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The map label for this gene is yidE [C]

Identifier: 126208440

GI number: 126208440

Start: 1118814

End: 1120472

Strand: Reverse

Name: yidE [C]

Synonym: APL_0966

Alternate gene names: 126208440

Gene position: 1120472-1118814 (Counterclockwise)

Preceding gene: 126208442

Following gene: 126208439

Centisome position: 49.26

GC content: 43.16

Gene sequence:

>1659_bases
ATGAGCGATATAGCCATTATTGTAAGCCTATTATCATTAGTTGCGGTATTAGGTTTATGGATTGGTCATATAAAAATCAA
AGGGGTCGGTCTCGGTATCGGCGGAGTATTATTCGGTGGGATCATTATTTCTCATTGTACTCATTTGTACGGTATCGAAT
TGGATGCGCACACGTTACATTTTATTCAAGAGTTCGGATTAATTCTGTTTGTTTACTCAATCGGTATTCAGGTTGGTCCG
GGCTTTTTTGCGTCATTGCGTCAATCGGGTTTAAAACTGAACGGCTTTGCGGTGATGATTGTCGGGCTAAGCGGAATACT
TGTTGCGCTCATTCATAAGTTATTCGATGTTCCTTTACCGGTGATTTTAGGTATTTTCTCCGGTGCGGTAACCAATACGC
CGTCTTTAGGGGCGGGGCAACAAGTATTAACCGAGCTTGGCGGAGACAATATTACGGCGGTAATGGGGATGAGTTATGCG
ATTGCTTATCCGTTCGGGATTATCGGTATTTTACTTTCTATGTGGTTGATTCGTATCATTTTTAAGGTGAATATCGATAA
AGAAGCGCAAGAGTTCGATAACAATCAAAATCAGCAGAAAGAAGGATTGGATACGCTTAACGTACGTTTAACCAACCCTA
ATTTAGGCGGTTTAAAATTAAAGGAAATCCCTGATTTTGAATCGCATACGGTTATTTATTCCCGTTTGAAACGGAATGAC
CAATTGATTGTGCCGAATGTCGATACAGTCTTAAATGTCGGAGATGTGCTTCACTTAGTCGGAGAAAAAGCGACGTTACG
TAAAATGCAGCTTATTTTAGGAGAAGAAGCGGACGTATCCGTTTCGACCAGAGGTACGATTTTCCGTTCCGAGCGGGCGG
TAGTTACCAATGAAAACGTATTTGGTAAAAAAATCCGTCATTTAATGCTGAAAGGGAAATATGAAGTTGTGATTTCTCGT
TTAAACCGTGCGGGGGTCGAATTAATTCCGAACGGTGAAATGGCATTACAATTCGGGGACGTACTGAACTTAGTCGGACG
TCAGGAAGATATTGAAACGGTGCGTGCGATTATTGGCGATGCGCATCAAAAACTACAGCAAGTTCAAATGTTGCCGATTT
TTGTCGGGATTGGATTAGGTGTTTTGCTCGGTTCATTACCGCTTTATATTCCGGGATTTCCGGTGGCGTTAAAATTAGGT
TTAGCCGGCGGTCCGTTGGTGGTAGCTTTAATTCTTGCGAGAATCGGCAGTATCGGTAAACTTTATTGGTTTATGCCGCC
GAGTGCCAACTTGGCATTGCGAGAAATCGGTATCGTATTATTCCTTTCCGTAGTCGGTTTAAAAGCCGGGGCGAATTTCC
TCGATACTTTACTCAGTCCGGAAGGGCTTGCATGGATGGGATACGGTGCGATCATCACCTTTATTCCATTGATTGTGACC
GGATTTGTTGCTCGTATTTACGGAAAAATGAATTATTTATCGCTATGCGGTTTGTTATCCGGTGCGATGACCGATCCGCC
GGCATTGGCTTTTGCCAATGAAATTAAAGACGGACACGGTGCGGCGGCACTTTCCTATGCAACGGTCTATCCGCTTGTGA
TGTTCTTACGTATCATCTTACCGCAATTACTTGCCATTTTGCTTTGGACGGCAAGCTAA

Upstream 100 bases:

>100_bases
ATTATCCGCTTCGCAATTGCGAATTTCTTGAATCAGTTCTCATTTTTTTAAATATGCATTTGTTAAAATTTAAGAAGTAA
TTTTTTTATTGGAGGCGAAA

Downstream 100 bases:

