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The map label for this gene is yfhP [C]

Identifier: 126208408

GI number: 126208408

Start: 1073111

End: 1073563

Strand: Reverse

Name: yfhP [C]

Synonym: APL_0932

Alternate gene names: 126208408

Gene position: 1073563-1073111 (Counterclockwise)

Preceding gene: 126208411

Following gene: 126208407

Centisome position: 47.2

GC content: 42.38

Gene sequence:

>453_bases
ATGAAATTAACGTCAAGAGGGCGTTATGCGGTAACTGCGATTCTAGATATTGCGTTACACGGAAAGTCTTTGCCGGTAAG
CCTTGCCGATATTTCGGAACGTCAAGCGATTTCATTGTCGTATTTGGAACAATTATTTGCTCAATTACGTCGCGAAGGAA
TCGTGCATAGCGTGAGAGGTCCGGGCGGCGGTTATCAACTCGGTAAGCAACCTGAAGAGATTAGTGTGGGGATGATTATT
GCGGCGGTGAATGAAAATCTCGACGTAACCAAATGTAAAGGTAGCGGCAACTGTAGCAAAAACTCTCAGTGCTTAACCCA
TCATTTATGGGAACGTTTAGAAGAACAAATCGGTGTGTTTTTAAATACGATTACTTTAGCGGAACTTGTTGAAGAACATT
CGGATCACGATTGTGAAAAAGAACATTGCCACGATCATTCACACAAACATTAA

Upstream 100 bases:

>100_bases
AGTGTGATAAGTGTAAAATTCTTGACTGTAACAGTCAGGTATATCAAAATTCACACCGTAAATCGATTACTATTTCCTTA
TTAAAAGAGGGACAAAAATT

Downstream 100 bases:

>100_bases
TTGCAACAATTTCAATAAAAACGACCGCTTATTTAAAGCGAGTTAGGAGTAACAATGTCAGTTAAATTACCTATCTATTT
AGATTATGCAGCAACTACGC

Product: putative HTH-type transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MKLTSRGRYAVTAILDIALHGKSLPVSLADISERQAISLSYLEQLFAQLRREGIVHSVRGPGGGYQLGKQPEEISVGMII
AAVNENLDVTKCKGSGNCSKNSQCLTHHLWERLEEQIGVFLNTITLAELVEEHSDHDCEKEHCHDHSHKH

Sequences:

>Translated_150_residues
MKLTSRGRYAVTAILDIALHGKSLPVSLADISERQAISLSYLEQLFAQLRREGIVHSVRGPGGGYQLGKQPEEISVGMII
AAVNENLDVTKCKGSGNCSKNSQCLTHHLWERLEEQIGVFLNTITLAELVEEHSDHDCEKEHCHDHSHKH
>Mature_150_residues
MKLTSRGRYAVTAILDIALHGKSLPVSLADISERQAISLSYLEQLFAQLRREGIVHSVRGPGGGYQLGKQPEEISVGMII
AAVNENLDVTKCKGSGNCSKNSQCLTHHLWERLEEQIGVFLNTITLAELVEEHSDHDCEKEHCHDHSHKH

Specific function: Unknown

COG id: COG1959

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH rrf2-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788880, Length=146, Percent_Identity=57.5342465753425, Blast_Score=164, Evalue=2e-42,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010242
- InterPro:   IPR000944
- InterPro:   IPR011991 [H]

Pfam domain/function: PF02082 Rrf2 [H]

EC number: NA

Molecular weight: Translated: 16661; Mature: 16661

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTSRGRYAVTAILDIALHGKSLPVSLADISERQAISLSYLEQLFAQLRREGIVHSVRG
CCCCCCCCCHHHHHHHHHHCCCCCCEEHHHCCCHHHHHHHHHHHHHHHHHHHCCEEECCC
PGGGYQLGKQPEEISVGMIIAAVNENLDVTKCKGSGNCSKNSQCLTHHLWERLEEQIGVF
CCCCCCCCCCCCHHHHEEEEEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LNTITLAELVEEHSDHDCEKEHCHDHSHKH
HHHHHHHHHHHHHCCCCCCHHHHCCCCCCC
>Mature Secondary Structure
MKLTSRGRYAVTAILDIALHGKSLPVSLADISERQAISLSYLEQLFAQLRREGIVHSVRG
CCCCCCCCCHHHHHHHHHHCCCCCCEEHHHCCCHHHHHHHHHHHHHHHHHHHCCEEECCC
PGGGYQLGKQPEEISVGMIIAAVNENLDVTKCKGSGNCSKNSQCLTHHLWERLEEQIGVF
CCCCCCCCCCCCHHHHEEEEEEECCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHH
LNTITLAELVEEHSDHDCEKEHCHDHSHKH
HHHHHHHHHHHHHCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]