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The map label for this gene is yvdB [H]

Identifier: 126208646

GI number: 126208646

Start: 1354158

End: 1355714

Strand: Direct

Name: yvdB [H]

Synonym: APL_1178

Alternate gene names: 126208646

Gene position: 1354158-1355714 (Clockwise)

Preceding gene: 126208640

Following gene: 126208649

Centisome position: 59.54

GC content: 43.29

Gene sequence:

>1557_bases
ATGATTTCCGAAAAAGATAAAACCCGTTTATTTAAACAAAATTTTGCCTCCGGTTTAGTCGTATTTTTAGTCGCCTTACC
TCTATGCCTCGGTATCGCATTGGCGTCTGGCGCACCGCCGCTTTCGGGAGTCGTATCAGGTATTATCGGCGGTATTGTTA
TCGGCGCATTGAGTTCGTCACATATCAGCGTGGCAGGGCCTGCCGCCGGGTTGGTTGCGATTGTGCTTGCGGCGATTACT
CAATTAGGCTCATTCGAATTATTTCTTTGCGCGGGTATCATCGCCGGCGTTATTCAACTCTCGCTCGGTTTTTTACGTGC
CGGCAGTATTACCAACTATATTCCGATTGCAGTGATTGAAGGGATGTTAGCCGGTATCGGTATTTTAATTATTTTCTCGC
AACTGCCGTACGCATTGGGGAATAAACAATTCTTCCAAGAACTGAGCCAATCCTTTATTAATATTCATCTAGGCTCGTTC
AGCATTGCTCTGCTTTCGCTGTTTCTTATGTTGGGTTGGGACTCTTCCCCTACTCTTAAAAAAATTAAAATGCTTCCTTC
GGCATTAATTGCAGTCATTATCAGTATTTGTCTGAATCGCTTATTTATCGGTATGGACAGCTCACTAGCCATTCCTGCAA
CACAGCTCGTCCAGTTACCGATTCCTAATTCTTGGGCGGAAATGAGCGATTTAATTCGTTTTCCGGATTTTGCCGGTTTC
AGTTCGTCAATTGTCTGGGTAACCGGTGCAACCATGGCGATTGTCGCCTCAATCGAAACGTTATTATCAATTGAAGCCGC
CGACCGTTTAGACAGTAAACGCCGCATTACCGATACCAACCAAGAATTACGCGCGCAAGGGGTGGGCAATATTGTTTCTT
CCGTATTAGGCGGCTTACCGATTACTGCCGTGATCGTACGTTCTTCCGCTAACGCCAATGCCGGTGCAACCCACAAATTA
TCCAGTATCATTCACGGTGTTTTATTGTTGGTCTGTGTTTTAGCGATTCCGAGCATTTTAAATCAAATTCCGCTAGCCAC
TTTATCTGCCGTCTTAATTTTGGTCGGTTATAAATTGGCTCGTCCAACGGTTTTCAAACACTTCTGGCATAAAGGGATTT
ATCAATTTATTCCGTTTGTGGCAACGGCAGCGGCAGTGGTAGCGTTTGATTTACTCAAAGGGGTCGGATTGGGCTTAGTG
ATTAGTATTATCTTTTTATTACAAGGTAATATGAAGCGAGCTTACTATTTAAGCCGTGAAGAATTGGAAGACGCAAGTTA
CATCAAAATGCAGCTTTCCGAAGAAGTTTCTTTCTTAAATAAAGCGGCGATTAAAAAGACCTTAAAAAATATTCGCCCGA
ATTCTAAAGTGATTATTGACGCCTCTCGCACCTCTTACATTGCTTCGGACGTATTAGAATTAATTGAAGATTTCGCCAAT
ATTACCGCACGAGAAAATCATATTCGTGTTTATTTGAAAGGCTTTAAATCCGATTACAATAACCAAGAAATCGACCACGC
CAGCCACGTCAAAGTGGAACACGGCAGCCGAATTTAG

Upstream 100 bases:

>100_bases
TGCCGGTAAAAGGCGTAGAATATATTTCGCACTTTAGTCATTGTGCTAAAGCATGCTCGAAATATAGAAATAAAAAATAT
AGAAATAAGTGGTACCCATA

Downstream 100 bases:

>100_bases
ATATTATTCTGAACCACGGAAAATACCGAATACACAGAATAAAAGAGAATTTGTCGTGCGTAGGCTACAAATAAACAAGC
GGTCTGATTTTGCAAATTTC

Product: putative integral membrane sulfate transporter

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 518; Mature: 518

Protein sequence:

>518_residues
MISEKDKTRLFKQNFASGLVVFLVALPLCLGIALASGAPPLSGVVSGIIGGIVIGALSSSHISVAGPAAGLVAIVLAAIT
QLGSFELFLCAGIIAGVIQLSLGFLRAGSITNYIPIAVIEGMLAGIGILIIFSQLPYALGNKQFFQELSQSFINIHLGSF
SIALLSLFLMLGWDSSPTLKKIKMLPSALIAVIISICLNRLFIGMDSSLAIPATQLVQLPIPNSWAEMSDLIRFPDFAGF
SSSIVWVTGATMAIVASIETLLSIEAADRLDSKRRITDTNQELRAQGVGNIVSSVLGGLPITAVIVRSSANANAGATHKL
SSIIHGVLLLVCVLAIPSILNQIPLATLSAVLILVGYKLARPTVFKHFWHKGIYQFIPFVATAAAVVAFDLLKGVGLGLV
ISIIFLLQGNMKRAYYLSREELEDASYIKMQLSEEVSFLNKAAIKKTLKNIRPNSKVIIDASRTSYIASDVLELIEDFAN
ITARENHIRVYLKGFKSDYNNQEIDHASHVKVEHGSRI

Sequences:

>Translated_518_residues
MISEKDKTRLFKQNFASGLVVFLVALPLCLGIALASGAPPLSGVVSGIIGGIVIGALSSSHISVAGPAAGLVAIVLAAIT
QLGSFELFLCAGIIAGVIQLSLGFLRAGSITNYIPIAVIEGMLAGIGILIIFSQLPYALGNKQFFQELSQSFINIHLGSF
SIALLSLFLMLGWDSSPTLKKIKMLPSALIAVIISICLNRLFIGMDSSLAIPATQLVQLPIPNSWAEMSDLIRFPDFAGF
SSSIVWVTGATMAIVASIETLLSIEAADRLDSKRRITDTNQELRAQGVGNIVSSVLGGLPITAVIVRSSANANAGATHKL
SSIIHGVLLLVCVLAIPSILNQIPLATLSAVLILVGYKLARPTVFKHFWHKGIYQFIPFVATAAAVVAFDLLKGVGLGLV
ISIIFLLQGNMKRAYYLSREELEDASYIKMQLSEEVSFLNKAAIKKTLKNIRPNSKVIIDASRTSYIASDVLELIEDFAN
ITARENHIRVYLKGFKSDYNNQEIDHASHVKVEHGSRI
>Mature_518_residues
MISEKDKTRLFKQNFASGLVVFLVALPLCLGIALASGAPPLSGVVSGIIGGIVIGALSSSHISVAGPAAGLVAIVLAAIT
QLGSFELFLCAGIIAGVIQLSLGFLRAGSITNYIPIAVIEGMLAGIGILIIFSQLPYALGNKQFFQELSQSFINIHLGSF
SIALLSLFLMLGWDSSPTLKKIKMLPSALIAVIISICLNRLFIGMDSSLAIPATQLVQLPIPNSWAEMSDLIRFPDFAGF
SSSIVWVTGATMAIVASIETLLSIEAADRLDSKRRITDTNQELRAQGVGNIVSSVLGGLPITAVIVRSSANANAGATHKL
SSIIHGVLLLVCVLAIPSILNQIPLATLSAVLILVGYKLARPTVFKHFWHKGIYQFIPFVATAAAVVAFDLLKGVGLGLV
ISIIFLLQGNMKRAYYLSREELEDASYIKMQLSEEVSFLNKAAIKKTLKNIRPNSKVIIDASRTSYIASDVLELIEDFAN
ITARENHIRVYLKGFKSDYNNQEIDHASHVKVEHGSRI

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Homo sapiens, GI262206105, Length=550, Percent_Identity=23.2727272727273, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI262206075, Length=550, Percent_Identity=23.2727272727273, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI262206069, Length=550, Percent_Identity=23.2727272727273, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI262206063, Length=550, Percent_Identity=23.2727272727273, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI16306483, Length=359, Percent_Identity=24.7910863509749, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI20336282, Length=359, Percent_Identity=24.7910863509749, Blast_Score=67, Evalue=4e-11,
Organism=Escherichia coli, GI87081859, Length=446, Percent_Identity=28.2511210762332, Blast_Score=117, Evalue=2e-27,
Organism=Caenorhabditis elegans, GI17551690, Length=509, Percent_Identity=21.2180746561886, Blast_Score=73, Evalue=5e-13,
Organism=Saccharomyces cerevisiae, GI6325260, Length=556, Percent_Identity=22.6618705035971, Blast_Score=74, Evalue=8e-14,
Organism=Drosophila melanogaster, GI85815873, Length=514, Percent_Identity=24.9027237354086, Blast_Score=97, Evalue=4e-20,
Organism=Drosophila melanogaster, GI24647160, Length=490, Percent_Identity=21.0204081632653, Blast_Score=81, Evalue=2e-15,
Organism=Drosophila melanogaster, GI21355087, Length=490, Percent_Identity=21.0204081632653, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24649801, Length=504, Percent_Identity=22.8174603174603, Blast_Score=80, Evalue=5e-15,
Organism=Drosophila melanogaster, GI19922482, Length=457, Percent_Identity=22.5382932166302, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 55491; Mature: 55491

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISEKDKTRLFKQNFASGLVVFLVALPLCLGIALASGAPPLSGVVSGIIGGIVIGALSSS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
HISVAGPAAGLVAIVLAAITQLGSFELFLCAGIIAGVIQLSLGFLRAGSITNYIPIAVIE
CEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
GMLAGIGILIIFSQLPYALGNKQFFQELSQSFINIHLGSFSIALLSLFLMLGWDSSPTLK
HHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHH
KIKMLPSALIAVIISICLNRLFIGMDSSLAIPATQLVQLPIPNSWAEMSDLIRFPDFAGF
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEECCCCCCHHHHHHHHHCCCCCCC
SSSIVWVTGATMAIVASIETLLSIEAADRLDSKRRITDTNQELRAQGVGNIVSSVLGGLP
CCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
ITAVIVRSSANANAGATHKLSSIIHGVLLLVCVLAIPSILNQIPLATLSAVLILVGYKLA
HHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
RPTVFKHFWHKGIYQFIPFVATAAAVVAFDLLKGVGLGLVISIIFLLQGNMKRAYYLSRE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHCCCHH
ELEDASYIKMQLSEEVSFLNKAAIKKTLKNIRPNSKVIIDASRTSYIASDVLELIEDFAN
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHH
ITARENHIRVYLKGFKSDYNNQEIDHASHVKVEHGSRI
CCCCCCCEEEEEEHHHCCCCCCCCCCCCCEEECCCCCC
>Mature Secondary Structure
MISEKDKTRLFKQNFASGLVVFLVALPLCLGIALASGAPPLSGVVSGIIGGIVIGALSSS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCC
HISVAGPAAGLVAIVLAAITQLGSFELFLCAGIIAGVIQLSLGFLRAGSITNYIPIAVIE
CEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH
GMLAGIGILIIFSQLPYALGNKQFFQELSQSFINIHLGSFSIALLSLFLMLGWDSSPTLK
HHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHH
KIKMLPSALIAVIISICLNRLFIGMDSSLAIPATQLVQLPIPNSWAEMSDLIRFPDFAGF
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEECCCCCCHHHHHHHHHCCCCCCC
SSSIVWVTGATMAIVASIETLLSIEAADRLDSKRRITDTNQELRAQGVGNIVSSVLGGLP
CCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
ITAVIVRSSANANAGATHKLSSIIHGVLLLVCVLAIPSILNQIPLATLSAVLILVGYKLA
HHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
RPTVFKHFWHKGIYQFIPFVATAAAVVAFDLLKGVGLGLVISIIFLLQGNMKRAYYLSRE
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHCCCHH
ELEDASYIKMQLSEEVSFLNKAAIKKTLKNIRPNSKVIIDASRTSYIASDVLELIEDFAN
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHH
ITARENHIRVYLKGFKSDYNNQEIDHASHVKVEHGSRI
CCCCCCCEEEEEEHHHCCCCCCCCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]