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The map label for this gene is exbB [H]

Identifier: 126209034

GI number: 126209034

Start: 1797990

End: 1798658

Strand: Reverse

Name: exbB [H]

Synonym: APL_1570

Alternate gene names: 126209034

Gene position: 1798658-1797990 (Counterclockwise)

Preceding gene: 126209035

Following gene: 126209033

Centisome position: 79.08

GC content: 31.84

Gene sequence:

>669_bases
ATGAATTTAACAGAACTTATCAAACAACAAGATATTGTACTCTCGGTATCTTTCTTCATATTAGTTTTTATGAGTATTTT
ATCTTGGAGTATTATTTTAATAAGATTAATTAAAATAATCGGAGTAAAGAAAAACAATCAGGTAACATTTAATCTTATTA
AATCTGATGAAAATATGAATCAAGCAAAGAAATACACTCAAAATAAGCGGTCTGATATTTCTGAAATTTTGCAAACCACT
TTTAAACAATGCGAACTTTATCAATTAAATGGGAAATATAATTTATCTCATCAACTTCCTTTTAAAGATTTTTTAACCTT
ACATTTACGAAATGCAATAACACAGTCCCTTCGTAAATATGATGGTGGTTTAGTTGCACTTGCTTCTATTGGTGCGGTTG
CACCGTTCATTGGGTTATTTGGAACGGTCTGGGGAATTTTTAATGCACTTATGGACATCAGTCAGCAAGGACAAGTCAGT
ATCGCAACTGTATCTGCACCTATAGGAGAAGCATTAGTTGCAACGGCAATGGGACTATTTGTCGCAATTCCGGCAGTACT
TGCTTATAACTTAATTGCTCGCCTTAACCGTAATCTTTCTCAAGATTTAGATCATTACGCAAACGAGTTATTTATCTATT
TATTACATCACTATGGAGAAAATAAATAA

Upstream 100 bases:

>100_bases
ACCGGCAAAAATTAATGGGAATACTATTGTAGGCAGTGTAACTTTCAATATTCATTTTAAATGTGGTGCAGCAGCCTAAA
TTATTTGAGGAAATTAATTT

Downstream 100 bases:

>100_bases
TGGCATTTGGAAGTTTTGATAAAAATGAAAATTCGGTAATGTCAGAAATTAATGTTACGCCATTAGTTGATGTAATGTTG
GTGTTATTAATTGTTTTTAT

Product: biopolymer transport ExbB protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MNLTELIKQQDIVLSVSFFILVFMSILSWSIILIRLIKIIGVKKNNQVTFNLIKSDENMNQAKKYTQNKRSDISEILQTT
FKQCELYQLNGKYNLSHQLPFKDFLTLHLRNAITQSLRKYDGGLVALASIGAVAPFIGLFGTVWGIFNALMDISQQGQVS
IATVSAPIGEALVATAMGLFVAIPAVLAYNLIARLNRNLSQDLDHYANELFIYLLHHYGENK

Sequences:

>Translated_222_residues
MNLTELIKQQDIVLSVSFFILVFMSILSWSIILIRLIKIIGVKKNNQVTFNLIKSDENMNQAKKYTQNKRSDISEILQTT
FKQCELYQLNGKYNLSHQLPFKDFLTLHLRNAITQSLRKYDGGLVALASIGAVAPFIGLFGTVWGIFNALMDISQQGQVS
IATVSAPIGEALVATAMGLFVAIPAVLAYNLIARLNRNLSQDLDHYANELFIYLLHHYGENK
>Mature_222_residues
MNLTELIKQQDIVLSVSFFILVFMSILSWSIILIRLIKIIGVKKNNQVTFNLIKSDENMNQAKKYTQNKRSDISEILQTT
FKQCELYQLNGKYNLSHQLPFKDFLTLHLRNAITQSLRKYDGGLVALASIGAVAPFIGLFGTVWGIFNALMDISQQGQVS
IATVSAPIGEALVATAMGLFVAIPAVLAYNLIARLNRNLSQDLDHYANELFIYLLHHYGENK

Specific function: Involved in the tonB-dependent energy-dependent transport of various receptor-bound substrates. Protects exbD from proteolytic degradation and functionally stabilizes tonB [H]

COG id: COG0811

COG function: function code U; Biopolymer transport proteins

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbB/tolQ family [H]

Homologues:

Organism=Escherichia coli, GI1789381, Length=187, Percent_Identity=32.0855614973262, Blast_Score=96, Evalue=1e-21,
Organism=Escherichia coli, GI1786958, Length=224, Percent_Identity=30.3571428571429, Blast_Score=96, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002898 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 24953; Mature: 24953

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLTELIKQQDIVLSVSFFILVFMSILSWSIILIRLIKIIGVKKNNQVTFNLIKSDENMN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHH
QAKKYTQNKRSDISEILQTTFKQCELYQLNGKYNLSHQLPFKDFLTLHLRNAITQSLRKY
HHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
DGGLVALASIGAVAPFIGLFGTVWGIFNALMDISQQGQVSIATVSAPIGEALVATAMGLF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHH
VAIPAVLAYNLIARLNRNLSQDLDHYANELFIYLLHHYGENK
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNLTELIKQQDIVLSVSFFILVFMSILSWSIILIRLIKIIGVKKNNQVTFNLIKSDENMN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHH
QAKKYTQNKRSDISEILQTTFKQCELYQLNGKYNLSHQLPFKDFLTLHLRNAITQSLRKY
HHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
DGGLVALASIGAVAPFIGLFGTVWGIFNALMDISQQGQVSIATVSAPIGEALVATAMGLF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHH
VAIPAVLAYNLIARLNRNLSQDLDHYANELFIYLLHHYGENK
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9140974 [H]