Definition Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome.
Accession NC_009053
Length 2,274,482

Click here to switch to the map view.

The map label for this gene is ftnA [H]

Identifier: 126208541

GI number: 126208541

Start: 1237828

End: 1238334

Strand: Direct

Name: ftnA [H]

Synonym: APL_1069

Alternate gene names: 126208541

Gene position: 1237828-1238334 (Clockwise)

Preceding gene: 126208540

Following gene: 126208542

Centisome position: 54.42

GC content: 36.29

Gene sequence:

>507_bases
ATGTTACAACAAAAAATCATTGATCAACTCAATGAACAAATTAACCTAGAGTTCTACTCTTCAAACGTTTATCTGCAAAT
GTCGTCATGGTGCTCAAAAAACGGTTTTGCCGGTGCGGCAAACTTCTTACTTCGTCATGCAGATGAAGAATTAGAACATA
TGCAAAAATTATTTAACTATGTAAGTGAAACCGGCGGCTTACCGTTACTCGGTAAAATTGAAGCGCCTCGTAAAGAATAT
GCTTCATTAAAAGAGCTATTTGATGAAGTGCTTGCGCATGAAAAACACGTTACTGCAAAAATCAATGAATTAGTTGAAGT
GACATTCGCCGCAAAAGATTATTCAACCTTTAACTTCTTACAATGGTATGTTGCAGAACAACATGAAGAAGAAAAATTAT
TCGGTGAGATTTTAGACAAGTTTGCAGTGGCAGGCGAAGGCAATAAATCACTCTACTTCATCGATAAAGACTTAGAAACT
TTAGATCACGAACAAGGAGCTGCATAA

Upstream 100 bases:

>100_bases
CAAAGGGGTGGAATTTTTCCGCCCCTTTGTCGTATCCGGATTTCGTAATGAAATTAGCTCTCATTATTTAAAATCTTTTA
ATATTAGATTGGAGGTAAAA

Downstream 100 bases:

>100_bases
TGTTATCACCGGCAATCATCAAACAATTAAACGACCAATTAAACTTAGAATTTTATTCTTCAAACGTTTATCTACAAATG
TCGGCATGGGCGGATAACAA

Product: ferritin-like protein 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MLQQKIIDQLNEQINLEFYSSNVYLQMSSWCSKNGFAGAANFLLRHADEELEHMQKLFNYVSETGGLPLLGKIEAPRKEY
ASLKELFDEVLAHEKHVTAKINELVEVTFAAKDYSTFNFLQWYVAEQHEEEKLFGEILDKFAVAGEGNKSLYFIDKDLET
LDHEQGAA

Sequences:

>Translated_168_residues
MLQQKIIDQLNEQINLEFYSSNVYLQMSSWCSKNGFAGAANFLLRHADEELEHMQKLFNYVSETGGLPLLGKIEAPRKEY
ASLKELFDEVLAHEKHVTAKINELVEVTFAAKDYSTFNFLQWYVAEQHEEEKLFGEILDKFAVAGEGNKSLYFIDKDLET
LDHEQGAA
>Mature_168_residues
MLQQKIIDQLNEQINLEFYSSNVYLQMSSWCSKNGFAGAANFLLRHADEELEHMQKLFNYVSETGGLPLLGKIEAPRKEY
ASLKELFDEVLAHEKHVTAKINELVEVTFAAKDYSTFNFLQWYVAEQHEEEKLFGEILDKFAVAGEGNKSLYFIDKDLET
LDHEQGAA

Specific function: Iron-storage protein [H]

COG id: COG1528

COG function: function code P; Ferritin-like protein

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ferritin-like diiron domain [H]

Homologues:

Organism=Escherichia coli, GI1788216, Length=162, Percent_Identity=58.0246913580247, Blast_Score=204, Evalue=2e-54,
Organism=Escherichia coli, GI1788212, Length=136, Percent_Identity=33.8235294117647, Blast_Score=92, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009040
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR008331
- InterPro:   IPR001519 [H]

Pfam domain/function: PF00210 Ferritin [H]

EC number: =1.16.3.1 [H]

Molecular weight: Translated: 19287; Mature: 19287

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: PS50905 FERRITIN_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQQKIIDQLNEQINLEFYSSNVYLQMSSWCSKNGFAGAANFLLRHADEELEHMQKLFNY
CCHHHHHHHHHHHCCEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VSETGGLPLLGKIEAPRKEYASLKELFDEVLAHEKHVTAKINELVEVTFAAKDYSTFNFL
HHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHH
QWYVAEQHEEEKLFGEILDKFAVAGEGNKSLYFIDKDLETLDHEQGAA
HHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHCCCCC
>Mature Secondary Structure
MLQQKIIDQLNEQINLEFYSSNVYLQMSSWCSKNGFAGAANFLLRHADEELEHMQKLFNY
CCHHHHHHHHHHHCCEEEECCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
VSETGGLPLLGKIEAPRKEYASLKELFDEVLAHEKHVTAKINELVEVTFAAKDYSTFNFL
HHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHHHHH
QWYVAEQHEEEKLFGEILDKFAVAGEGNKSLYFIDKDLETLDHEQGAA
HHHHHHHCHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]