| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is yhcG [H]
Identifier: 126208924
GI number: 126208924
Start: 1673509
End: 1674525
Strand: Direct
Name: yhcG [H]
Synonym: APL_1460
Alternate gene names: 126208924
Gene position: 1673509-1674525 (Clockwise)
Preceding gene: 126208914
Following gene: 126208925
Centisome position: 73.58
GC content: 35.69
Gene sequence:
>1017_bases ATGTTAGCAAATCAGCTTATTGTTAGCGATATTAAAACCATTATTCATCGGGCTCGTGAGCAGGCGATTCGTTCGGTTGA TTTTCAGCGAGTCATTATGTATTGGCATATCGGAGAACGTATATTTAAAGAAGAACAACAAGAAAAAGAACGAGCCGAAT ATGGCAAATATTTAATTAAATCACTTGCCGCACAATTAGAACCCGAATATGGCAGTGGATTTTCTAAAAGACAATTAGAA CGTTATCGTCAGTTTTATCGTACATTCCCAATTGTGTCCGCACTGCGGACGCAATTAAATTGGACCCAATATAAGCTACT TTTAAGTATTCCGGATGAAGTTAAGAGAGAATTCTACATTGCGGAAACTGTAAAAAATAATTGGTCTTCTCGACAACTTG AACGCCAAATTTATAGTAACCTTTATGAACGTTTATTATTAAGTAATGATAAAGAAAGCGTTCTAGCCGTGGCGAAAAAT CAAATTATCCCTAATGATCCGAAACAAATTATTAAAGACCCGATTGTATTGGAATTCCTCGGGCTGAAACGAGAAAGTGC TTACTATGAAAAAGATTTGGAAAGTGCCATTTTAACTCATTTACAAGACTTCTTATTGGAACTGGGCAACGGTTTTTCTT TTGTGGCTCGTCAAAAACGATTACATATTGAAGGCGATGAATTTTTTGTTGATTTAGTATTATATAACCGTTTATTGCAG TGCTTTGTGCTGGTCGAAATCAAAACACATAAATTAACGCATCAAGATATCGGGCAATTACAGATGTATGTCAATTATTT TGATCGAATTGAAAAACTCCCTCATGAAACACCAACAATTGGTATTTTACTCTGTACGCATAAAAACGATGCTGTGGTAA AATTTACGCTGCCTGAACATCAGCAACAAATTTATGCGAGTCAATATCAGCTCTATCTACCGAGTGAGCAGCGGCTTTTA GAAGAAGTTCAGAAAGAGATTCAACAGTTCAAACAAAAACAGGAAGAAAACGATTAA
Upstream 100 bases:
>100_bases AAGGGCTATGGATAATCCCGATAGGATTTAGGGTTAATTGTGGTAAACTCATTGACTGTATTTATTTACAATATAATTAA AAAATTAAAAGGAGACAATT
Downstream 100 bases:
>100_bases TGGATAAACATTCCGCTTTTTCAATTTGGTTTACTACCGCTCGCCCAAGAACATTGCCTTTAGCGTTAGCCTCTATTATC GTCGGCTCGGCATTGGCATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MLANQLIVSDIKTIIHRAREQAIRSVDFQRVIMYWHIGERIFKEEQQEKERAEYGKYLIKSLAAQLEPEYGSGFSKRQLE RYRQFYRTFPIVSALRTQLNWTQYKLLLSIPDEVKREFYIAETVKNNWSSRQLERQIYSNLYERLLLSNDKESVLAVAKN QIIPNDPKQIIKDPIVLEFLGLKRESAYYEKDLESAILTHLQDFLLELGNGFSFVARQKRLHIEGDEFFVDLVLYNRLLQ CFVLVEIKTHKLTHQDIGQLQMYVNYFDRIEKLPHETPTIGILLCTHKNDAVVKFTLPEHQQQIYASQYQLYLPSEQRLL EEVQKEIQQFKQKQEEND
Sequences:
>Translated_338_residues MLANQLIVSDIKTIIHRAREQAIRSVDFQRVIMYWHIGERIFKEEQQEKERAEYGKYLIKSLAAQLEPEYGSGFSKRQLE RYRQFYRTFPIVSALRTQLNWTQYKLLLSIPDEVKREFYIAETVKNNWSSRQLERQIYSNLYERLLLSNDKESVLAVAKN QIIPNDPKQIIKDPIVLEFLGLKRESAYYEKDLESAILTHLQDFLLELGNGFSFVARQKRLHIEGDEFFVDLVLYNRLLQ CFVLVEIKTHKLTHQDIGQLQMYVNYFDRIEKLPHETPTIGILLCTHKNDAVVKFTLPEHQQQIYASQYQLYLPSEQRLL EEVQKEIQQFKQKQEEND >Mature_338_residues MLANQLIVSDIKTIIHRAREQAIRSVDFQRVIMYWHIGERIFKEEQQEKERAEYGKYLIKSLAAQLEPEYGSGFSKRQLE RYRQFYRTFPIVSALRTQLNWTQYKLLLSIPDEVKREFYIAETVKNNWSSRQLERQIYSNLYERLLLSNDKESVLAVAKN QIIPNDPKQIIKDPIVLEFLGLKRESAYYEKDLESAILTHLQDFLLELGNGFSFVARQKRLHIEGDEFFVDLVLYNRLLQ CFVLVEIKTHKLTHQDIGQLQMYVNYFDRIEKLPHETPTIGILLCTHKNDAVVKFTLPEHQQQIYASQYQLYLPSEQRLL EEVQKEIQQFKQKQEEND
Specific function: Unknown
COG id: COG4804
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789614, Length=354, Percent_Identity=38.7005649717514, Blast_Score=227, Evalue=8e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009362 [H]
Pfam domain/function: PF06250 DUF1016 [H]
EC number: NA
Molecular weight: Translated: 40281; Mature: 40281
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLANQLIVSDIKTIIHRAREQAIRSVDFQRVIMYWHIGERIFKEEQQEKERAEYGKYLIK CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLAAQLEPEYGSGFSKRQLERYRQFYRTFPIVSALRTQLNWTQYKLLLSIPDEVKREFYI HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEECCHHHHHHHHH AETVKNNWSSRQLERQIYSNLYERLLLSNDKESVLAVAKNQIIPNDPKQIIKDPIVLEFL HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHCCCHHHHHH GLKRESAYYEKDLESAILTHLQDFLLELGNGFSFVARQKRLHIEGDEFFVDLVLYNRLLQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCEECCHHHHHHHHHHHHHHH CFVLVEIKTHKLTHQDIGQLQMYVNYFDRIEKLPHETPTIGILLCTHKNDAVVKFTLPEH HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEECCHH QQQIYASQYQLYLPSEQRLLEEVQKEIQQFKQKQEEND HHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLANQLIVSDIKTIIHRAREQAIRSVDFQRVIMYWHIGERIFKEEQQEKERAEYGKYLIK CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SLAAQLEPEYGSGFSKRQLERYRQFYRTFPIVSALRTQLNWTQYKLLLSIPDEVKREFYI HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEECCHHHHHHHHH AETVKNNWSSRQLERQIYSNLYERLLLSNDKESVLAVAKNQIIPNDPKQIIKDPIVLEFL HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHCCCHHHHHH GLKRESAYYEKDLESAILTHLQDFLLELGNGFSFVARQKRLHIEGDEFFVDLVLYNRLLQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCEECCHHHHHHHHHHHHHHH CFVLVEIKTHKLTHQDIGQLQMYVNYFDRIEKLPHETPTIGILLCTHKNDAVVKFTLPEH HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCEEEEEECCHH QQQIYASQYQLYLPSEQRLLEEVQKEIQQFKQKQEEND HHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]