Click here to switch to the map view.

The map label for this gene is 126208943

Identifier: 126208943

GI number: 126208943

Start: 1694751

End: 1695266

Strand: Reverse

Name: 126208943

Synonym: APL_1479

Alternate gene names: NA

Gene position: 1695266-1694751 (Counterclockwise)

Preceding gene: 126208944

Following gene: 126208942

Centisome position: 74.53

GC content: 43.02

Gene sequence:

>516_bases
ATGCAGAACAAATACGCTATGCTTTCACGTTTCGGTAAAAACATTTTTTTCTACGGATTAATGTTTATCGTGCTAAGTAC
CGTGATTGATTGGTATCGTAAACCGAGTGCGCCGAACCAATTTGCGCAACAAGTTTTATATGATTTACAGCACCAGCCGA
AAATGATCGCCCAACTTAGTCACGACCGACCAATGTTACTGTACTTTTGGGGCAGTTGGTGTACCTATTGCAAATTCACT
TCGCCGGCAATTCAACAATTTGCCGATGAGAATGTTTCCGTTTTAAGCGTTGCACTTAAATCCGGTACGCCGCAAGATGT
CGTCGATTACCTCAAACAAGAAGATTACCGCTTCCCCGTTATCAATGATCCTGACGGCGTAATCTCCAAAAGCTGGGATA
TTCAAGTGACTCCGACGGTTCTCATCATTAAAGACGGCGAAATCGTTCAACATACAACAGGGCTTACGAGTTATTGGGGA
CTTAAAGTCCGCCTTTGGCTCAGTAACTTAACTTAA

Upstream 100 bases:

>100_bases
AAGAGCGAGAAAAATTAAAAAAACGCGTGATTATGCAATTAAGAATGTTAGCCAGAGGAGCGGCTTCTTATACTTATAGC
CACGACAAGGAACACCAATA

Downstream 100 bases:

>100_bases
TTCGAGCGGTCTGATTTGTAAATTTTTCTGCAAATCAGACCGCTTTAACATATATAAAGAGTACATTATGATAATTGATC
CGAATTACCAACAAGAAAGC

Product: thioredoxin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MQNKYAMLSRFGKNIFFYGLMFIVLSTVIDWYRKPSAPNQFAQQVLYDLQHQPKMIAQLSHDRPMLLYFWGSWCTYCKFT
SPAIQQFADENVSVLSVALKSGTPQDVVDYLKQEDYRFPVINDPDGVISKSWDIQVTPTVLIIKDGEIVQHTTGLTSYWG
LKVRLWLSNLT

Sequences:

>Translated_171_residues
MQNKYAMLSRFGKNIFFYGLMFIVLSTVIDWYRKPSAPNQFAQQVLYDLQHQPKMIAQLSHDRPMLLYFWGSWCTYCKFT
SPAIQQFADENVSVLSVALKSGTPQDVVDYLKQEDYRFPVINDPDGVISKSWDIQVTPTVLIIKDGEIVQHTTGLTSYWG
LKVRLWLSNLT
>Mature_171_residues
MQNKYAMLSRFGKNIFFYGLMFIVLSTVIDWYRKPSAPNQFAQQVLYDLQHQPKMIAQLSHDRPMLLYFWGSWCTYCKFT
SPAIQQFADENVSVLSVALKSGTPQDVVDYLKQEDYRFPVINDPDGVISKSWDIQVTPTVLIIKDGEIVQHTTGLTSYWG
LKVRLWLSNLT

Specific function: Unknown

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR005746
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR017937
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: NA

Molecular weight: Translated: 19796; Mature: 19796

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: PS00194 THIOREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNKYAMLSRFGKNIFFYGLMFIVLSTVIDWYRKPSAPNQFAQQVLYDLQHQPKMIAQLS
CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHC
HDRPMLLYFWGSWCTYCKFTSPAIQQFADENVSVLSVALKSGTPQDVVDYLKQEDYRFPV
CCCCEEEEEECCHHHHHCCCCHHHHHHHCCCHHEEEEEHHCCCHHHHHHHHHHCCCCCCC
INDPDGVISKSWDIQVTPTVLIIKDGEIVQHTTGLTSYWGLKVRLWLSNLT
CCCCCCCCCCCCCEEECCEEEEEECCCEEEHHCCCCHHCCEEEEEEEECCC
>Mature Secondary Structure
MQNKYAMLSRFGKNIFFYGLMFIVLSTVIDWYRKPSAPNQFAQQVLYDLQHQPKMIAQLS
CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHC
HDRPMLLYFWGSWCTYCKFTSPAIQQFADENVSVLSVALKSGTPQDVVDYLKQEDYRFPV
CCCCEEEEEECCHHHHHCCCCHHHHHHHCCCHHEEEEEHHCCCHHHHHHHHHHCCCCCCC
INDPDGVISKSWDIQVTPTVLIIKDGEIVQHTTGLTSYWGLKVRLWLSNLT
CCCCCCCCCCCCCEEECCEEEEEECCCEEEHHCCCCHHCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]