>100_bases
ATCCGTCATCATCGATAGCGGTCGAATTTAACGAGATTTTTGTAAAATTCTCAATGAATCCGACCGCTATTTTCATTTCT
TCTCTGTTCAGCAAATCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 552; Mature: 551

Protein sequence:

>552_residues
MSDIAIIVSLLSLVAVLGLWIGHIKIKGVGLGIGGVLFGGIIISHCTHLYGIELDAHTLHFIQEFGLILFVYSIGIQVGP
GFFASLRQSGLKLNGFAVMIVGLSGILVALIHKLFDVPLPVILGIFSGAVTNTPSLGAGQQVLTELGGDNITAVMGMSYA
IAYPFGIIGILLSMWLIRIIFKVNIDKEAQEFDNNQNQQKEGLDTLNVRLTNPNLGGLKLKEIPDFESHTVIYSRLKRND
QLIVPNVDTVLNVGDVLHLVGEKATLRKMQLILGEEADVSVSTRGTIFRSERAVVTNENVFGKKIRHLMLKGKYEVVISR
LNRAGVELIPNGEMALQFGDVLNLVGRQEDIETVRAIIGDAHQKLQQVQMLPIFVGIGLGVLLGSLPLYIPGFPVALKLG
LAGGPLVVALILARIGSIGKLYWFMPPSANLALREIGIVLFLSVVGLKAGANFLDTLLSPEGLAWMGYGAIITFIPLIVT
GFVARIYGKMNYLSLCGLLSGAMTDPPALAFANEIKDGHGAAALSYATVYPLVMFLRIILPQLLAILLWTAS

Sequences:

>Translated_552_residues
MSDIAIIVSLLSLVAVLGLWIGHIKIKGVGLGIGGVLFGGIIISHCTHLYGIELDAHTLHFIQEFGLILFVYSIGIQVGP
GFFASLRQSGLKLNGFAVMIVGLSGILVALIHKLFDVPLPVILGIFSGAVTNTPSLGAGQQVLTELGGDNITAVMGMSYA
IAYPFGIIGILLSMWLIRIIFKVNIDKEAQEFDNNQNQQKEGLDTLNVRLTNPNLGGLKLKEIPDFESHTVIYSRLKRND
QLIVPNVDTVLNVGDVLHLVGEKATLRKMQLILGEEADVSVSTRGTIFRSERAVVTNENVFGKKIRHLMLKGKYEVVISR
LNRAGVELIPNGEMALQFGDVLNLVGRQEDIETVRAIIGDAHQKLQQVQMLPIFVGIGLGVLLGSLPLYIPGFPVALKLG
LAGGPLVVALILARIGSIGKLYWFMPPSANLALREIGIVLFLSVVGLKAGANFLDTLLSPEGLAWMGYGAIITFIPLIVT
GFVARIYGKMNYLSLCGLLSGAMTDPPALAFANEIKDGHGAAALSYATVYPLVMFLRIILPQLLAILLWTAS
>Mature_551_residues
SDIAIIVSLLSLVAVLGLWIGHIKIKGVGLGIGGVLFGGIIISHCTHLYGIELDAHTLHFIQEFGLILFVYSIGIQVGPG
FFASLRQSGLKLNGFAVMIVGLSGILVALIHKLFDVPLPVILGIFSGAVTNTPSLGAGQQVLTELGGDNITAVMGMSYAI
AYPFGIIGILLSMWLIRIIFKVNIDKEAQEFDNNQNQQKEGLDTLNVRLTNPNLGGLKLKEIPDFESHTVIYSRLKRNDQ
LIVPNVDTVLNVGDVLHLVGEKATLRKMQLILGEEADVSVSTRGTIFRSERAVVTNENVFGKKIRHLMLKGKYEVVISRL
NRAGVELIPNGEMALQFGDVLNLVGRQEDIETVRAIIGDAHQKLQQVQMLPIFVGIGLGVLLGSLPLYIPGFPVALKLGL
AGGPLVVALILARIGSIGKLYWFMPPSANLALREIGIVLFLSVVGLKAGANFLDTLLSPEGLAWMGYGAIITFIPLIVTG
FVARIYGKMNYLSLCGLLSGAMTDPPALAFANEIKDGHGAAALSYATVYPLVMFLRIILPQLLAILLWTAS

Specific function: Unknown

COG id: COG2985

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI87082315, Length=551, Percent_Identity=64.6098003629764, Blast_Score=716, Evalue=0.0,
Organism=Escherichia coli, GI1787071, Length=570, Percent_Identity=24.5614035087719, Blast_Score=129, Evalue=7e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006037
- InterPro:   IPR023018
- InterPro:   IPR006512 [H]

Pfam domain/function: PF06826 Asp-Al_Ex; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 59409; Mature: 59277

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDIAIIVSLLSLVAVLGLWIGHIKIKGVGLGIGGVLFGGIIISHCTHLYGIELDAHTLH
CCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHHHHHEEEECHHHHH
FIQEFGLILFVYSIGIQVGPGFFASLRQSGLKLNGFAVMIVGLSGILVALIHKLFDVPLP
HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEECCCEEEEHHHHHHHHHHHHHHHHCCHH
VILGIFSGAVTNTPSLGAGQQVLTELGGDNITAVMGMSYAIAYPFGIIGILLSMWLIRII
HHHHHHHCCCCCCCCCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FKVNIDKEAQEFDNNQNQQKEGLDTLNVRLTNPNLGGLKLKEIPDFESHTVIYSRLKRND
HHCCCCHHHHHHCCCCCHHHCCCCEEEEEEECCCCCCEEECCCCCCCCHHHHHHHHCCCC
QLIVPNVDTVLNVGDVLHLVGEKATLRKMQLILGEEADVSVSTRGTIFRSERAVVTNENV
CEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEECCCCEEECCCEEEECCCH
FGKKIRHLMLKGKYEVVISRLNRAGVELIPNGEMALQFGDVLNLVGRQEDIETVRAIIGD
HHHHHHHHHHCCHHHHHHHHHHHCCCEEECCCCCEEHHHHHHHHHCCHHHHHHHHHHHHH
AHQKLQQVQMLPIFVGIGLGVLLGSLPLYIPGFPVALKLGLAGGPLVVALILARIGSIGK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCE
LYWFMPPSANLALREIGIVLFLSVVGLKAGANFLDTLLSPEGLAWMGYGAIITFIPLIVT
EEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEHHHHHHHHHHHHHH
GFVARIYGKMNYLSLCGLLSGAMTDPPALAFANEIKDGHGAAALSYATVYPLVMFLRIIL
HHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
PQLLAILLWTAS
HHHHHHHHHCCC
>Mature Secondary Structure 
SDIAIIVSLLSLVAVLGLWIGHIKIKGVGLGIGGVLFGGIIISHCTHLYGIELDAHTLH
CHHHHHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHHHHHEEEECHHHHH
FIQEFGLILFVYSIGIQVGPGFFASLRQSGLKLNGFAVMIVGLSGILVALIHKLFDVPLP
HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCEECCCEEEEHHHHHHHHHHHHHHHHCCHH
VILGIFSGAVTNTPSLGAGQQVLTELGGDNITAVMGMSYAIAYPFGIIGILLSMWLIRII
HHHHHHHCCCCCCCCCCCHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FKVNIDKEAQEFDNNQNQQKEGLDTLNVRLTNPNLGGLKLKEIPDFESHTVIYSRLKRND
HHCCCCHHHHHHCCCCCHHHCCCCEEEEEEECCCCCCEEECCCCCCCCHHHHHHHHCCCC
QLIVPNVDTVLNVGDVLHLVGEKATLRKMQLILGEEADVSVSTRGTIFRSERAVVTNENV
CEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEECCCCEEECCCEEEECCCH
FGKKIRHLMLKGKYEVVISRLNRAGVELIPNGEMALQFGDVLNLVGRQEDIETVRAIIGD
HHHHHHHHHHCCHHHHHHHHHHHCCCEEECCCCCEEHHHHHHHHHCCHHHHHHHHHHHHH
AHQKLQQVQMLPIFVGIGLGVLLGSLPLYIPGFPVALKLGLAGGPLVVALILARIGSIGK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCE
LYWFMPPSANLALREIGIVLFLSVVGLKAGANFLDTLLSPEGLAWMGYGAIITFIPLIVT
EEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCEEEHHHHHHHHHHHHHH
GFVARIYGKMNYLSLCGLLSGAMTDPPALAFANEIKDGHGAAALSYATVYPLVMFLRIIL
HHHHHHHHCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH
PQLLAILLWTAS
HHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA