHF
KCGAAA

Sequences:

>Translated_246_residues
MKRSFYHFFIILAVSLIHLGVAYSISRFSWDKNLALFGGLKNLHMIEVNLGVEESLTVNTPLKPKIAEPPEEFLNTTVKD
VTQSNLAPKLAVPKKKPPSKEVKKAPEKIMKKHETKKDVSPTNKSSRTQQPIQQGNPNGINGSKSTYGNAKVDASLGAGY
GNAMRGRCSDISDESDDVGSVKLKVTIGANGKAINVEILSSSGIKRLDNQASRMATGHTYQPAKINGNTIVGSVTFNIHF
KCGAAA
>Mature_246_residues
MKRSFYHFFIILAVSLIHLGVAYSISRFSWDKNLALFGGLKNLHMIEVNLGVEESLTVNTPLKPKIAEPPEEFLNTTVKD
VTQSNLAPKLAVPKKKPPSKEVKKAPEKIMKKHETKKDVSPTNKSSRTQQPIQQGNPNGINGSKSTYGNAKVDASLGAGY
GNAMRGRCSDISDESDDVGSVKLKVTIGANGKAINVEILSSSGIKRLDNQASRMATGHTYQPAKINGNTIVGSVTFNIHF
KCGAAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26549; Mature: 26549

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRSFYHFFIILAVSLIHLGVAYSISRFSWDKNLALFGGLKNLHMIEVNLGVEESLTVNT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCCCCEEECC
PLKPKIAEPPEEFLNTTVKDVTQSNLAPKLAVPKKKPPSKEVKKAPEKIMKKHETKKDVS
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
PTNKSSRTQQPIQQGNPNGINGSKSTYGNAKVDASLGAGYGNAMRGRCSDISDESDDVGS
CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCE
VKLKVTIGANGKAINVEILSSSGIKRLDNQASRMATGHTYQPAKINGNTIVGSVTFNIHF
EEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEECCCEEEEEEEEEEEE
KCGAAA
EECCCC
>Mature Secondary Structure
MKRSFYHFFIILAVSLIHLGVAYSISRFSWDKNLALFGGLKNLHMIEVNLGVEESLTVNT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCCCCEEECC
PLKPKIAEPPEEFLNTTVKDVTQSNLAPKLAVPKKKPPSKEVKKAPEKIMKKHETKKDVS
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC
PTNKSSRTQQPIQQGNPNGINGSKSTYGNAKVDASLGAGYGNAMRGRCSDISDESDDVGS
CCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCE
VKLKVTIGANGKAINVEILSSSGIKRLDNQASRMATGHTYQPAKINGNTIVGSVTFNIHF
EEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCEECCCEEEEEEEEEEEE
KCGAAA
EECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA