| Definition | Actinobacillus pleuropneumoniae serovar 5b str. L20 chromosome, complete genome. |
|---|---|
| Accession | NC_009053 |
| Length | 2,274,482 |
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The map label for this gene is ftnB [H]
Identifier: 126208542
GI number: 126208542
Start: 1238334
End: 1238831
Strand: Direct
Name: ftnB [H]
Synonym: APL_1070
Alternate gene names: 126208542
Gene position: 1238334-1238831 (Clockwise)
Preceding gene: 126208541
Following gene: 126208543
Centisome position: 54.44
GC content: 37.75
Gene sequence:
>498_bases ATGTTATCACCGGCAATCATCAAACAATTAAACGACCAATTAAACTTAGAATTTTATTCTTCAAACGTTTATCTACAAAT GTCGGCATGGGCGGATAACAACGGCTTCCCGGGTGCGGCGAAATTCTTAAAAGCGCACGCCACCGAAGAAATGGAACATA TGCGCCGCTTATTCACCTATTTAAACGAAACCGGTTCGTTAGCGGAGATTTATGCAATTGAAGCACCGCAAGCAGAATAT GCTTCGTTAAAATCTTTGTTTGAAATCGTATTGGAACATGAAAAACACGTCACAGCTTCAATCAATAAACTGGTGGAAGT CACTTTTGAAGCAAAAGATTACTCATCGTTTAATTTCTTACAATGGTATGTGGCTGAACAGCACGAAGAAGAATTCCTAT TTAATTCGATTTTAAATAAATTTAAACTGTTAGGCGAAGACGGCAAAGCGTTATACTACATTGATAAAGATTTAGAACAA CTTGCATCAGCGCACTAA
Upstream 100 bases:
>100_bases AGATTTTAGACAAGTTTGCAGTGGCAGGCGAAGGCAATAAATCACTCTACTTCATCGATAAAGACTTAGAAACTTTAGAT CACGAACAAGGAGCTGCATA
Downstream 100 bases:
>100_bases TTAATTCGTTTACAAGCGGTCAAATTTCCCTAAAATTTTGCAACTTGTGACCACAGAATACACGGGCTTCACAAAAATTA TTTTAGTGAAGTCCGTTCTT
Product: ferritin-like protein 2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MLSPAIIKQLNDQLNLEFYSSNVYLQMSAWADNNGFPGAAKFLKAHATEEMEHMRRLFTYLNETGSLAEIYAIEAPQAEY ASLKSLFEIVLEHEKHVTASINKLVEVTFEAKDYSSFNFLQWYVAEQHEEEFLFNSILNKFKLLGEDGKALYYIDKDLEQ LASAH
Sequences:
>Translated_165_residues MLSPAIIKQLNDQLNLEFYSSNVYLQMSAWADNNGFPGAAKFLKAHATEEMEHMRRLFTYLNETGSLAEIYAIEAPQAEY ASLKSLFEIVLEHEKHVTASINKLVEVTFEAKDYSSFNFLQWYVAEQHEEEFLFNSILNKFKLLGEDGKALYYIDKDLEQ LASAH >Mature_165_residues MLSPAIIKQLNDQLNLEFYSSNVYLQMSAWADNNGFPGAAKFLKAHATEEMEHMRRLFTYLNETGSLAEIYAIEAPQAEY ASLKSLFEIVLEHEKHVTASINKLVEVTFEAKDYSSFNFLQWYVAEQHEEEFLFNSILNKFKLLGEDGKALYYIDKDLEQ LASAH
Specific function: Iron-storage protein [H]
COG id: COG1528
COG function: function code P; Ferritin-like protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ferritin-like diiron domain [H]
Homologues:
Organism=Escherichia coli, GI1788216, Length=163, Percent_Identity=53.3742331288344, Blast_Score=182, Evalue=7e-48, Organism=Escherichia coli, GI1788212, Length=142, Percent_Identity=30.9859154929577, Blast_Score=90, Evalue=6e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009040 - InterPro: IPR012347 - InterPro: IPR009078 - InterPro: IPR008331 - InterPro: IPR001519 [H]
Pfam domain/function: PF00210 Ferritin [H]
EC number: =1.16.3.1 [H]
Molecular weight: Translated: 19013; Mature: 19013
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: PS50905 FERRITIN_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSPAIIKQLNDQLNLEFYSSNVYLQMSAWADNNGFPGAAKFLKAHATEEMEHMRRLFTY CCCHHHHHHCCHHCCEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LNETGSLAEIYAIEAPQAEYASLKSLFEIVLEHEKHVTASINKLVEVTFEAKDYSSFNFL HCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEECCCCCCCCHHH QWYVAEQHEEEFLFNSILNKFKLLGEDGKALYYIDKDLEQLASAH HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHCCC >Mature Secondary Structure MLSPAIIKQLNDQLNLEFYSSNVYLQMSAWADNNGFPGAAKFLKAHATEEMEHMRRLFTY CCCHHHHHHCCHHCCEEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LNETGSLAEIYAIEAPQAEYASLKSLFEIVLEHEKHVTASINKLVEVTFEAKDYSSFNFL HCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHEEECCCCCCCCHHH QWYVAEQHEEEFLFNSILNKFKLLGEDGKALYYIDKDLEQLASAH HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]