Click here to switch to the map view.

The map label for this gene is yacL [C]

Identifier: 126208442

GI number: 126208442

Start: 1122022

End: 1122399

Strand: Reverse

Name: yacL [C]

Synonym: APL_0968

Alternate gene names: 126208442

Gene position: 1122399-1122022 (Counterclockwise)

Preceding gene: 126208443

Following gene: 126208440

Centisome position: 49.35

GC content: 35.98

Gene sequence:

>378_bases
ATGGAATATCAATTTACACATTCAATTCACGGCGTAGTCGCTAAATGTTCAATGGATCACGAAGCTTTTGCCGGTTGGTT
AAATACCGAGATAACGGAAAATCCTAAAGAGTTGATCAATATCTTTGCTGAAATTGAAAAATGTCGGGCGGCGTATCCTA
ATCATTATGAATGTGTCTTCGAGGGAAAAGAATACAGTTTATTTCTTGATTGCGATGAAGTGATGGTGAAAGCGAATAAT
CTGGACGATACGTTTGACGAATCGCAAATAGAAGACGGTTTTCAGTTTTATGATCAAGAAAGTATCGCATTTTGCGGCTT
AGAGGATTTTGAAAATTTCTTAAAAGCCTATCAGAAATTTAGTAAAACCTATCACTAA

Upstream 100 bases:

>100_bases
CTAAGATCAGAGAAGCGGTTAAATTTGCAAAAAATTTTGTCAATTTAACCGCTTGTTTTCCGCTATAATAAGGCAAATTT
ACCCATTCAAGGAGTTTGCA

Downstream 100 bases:

>100_bases
TGATTTAAGTAATAAAACAAAGAAGGGGAAACCGTAACGGTTGCCCCTTTGCTTTATTTGTTTAAACGATTAACGTAAGA
ACTCAACAAACCAAGTGATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 125; Mature: 125

Protein sequence:

>125_residues
MEYQFTHSIHGVVAKCSMDHEAFAGWLNTEITENPKELINIFAEIEKCRAAYPNHYECVFEGKEYSLFLDCDEVMVKANN
LDDTFDESQIEDGFQFYDQESIAFCGLEDFENFLKAYQKFSKTYH

Sequences:

>Translated_125_residues
MEYQFTHSIHGVVAKCSMDHEAFAGWLNTEITENPKELINIFAEIEKCRAAYPNHYECVFEGKEYSLFLDCDEVMVKANN
LDDTFDESQIEDGFQFYDQESIAFCGLEDFENFLKAYQKFSKTYH
>Mature_125_residues
MEYQFTHSIHGVVAKCSMDHEAFAGWLNTEITENPKELINIFAEIEKCRAAYPNHYECVFEGKEYSLFLDCDEVMVKANN
LDDTFDESQIEDGFQFYDQESIAFCGLEDFENFLKAYQKFSKTYH

Specific function: Unknown

COG id: COG3112

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0231 family [H]

Homologues:

Organism=Escherichia coli, GI87081687, Length=124, Percent_Identity=37.9032258064516, Blast_Score=85, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008249
- ProDom:   PD020773 [H]

Pfam domain/function: PF06062 UPF0231 [H]

EC number: NA

Molecular weight: Translated: 14657; Mature: 14657

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
4.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYQFTHSIHGVVAKCSMDHEAFAGWLNTEITENPKELINIFAEIEKCRAAYPNHYECVF
CCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEE
EGKEYSLFLDCDEVMVKANNLDDTFDESQIEDGFQFYDQESIAFCGLEDFENFLKAYQKF
ECCCEEEEEEHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHH
SKTYH
HHCCC
>Mature Secondary Structure
MEYQFTHSIHGVVAKCSMDHEAFAGWLNTEITENPKELINIFAEIEKCRAAYPNHYECVF
CCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEE
EGKEYSLFLDCDEVMVKANNLDDTFDESQIEDGFQFYDQESIAFCGLEDFENFLKAYQKF
ECCCEEEEEEHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHH
SKTYH
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA